Array 1 974944-973322 **** Predicted by CRISPRDetect 2.4 *** >NC_018001.1 Desulfurococcus amylolyticus DSM 16532, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================ ================== 974943 24 100.0 44 ........................ GTCTCCACAGCAGAAACAACTATGAACGGACTTGGAAGAGTATA 974875 24 100.0 37 ........................ TCGAGAAAAATAACATCATCTGTCTTTAACTCGTACA 974814 24 100.0 42 ........................ GCGGGGAGAGCGCTCATTCTATTCACCTCGCCCTGGCCCGCA 974748 24 100.0 44 ........................ TGTCTCCATTCACAGTGAATAGAACTACTTCAATTCACAGTGAA 974680 24 100.0 40 ........................ AGGTCTCGCATTGCGCTGATCAATAATAGCAATGGAAAGA 974616 24 100.0 40 ........................ CTCTTACGCGAGTTTCTTCACGAAGACGGGGTGCCCTGTA 974552 24 100.0 44 ........................ CGGGATAGTGTCTATGCTTGCCCCGCTCTTCTCATGCTGTGAGC 974484 24 100.0 45 ........................ GTTTTCATTGTTTTCGCTAGGCTCTAGAATCTGTATAAGCTCGTC 974415 24 100.0 48 ........................ CGAAGTGAACTGCAGTAGAGTGCTTCGGCAGATGCTTGTGTTGAGGGA 974343 24 100.0 42 ........................ TGTTATATAGAAGACACGGGCATCTTATAATTAGAAGTAATT 974277 24 100.0 39 ........................ CCCCCCATCCCTCCACGTAAAAGTTTATAAACCCCTGAA 974214 24 100.0 41 ........................ TTTCTGCGCGCGGCAAATGTTAGAATATTAACTAGTATCAC 974149 24 100.0 44 ........................ GATTTCACGCTGCCAGTTGCGATCACCGCTCAGCTCATAGCGAG 974081 24 100.0 44 ........................ GAGAACACGTACGGCTATAATGGCGGAGAATACGTTGAAAAGAA 974013 24 100.0 43 ........................ CCACTCGCTAATGTATCATTCTATATGACTATTAAATTAAATG 973946 24 100.0 44 ........................ GCCTGGGAAATCGTAGAAATCCGGCGGTTTACGAATATCATTTT 973878 24 100.0 43 ........................ AATTTAGCTTGATACACGTCAACACTAGCTGAGACGCCCTCGC 973811 24 100.0 47 ........................ CATCTGCTCGATCAACAGATTCAGCCTCTGCTTCTTAAGCTCTAAAT 973740 24 100.0 41 ........................ GTCACTTTGCCGAGCAGCTCACTGGCCTCGTTTCTCGCAGC 973675 24 100.0 43 ........................ TTTGCTCGGCGGTTTTACATCTCTGACTGCTTGAATTACTATA 973608 24 100.0 45 ........................ AACCCAAACCCAAAACCAAGCACAGAAAAAATATAAGTTAATTGA 973539 24 100.0 40 ........................ GAGCTTCTCGTACGTCTCTTTCTTGACTGAGACCGCCCTC 973475 24 100.0 40 ........................ AACATCTCTTGCGTTGCAGCTCTGTGGAGTATGTTTATAG 973411 24 100.0 42 ........................ AGAATCATCTGCTCGAGCATTGCCTCGTCAAGCTTTTCTTTA 973345 24 91.7 0 .....................GG. | ========== ====== ====== ====== ======================== ================================================ ================== 25 24 99.7 43 GAATACAATAGAAAGAATTGAAAG # Left flank : GCTCCGGGAGGTCCTGCCTACTGCACGAGGCCTTCAAGCCGTCGAAAGCCCTTCTAACACCACCTACGAGGGGCTTACAGGAGACCACAAGGAGCCTGTCCAGCCTAGAAGCCCTCAACTGTATGAGCGCCCTGATCAAGATATCCTCATGGAAGCCCAGGGGAGACAAGAAGACCCTAGACATAGGCAATAACCTAGAGTAAAAATATCCCAACCAGGCTTAAAAATCCCAAGCATACCATGGGAATAAAAGAAAACCGAAACAGAGAGACAGGACGATCACAACTGTCAATCAAGCCATCACAGAGTCCAAGAACCGAAACAACATAAAACAACACAGCAGACACAATCCCAGGATTAAAAAGGGAATCCACCGAGCCAACACACAAGGCACGATCACTGATCAACCCCACATGACAACCATGAACCCACATCAACACAAAACATTTAAAAACCCAAGACACCAAAAATAAACATGAATACATCAAAGATCAAAAATA # Right flank : ATGGGGTTGTGGGGGTTAGCTCTGTTTCTTTTAAATATTTGTTTAAAATGGTTGTGGGTTGTTTCACGTATGGTGGTGTTGTTTATGTGTGTGTTACTGTGGTGTTGGAATATGATTGTTGGTGTGGCTGGGTGTTTGTATGTGTTGTCTTAGTTTAAATATAGGGTGAGGGTGTCTCTGTGTTCTTCGAGGAATATGTTTCTCTTTCCTTGTAGGATTATGAGTGTTTGGTCTCCGGTGATAACTATGTAGTCTATGAGTGTGTAGCCTGGTGTGATTATGGTTATGTAGTGCCCGGTGAATAAGCTTGTGGCTTTTACCAGGTGGTCCCCTAGATCTATCTCCTCTACTGTATTATAGCATTCCCTGAGTTCTTTCACTGCGTCATGGTAGATGAACACTATTTTCTTTCTTGAGTCATAGATTTCCTTGACCTCGGCTCTCTTGAACCCCTTGACGCTTATGATTCGGGGACGTATCTCTATCGAGTAGTTCCAGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATACAATAGAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //