Array 1 965990-966348 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 965990 30 100.0 35 .............................. AGTAAAAGTATTATTAGTATGAAAGGGGTTGAGGA 966055 30 100.0 35 .............................. AATCAGCATCCTGCTCTATAGCTCCTGAATCTCTA 966120 30 100.0 34 .............................. GTATTATCCATGTCAAAAATAATTTCATTATATT 966184 30 100.0 36 .............................. TGCAATAGGGAAACAATTGGACATATTAGGTACTAT 966250 30 100.0 37 .............................. AATATAACTTTAATAGTATGATAATCTGGAACTATTT 966317 30 90.0 0 ........A......T.............A | TA [966341] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 98.3 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : AATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTGTAATTGTAAGGAGGTGAGAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1804319-1803102 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1804318 29 100.0 37 ............................. TATTGATAATAGTTTAGTAAGAGCAAAGAGAATAGAA 1804252 29 100.0 39 ............................. TATAAAAATATATGGAGGGATTTAATAAATGACAGTAAA 1804184 29 100.0 37 ............................. AAATTTAATAAAGCCAGACATAAATTGTCTGACATAA 1804118 29 100.0 37 ............................. TTTAAATACTCCTCTTTAATAATCTTATTAATATTTA 1804052 29 100.0 36 ............................. TTTAGATTGTCATTATTTTCGTTGTTATTATCCTCA 1803987 29 100.0 37 ............................. AACTCTTTTTGTTGTCTGATTTCTAAGGCATAAGTTA 1803921 29 100.0 37 ............................. TTTGGATTATTACCGTAGGACATATCGCCAAAACTTA 1803855 29 100.0 35 ............................. CCAAACATGGCGATTATATTATCTGGGAAGTACCA 1803791 29 100.0 38 ............................. AGAAAATATGAAGCAAATAAACAAGGAAATAACTTTAA 1803724 29 100.0 36 ............................. GCTAAATGTTATCAGCATGGTGCTTGTAGGCTAAGA 1803659 29 100.0 39 ............................. TTAAGTAACCTATCCAATAATACTCCTAAAATTAATACA 1803591 29 96.6 35 ..C.......................... ATCCATTCTTTGTTAAGCTTGCCATTCCTGCTAAG 1803527 29 89.7 39 .....T.A......A.............. CTTTTATTTAGGATCCTCCCTACTTCTTTAGGTGTAAAG 1803459 29 93.1 37 .......G......A.............. GATACTACGCAGGTAGTAAGTAAAGATGGCTTTGGAG 1803393 29 93.1 37 .......A......A.............. TTTTAAGTTATGGTTATATTCTCAAATGGCTGGTCCG 1803327 29 93.1 36 .......A......A.............. TCTATTATTGCAGAAGTTGAAGAAGCATTATAAAGA 1803262 29 96.6 38 ..............A.............. AACGGGTGTCTTTTTTTATATGCATTTTTAGGTTTGCA 1803195 29 100.0 36 ............................. AGTGCTGTTATTATTTCACTTATTTTTGCTGTATTA 1803130 29 93.1 0 ...........................GC | ========== ====== ====== ====== ============================= ======================================= ================== 19 29 97.6 37 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : TAGAATTCATAGGAACATTCAAGTTGAATAGTAACATGAGATGTATTTAAATTTGCAGATGTATAGTTAAATATCAAATGTCGGAGAGTTGAATAGTAACATGAGATGTATTTAAATCTTTGTATAACATTTATCTTCTTCTCTTTCTTTTGTTGAATAGTAACATGAGATGTATTTAAATTATAGTTCATAAATATTATTTGTATCATATGTATCATTGAACATTAACATGAGATGTATTTAAGCAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGATTTTTGTTATGTTTTTATAAAAAATAAGAATCAGCTGGAAAAATTTCTTTAGAACCTTGTAAAATCAATGGTTGTGTGATATTCTTAAAAATAAGGAATAGCTATTTTACTATGA # Right flank : AGAGAACCCAAATCTACGATTTGGTGTGAATCGCTTACTACTTAGAGAGTGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTCTCAGCATAAAACATTGCTGGGAATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAGTATTAAAAACCTGTCTATTTTTAGGGCAGGTTTTTAATATTTAAAGGAGATAGATAAAATAGTTTTTTGTAGTCATGTAAATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 3 1804928-1804573 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1804927 30 100.0 36 .............................. ATGTGTACTTTATGCAGATGGCATATAAAAATAATT 1804861 30 100.0 35 .............................. TTAATTGCTTTAATAGAATTCATAGGAACATTCAA 1804796 30 100.0 35 .............................. TTGCAGATGTATAGTTAAATATCAAATGTCGGAGA 1804731 30 100.0 34 .............................. CTTTGTATAACATTTATCTTCTTCTCTTTCTTTT 1804667 30 100.0 35 .............................. TATAGTTCATAAATATTATTTGTATCATATGTATC 1804602 30 83.3 0 A.....C.T...................GC | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 97.2 35 GTTGAATAGTAACATGAGATGTATTTAAAT # Left flank : TAAAGGAGAAGATGTAGATGGGAAAAGGATTTAATTATAATTATGCTTTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAACAGAGTATTTAAAGTTTGCAAAAAATATTTATCTCATTTCCAAAAATCTGTATTTAGAGGAGAAATAACACCAGCAAACTTAATATTATTAAAAAGGGACTTAAATAAAGAAATAGATGAATGTGAAGATTTTATATGTATTATAAAGCTAATGAATAATAATGTATACGGAGAAGAAATATTAGGGAATAAAGCAATGACAACAGGAGAAGATTTAATATTATAAAAAAATGGAATCAATTTTTCCAACCAATTTTAATTTTAAAACCTATCTTAGGCATTAAAATATAAGGCTTAAGATAGGTTTTTATTATGACTTTATGAAAAGTGGGAATTGCCTGGAAAATTTTCTGTAAAAGCTTGTAAAATCAATACTTCTATGGTATTCTTGGTTTTAAGGAATGGCTATTTCCCTATG # Right flank : AGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGATTTTTGTTATGTTTTTATAAAAAATAAGAATCAGCTGGAAAAATTTCTTTAGAACCTTGTAAAATCAATGGTTGTGTGATATTCTTAAAAATAAGGAATAGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTATTGATAATAGTTTAGTAAGAGCAAAGAGAATAGAATTGAACATTAACATGAGATGTATTTAAATTATAAAAATATATGGAGGGATTTAATAAATGACAGTAAATTGAACATTAACATGAGATGTATTTAAATAAATTTAATAAAGCCAGACATAAATTGTCTGACATAATTGAACATTAACATGAGATGTATTTAAATTTTAAATACTCCTCTTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 1815333-1814859 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1815332 30 100.0 37 .............................. GAAGATGAGTACATGGCCATTAGGAAAGAAGCAGAGA 1815265 30 100.0 35 .............................. TCAAGTATGTGCCAATATATGGTAATATATAAATA 1815200 30 100.0 34 .............................. AATTGTTCAGGATTTAAAAAATATTTACTATCTG 1815136 30 100.0 35 .............................. AAGATAAATACTAATGAAAACATAGTTGGATATAC 1815071 30 100.0 35 .............................. CCTGAAACCACTTTAATATATGCGGACTTGAATCA 1815006 30 100.0 37 .............................. TACAAAAATATTTGACATTCACTGGGAAAGGTGATAT 1814939 30 83.3 21 ...A..T.T......G.............G ATTATTACGTTTATTATTAAA Deletion [1814889] 1814888 30 73.3 0 T......CT..............AA..CTG | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 94.6 34 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATAGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATGAAAATAACAAATAATTATATAGAATACGCTAATATTTTTTCAACCAACTTTAGCTTACAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGCTTTTCTTACATATTTATAAAATATTATAATCGGTTGGAAAACTTTCTTTAAAATCTTGTAAAACCAATGGGTGTATGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : TTTTAAAAGTGACGACTTTTTAGTAATATTTGTACAAATAACAGAGTAGTATATTAATTTAGTTTTAGAAGAATTATTGTTATAACTAAAAAAGATAGTTTAAATTTCACAAAATTTAAACTATCTTTTTACATTCTAAAATAAAAGCTAAAATTTAAATTAAAATTGTATTAGTAAGTTAGTTGAATATCTGAGCATTTTGGAAATATTAAACATGATAAATATTTACATTAAATTATTTATATGGTAGTATGTATTTATAGATATAAATCAATTATAACGTTAATTAAAAGGGGAATAAATTTGGGAGAAATAATTCTTAAATTCATTGAAAATAATAAACTTATGCTACTTAAAGTAATGTTATTAATTTTTTCTATTTTTAATAGAAAAAAAGATATAACTTTAGTAAAAGAAGATAAAAAAGGATCTTTTCGTTTAGTTATATCTAATAATGAAAACATATAAAAGAACCTACTTTTATATGTTTCGAAAATAAT # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 5 1817449-1816244 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1817448 30 100.0 34 .............................. AATAGATGAATTAGGATTACCAGCGCATTCTATT 1817384 30 100.0 36 .............................. ATGTTGGTAAAAAATGGGCTGAAGGAACAGGAAAGG 1817318 30 100.0 34 .............................. TAAAGATGAAAGCACATGGCATATACACGCTCTA 1817254 30 100.0 35 .............................. GTACTATGAACCCTTGTTGTAGTGTTACTAGAAAA 1817189 30 100.0 35 .............................. TTAGGAACAAATGGATGTGGACTTAAAGCTACTAA 1817124 30 100.0 36 .............................. GAATTTGAAGTTAAAAAAGATGAAGAAATAAAAGAA 1817058 30 100.0 34 .............................. GGCTCTTTATCCTCGAATATTATAGCCCTTTCTA 1816994 30 100.0 35 .............................. CCATCTAAATCAGCTATTCTAAAAGGTTTTATTCC 1816929 30 100.0 37 .............................. ATTTGATAATTAATTTGCTGTTTATACGAAGATACAT 1816862 30 100.0 35 .............................. CTTCTTGTGGTTTGCTTTTGTCAAGCTGTGGTCTA 1816797 30 100.0 34 .............................. AAGATAGATATATCAACGGTTTACAGAGATAGAG 1816733 30 100.0 37 .............................. GATATTCAAAGTGGAAGAATTAAGCCTATTGGCGGGG 1816666 30 100.0 36 .............................. TGATAATTTTCTGCAAGGAATTTTAGTATCATTTGA 1816600 30 100.0 39 .............................. TAGATAAAATCAATTCGTTTATTAGCAAAATAAATATGC 1816531 30 100.0 36 .............................. GGGATCTTTAATGAATATAAGTCTTAGCAATAAGGC 1816465 30 100.0 35 .............................. ATTAATTTTGTAAAAAAGTAGCTATGCCAACATAT 1816400 30 100.0 34 .............................. TCAACACTATTTTTTCTTTCTATAGCTATGTCAT 1816336 30 100.0 33 .............................. TAGATTATGATCCAGCACCAATACTTTTATTAG 1816273 30 90.0 0 .......................C.G...A | ========== ====== ====== ====== ============================== ======================================= ================== 19 30 99.5 35 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAAGCCTACATTCATGTATTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCATGGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGCTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTTAGATTTGGTGTGAGCCGCTTACTCCTTGGAGAGTAGGATAAAGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGAATAGGTTTGTTTTATGTATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAACAAATAACGATGAAAAGATAACAAATAATAATTAAGGTGGTTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAACTAACAGCAAATATTATACAGAAAACTATAGAGAATCAATTATAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTTATAGAATTTTATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAACATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTAAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATAGTTAATTCTAGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 1828324-1827632 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1828323 30 100.0 36 .............................. CTAAATTGTATATATGTTGCATTATTTTCCATGATT 1828257 30 100.0 36 .............................. CAGTTAAAACCAGAGGCATTGAAAAGATTTGATACA 1828191 30 100.0 37 .............................. TTATCTATATTATGGGGAGTAGCCTTACAAGCTATGC 1828124 30 100.0 36 .............................. TAGTTTCCATGATATTTAGTAGATGCCGGAGCCACG 1828058 30 100.0 37 .............................. ATATTCATGCGTCACCTCTCTAAGTAATTTAGGGTAA 1827991 30 100.0 36 .............................. TTCAATATTATGGTGGGTATTATTGCGACTTAGGAA 1827925 30 100.0 35 .............................. TACTCCAATTTTGAATAGGAAAGAAATTAGTACAA 1827860 30 100.0 37 .............................. AAATTATATTCCCCTTTCTAATACCTCTAATATTTTA 1827793 30 100.0 35 .............................. AAAGATTCTACAATTTATAAAAAAGCAAAAATGAA 1827728 30 100.0 36 .............................. TTGCACGTCCCATAAGGGTACTGATATCAAACTGTT 1827662 29 80.0 0 ........C........T..A.-.AA.... | AA [1827653] ========== ====== ====== ====== ============================== ===================================== ================== 11 30 98.2 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : GGACCTGGGATAATCAAGGAAACGTTGAGGATGTTGCAACAGGAAGTGCAGCTGGACCATTAGGTGCATATTTATATAAGCATAATATTTTTAATGTAGGTCATGAGATTATAATAAATCAAGGAAGATTTGTCGGCAGACCTAGTAAAATTAAGGTTTCTATGAGCATTTCTGAAAAAGAAATATTAGTGTCTGGAGAGGTAGCTATTTTGGCAAAGGGAACTATTTTACTATAATAATAAACGTAAAAAATCGCATTATTCAAGAAATTGAATTTGCGATTTTTTATTGCGCAATCCAAATATATTGTAAAGTTAACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTAGAGCGTTGACACATAAGGCTTATGGTAAGTTTTTATTTTATATTTGTAAAAAGCAAAACTACTTGGAAAAATTTCTTTAAAATCTTGTAAAATCAATGGTTGTATGATATCCTTGAAATTAAAGAATGGCTATTTTACTATG # Right flank : TAATATGATATATAATAAGAATCATTAAAAGTCTTAGAAGAATCTAAGGCTTTTATTTTATGCAAAGTTTTAGAATAGAATATAATTAGTTAATTAAGTTTCTATTAACAAAAACAATAATACTTTTAAAATATAAATAGAATAATTGGTTATATTGATTAAAGGGTATATGTTATAATATAGATAAATTTGTATAAAGAGGTGTATAAATGGAATTTTGGGAACTGATTGTAACAGTAGATGATAGATCTTGGCTGCAAAATAATGGGGATTTAGATTTATCTACGGGTAGATTAGAAGATAATTTAGAAAAGAAATATAAAAACTTTTTTAATGAAGATATAGATGTAAAGGATAAATTTATAGAGAGCATAGAGTTTAAGAATAGAAAACCAATGCATTACAACTATAAAGGTATAAAATTATTAGCAAATAAGGTAAGTATACAAGTGAAGGATAATGAAGAAGCACAGAAGGTGGCTTTCTTAGCAAGAGCAGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 7 1836020-1835194 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYV01000008.1 Clostridium botulinum B2 331 B2_331_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1836019 30 100.0 36 .............................. AAACTTAAAAAGACAGTTAAATGAGCTGAAGAATTA 1835953 30 100.0 36 .............................. ATCAATTTATAATAGAAAAAGATATAGATGTTTTAT 1835887 30 100.0 37 .............................. GGGAAAGCGAGAAATGGTAAAGACTCTACATATGAAA 1835820 30 100.0 38 .............................. TTGCATTTTGGTATGGAAACATATTCGCATTTAGAATA 1835752 30 100.0 37 .............................. TTAAATCTATCATTTTGAAACTTATTTTTAGGCTCCC 1835685 30 100.0 37 .............................. CCATCCTCGTCATCAAAACTATCTACAGATATAGCAA 1835618 30 100.0 36 .............................. AAAAATTGCTACTAGAGTTTATAAAGCCATAGATGA 1835552 30 100.0 36 .............................. TTGCAATTACTGCAGTTATAATTACATAGTCCGTTT 1835486 30 100.0 35 .............................. TTTTCAATAATTTTGATTATTTTTTCAGCCTCATC 1835421 30 100.0 36 .............................. AAGAGGGAAACAAACATATTTATATATCGAGAGTTG 1835355 30 100.0 36 .............................. AATGATATATAATGGCAAAAGAATACGAGGTATTCC 1835289 30 100.0 36 .............................. TGTTCATATGTACCTTTAGAATATTCGACCCAATCT 1835223 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 100.0 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CATAGGCTGATCCAATAGTTAAAAAAAGTTCTGCAGTTATATCAGAATGAGTAAGGGTATAGCGTCTTCCTAAAATAGGCTCCGTTGAGGTTACACCATTTCTAAATTCAACTGAAAGTTTATCAGTATTCAATTTGTTCATTTAATCCCTCCCCATACAATACGTTTTATACAATATTATATGATAGGATTTATGAATTTAGTATATTTATATATAAATCAATTTTAATTATAATATTTAACTTAAATCTTGTATCAGATCTTGTACTACCAATAATATATCAGCTAATAGTACAAATAAAATATTTTCATATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGGTTCTTATTTTGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTACGAAGCCTTGTAAGATCAATGGGTTTATGTTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTGTACATAATCTGAAATTAAAGCGAAGTAACCCTTGAAAATAAAAGTACTAACAATGTTCTTTGAAGACTGAATAATACGGTGTTAGGAAGTAAAAATTTTTTATAACAAAATATATCTTTACAAATGTAGTAAGGTGGCTTACTATATAAATGAGGAGGTTTCATTATGGAAAGTTTTAAATTTAGTCTTAGGGATATACCAAAACGAGAGATTTTAAATGAATATTCTAGCCGATTTCCGGGTATAAATGTAGATGCAGTCGAAAGCTGTATAGCACTCCTCAGGACGGCTTCTGATATTTCAAAAATACTTGATGAACACTTTTCTAAGTATGGCATTTCGGAAGGAAAATTTACAATTTTGATGCTGTTATATCGACAGAGTGATTATCAATTATCTCCAATATCTCTTAGCAAAAAAGCTGAAGTTACTAAGGGAACTATGACAGGATTAATAGCTGGCCTTGAAAACCAAGGTTTCATAGAGAAAATCTCCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //