Array 1 43990-44446 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZK01000020.1 Chimaeribacter arupi strain 2016-Iso1 NODE_20_length_91918_cov_37.1872_ID_5681, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 43990 29 100.0 32 ............................. GTCTTATTTTAAATTCGCTATAGTAGGAAATT 44051 29 100.0 32 ............................. ATAGGTTATTTATATTCTGCTAATAATATTAA 44112 29 100.0 32 ............................. AAAATAGTGAATGGCGTGTTGAAGGAATATTT 44173 29 100.0 32 ............................. CCGCCAACTAATAGCATGGTTGTAGCGCTTGA 44234 29 100.0 32 ............................. GTTCGGGTCATCTTCTTCCGTCAAAATCTTCA 44295 29 100.0 33 ............................. CCCGAGCCGATGATGATCTTGCCGTTCGCCAGC 44357 29 100.0 32 ............................. CGCGCGGCTCATCGGCAAAGGCGCGGCTTGGC 44418 29 82.8 0 .....................A..T.GAC | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.8 32 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : AGCGTTCCGGCGGTGATCGCCGTGAGCCGTGAGCCGCTGATTGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGCTGCGCCGCTATCTGTCGCACCTGGAGAAAGCGGTAGTGGTGTTGCTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTACATCGTGCTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCTGCTAAAGAGAAGTAATTCTCTCAGCAATCCTGAAAAAACCCCGGCTTGCCGGGGTTTTTCTTTTTCCGGCTGGTGAATACCATAAAACGCATTCTGAATTTTATAACGTTCTGAAGAATCAATGATTTATATCGCATAATCATCGTAAAAAAATCGGTAGAATTTTAGCTGTTTAAAAAAGTTTTTATAATCAAAGAAATACGATAAGA # Right flank : CTATGACTGATCCTGTAATATTGTAGTAATCCAATATGAGAACGCTGTCTAAACGTCTGATATACACATTATATAATGTGACTATTATTTTAATTCAATGTTATTGATTTAATCATTCCCTGTTTTATTTATTTTTCATGACTATGTTTATCCCCATGTTTATTGATTTTTAGTATTTGTTATTGGCTTTTATCAGGCGCAAACTATGCAAGCTTTTCTAATCAATTAGGAGTTTAATAATGGCTATCCCTCCCTATTTATGGTTAAAAGATGAGGGTGGTGCACTGATTAAAGGGTTGGTTGACGTGCGTGGCCGGGAAAACAGTATTGAAGTGCTAAGCTTTATGCATGGAGTGGACATTCCTACCGATGGGCACACAGGTCAAATAACCGGGCCGCGAATTCATGATGCATTAGAATTTGAAAAAGAAATTGATAGTTCAAGCCCATTGCTTTATAAAGCATCAACCACCGGTCAAACACTAAAAAGTGCTGAGTTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 25181-23951 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZK01000029.1 Chimaeribacter arupi strain 2016-Iso1 NODE_29_length_47549_cov_37.0483_ID_5699, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 25180 28 96.4 32 ...T........................ TGCAAATCGGCCCGGAATTTTCCGTTCAGTTT 25120 28 100.0 32 ............................ TGGAAAACACCGGATGTTATTTACGTCGCAAA 25060 28 100.0 32 ............................ TATCAGCGGCACTCGCAATAACTCAGACACGC 25000 28 96.4 32 ....................T....... AGACAGAACACCTCAGTTATTAGTTCATCAAT 24940 28 100.0 32 ............................ TGGAAAACACCGGATGTTATTTACGTCGCAAA 24880 28 100.0 32 ............................ TATCAGCGGCACTCGCAATAACTCAGACACGC 24820 28 96.4 32 ....................T....... AGACAGAACACCTCAGTTATTAGTTCATCAAT 24760 28 100.0 34 ............................ ACTGGAGCCGGGTATTCACTTCCAGGAAATAGAA 24698 28 96.4 32 ...........C................ CTCCTCTGGTGTATCTGCCTCAAAAACTCGTT 24638 28 96.4 32 ...........C................ AGGCAGGTACGGCACCGTTGTGATGCGGCCCT 24578 28 96.4 32 ...........C................ AAGTTTCGCAATCGCTGCAATGCGCCTGCTCT 24518 28 96.4 32 ...........C................ TGAATCGTCGCGGCCGCCTGCTCGCTGATTTC 24458 28 96.4 32 ...........C................ ATACAGCAGGCGTTTTTGAGCTTGCTAAAAAT 24398 28 96.4 33 ...........C................ TTAAGCCTAACAGGTGGCCCCGGTAACACGCAT 24337 28 96.4 32 ...........C................ GGCCAGTATCGACTCTGGCAGGTGCAATGCCT 24277 28 100.0 32 ............................ TACTGCGCCACTTTACCAACCGGGTGCTGATT 24217 28 100.0 32 ............................ ACTGAAGCGCGGGCAGCGAAACATATTTCCGC 24157 28 100.0 32 ............................ GCACGTGACGCCCCGTCAGCTCTGGAGCGCCG 24097 28 100.0 32 ............................ TTAGCATAACTTAGCAACCTGGCGGCCCCGCT 24037 28 100.0 32 ............................ ATATGGGATAGTGATTTTATAGTGGCTTGTAG 23977 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================== ================== 21 28 98.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCATTGCATACGCTGGAGTCTTTGCACTGGCGTACCGGCCTTAGCGATTACTGCGCTGTTTCAGCGATCACACAGGTCAGCGGGATCAAAGGGTGGCGCACGGTAAGCCGGGTGCAGGTGAAAAGCAGTGCCGGGCGCTTATTGCGGCGCTCAGTGAAGAAAGGCTGGATCAGTGAAGCAGAAGCGGCACAGCGGCTTGAAAATAGTCAGGAACAGCGAAGCGACTTGCCCTGGCTGGCAGTAAAAAGCCTTTCCAGCGGTCACCACTTCCGGCTGTTTATCCGCCACGGTGAACTCCAGCCCGCCGCTACCGCAGGGGAGTTTAGCTGTTATGGCCTGAGTAACACCGCCACCATCCCCTGGTTCTGACCCTTTTATTTCCGCCAAGGATAAGTTGTTGATTTATTGAGACCTAAATATGAGGTAAGAAAAAAGGGGTAAGGAAGAGAATTAAGAGATTTTTTACTTAAAACCAAAAAGTTAGAGAGTTGGCTGGTCA # Right flank : GGCTGGAGACAGTTTGATGAAGAGGCCAGACGCAGAAAAGCAAAAACCCAGCCATTGGCTGGGTTTTCTGAATAAGTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTATTGGCTGAAGGCCGTCAACGGCTTTATGCAGAATTCTCCCTGAAACCGGGCTGACTGCTCTCTTTTCAGGCAAAAAGCAGCAGGGCAGCAGCAAAAACTGCCCCTGACAGGCGATGTTTATCAGGTCAGCGCACCATGTTTACGGCAGCGTGCGACCTGCAAAACATCTTCAGCCAGCCGTAATGCGACTTCCACATCATGGGGCTGCCGTTTTACCAGCAATTTGCTCAGGCACCCTTCCAGAATCAGCTCCATCTGCTCGGCTACCATCGGCGCATCGTCTGCGTCCATGTCCTGCAACAGCGCCAGCGTATAGTCATAAGAGGC # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //