Array 1 68293-64982 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJEZ01000004.1 Bifidobacterium moukalabense strain GG01T contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 68292 33 100.0 34 ................................. ATGCGCAATTTTAGTCAAAATGCATGTTGATGCC 68225 33 100.0 34 ................................. ATTGTCACTGACTATTTGACTGGCGTTGTTAAGG 68158 33 100.0 34 ................................. GTTTATTATTGAGAATGAATGTCCATAAATGTTC 68091 33 100.0 34 ................................. CATCCGAAAACTGCCGGTACGACTGCAAGCACCA 68024 33 100.0 35 ................................. CATGATAGTTTCCTTTTTGTCAGCCGTCCGCCGAC 67956 33 100.0 35 ................................. CTCCTTGACTGGATTGTTGAGGTTCGCGTATTTGG 67888 33 100.0 34 ................................. ATCGACGAATACCACAAGTATCTGAACCAACAGC 67821 33 100.0 33 ................................. CGGATCCACGCCATGGTTGAGCAGGTTGGCCAC 67755 33 100.0 33 ................................. GAAGGCAAGGCCGAGGACGATGGACTCATCACA 67689 33 100.0 33 ................................. ACCGAGGGTATGAACGCTCCATGGGTCACGCAA 67623 33 100.0 33 ................................. CAGCATGACATTCAACAGCGAGTTTCCACAGAC 67557 33 100.0 34 ................................. TGCGAGCCATTGGCTGCTTGCGTCGATGAGGTCG 67490 33 100.0 35 ................................. GATATGATACATACCTTGCGGACGACTCAAACCGG 67422 33 100.0 38 ................................. GCGCGGATCGGTGAAGATATTGAATTCCGCCACGGGAC 67351 33 100.0 34 ................................. GAGCTGGTCCCGAACGGACAGTATGCAGCATCGG 67284 33 100.0 34 ................................. ACTCTATGTGTCACTCTATGGTGGTGTACACCGC 67217 33 100.0 35 ................................. ACGATCCCACCCGGTTCGACCGAACTGGTGATCAG 67149 33 100.0 34 ................................. CACAGGCGAAGTCTACATGCTCACCTCCGTCTCC 67082 33 100.0 34 ................................. GGGAATGGTGTCGGCCCGGACAACGTGATAGCCT 67015 33 100.0 33 ................................. ATGGACTGCCCAGCCTCGCTAGACCATATCATC 66949 33 100.0 33 ................................. GACACCGGCTCGGCCAGCTACACCGGCAACCTG 66883 33 100.0 34 ................................. ATTGATACTACGCTGTATGGCACCACGTCCTAGC 66816 33 100.0 34 ................................. AATATGATACATACCTTGCGGACGACTCAAACCG 66749 33 100.0 34 ................................. ACCCACAATATATGCGGCACGAATGGAATTAAGC 66682 33 100.0 33 ................................. ATGCATTCCTCGACGGATTCGCGCAGTTCCTTG 66616 33 100.0 34 ................................. TTTGAAAGGAATGGCGGTTTACGGAGATCCGAAG 66549 33 100.0 34 ................................. CTGAAATTTCACCATTGATTTTCATGAGCGAATT 66482 33 100.0 33 ................................. AAGCGCATGACAAATACTATTATCGACGGTGAC 66416 33 100.0 34 ................................. GTCCATGCACAGTCTTTTTACATTGTCAAAAGTC 66349 33 100.0 34 ................................. GCCGGATAAGCAGAATTCCGGCGACAAGATCGAC 66282 33 100.0 33 ................................. ACGAACCAGCGGGGCAATCCGATACGCGAAACC 66216 33 100.0 34 ................................. AAGGTAAAAAGTATCCCAAAAACGCAATAAAATC 66149 33 100.0 33 ................................. GTTGATACAACGCTGTATGGCGCCACGTCCTAG 66083 33 100.0 34 ................................. ATAAATTTGCGTATGTGATTATCGTATTTATTGG 66016 33 100.0 34 ................................. CAATTCAGGCGGAATAGCCAAGCCAAGCTGTCGC 65949 33 100.0 35 ................................. TTGACCGTGACCGTGTAGACATAGGATTGATTCGC 65881 33 100.0 33 ................................. ATGCGCGTGGTCTGATCTGGGACCATTCCCGGC 65815 33 100.0 33 ................................. CGACACCAACCGACGCCGGCTGGTACCTGCCTG 65749 33 100.0 36 ................................. ACATGGCACGAGACGTGCAGGTGTTCATCCGCAACG 65680 33 100.0 34 ................................. TCCTCCCGGCCGGCCCTGCCGGGGCCCGCGATGG 65613 33 100.0 34 ................................. ATCGAACCATCCGACTGGTCCGACCAGGGAGACA 65546 33 100.0 34 ................................. AAGGGCACGTGTACACGGCCCCGCAGATGATCGC 65479 33 100.0 33 ................................. TACAGCGACGGATCCAACCTCAAAGGCTACCTG 65413 33 100.0 34 ................................. CTCTTGAATGATCTGCTACCGCTCGGCCCTGACG 65346 33 100.0 33 ................................. GTAGGCGTGTTTGTGTGGTTTGCAGTAGCGTTG 65280 33 100.0 34 ................................. TAATGAGCAATCCCCCGAAACAGAAGGGCACGAA 65213 33 100.0 33 ................................. GTATCGGACTGCGGAACGCCGAAAACTTCCTGA 65147 33 100.0 33 ................................. GAATGCCAACGCGACGAACTCACCACGAGTGAC 65081 33 100.0 34 ................................. CAACACGTATGCGACCAAAACCGATGTCAGCAAG 65014 33 81.8 0 ..................T.T.GA...CT.... | ========== ====== ====== ====== ================================= ====================================== ================== 50 33 99.6 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : CTGCGGGAAAGAGACGATTGCGTAACGTTGCGAAGACTTGTATGAAGTACGGGCAGCGAGTGCAGAATAGTGTGTTCGAGTGCTCGGTCACTCCAGCAGATTATCTAACTCTAATAAATGAAGTGATGAAAATCATGGATCAAGAGAAGGATAGCCTACGCTTATATAAATTAGGAACGAAATATTCTGAGAAGATTGAATATTATGGTGTGCAACGGCATCTTCCTGTGGACGATGTAATGATGATCTAGGCACCGAAGTCCGCCGTTGTGCGAAGTGGAAGCTCTCATCGGATAAGGCGAGCTTCGCACTTGGATAGAACTTGGAATCGAAAAGTAAGTCGACTTTCCTTTGCTGTTTGATAATTTCAGAGAGAAGAATCGTTATTATTTTTTGGTCGAGTGATTAGAATAACAGGTTTTGACCTCAAACCCTGCTACTCTTGGACTCGTACGAAGGATAGATGTTCCACAATGTGAAACATGCTGTCCATCTGTGCA # Right flank : GACGGGGGCGGTCATGGGATTGCGTGAGCAGCGTGAACGATGCGGGTTGACGTTGTTCCAGTTGGATGCGTTGACCGGTATCGCCTATACGCGGCTGAGTACGTTGGAGTGTAATCCGTCTGAGGCGCGGAACATGTATTTGTGTACGGCTCGGCGGATTGCCGACGTGTTGCATTGCAACGTGTTGGACTTGTATCCGGATGAGGATGCTTGGCGTGGTGGCGTGTCGGCTGGCGTGACCGGGTTGAGGAGGATTCGTAGGGAACGGCATTTGACGCAACGGATGCTGTCGTCTTTGACGGGTATTCCTCAGCCTAATATTTCTTGGTTTGAGACTGGGTATCGTCCCGTGTCTCAGATGTATTTGGATACTGCGCGTCGCCTGTCGGAGGCGTTGCAGTGTGACCCTGTTGATTTTCTAATTGATTGAAAGGATTTTGTGATGAAGGCTGAGGTTGTTATTGTTTCGCGGTTGGCGCGTCATGGCGGGACGATGCTGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //