Array 1 553753-552402 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXDE01000007.1 Ornithobacterium rhinotracheale H06-030791 Cont7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 553752 47 100.0 30 ............................................... CCTTGCTACCACGATATAATTAAATATCGT 553675 47 100.0 29 ............................................... CTATGCTCTATGTAAAAATCTTTACGCTC 553599 47 100.0 30 ............................................... TTGTTCTTTTAATTTAGCTTGTGCTTTCTC 553522 47 100.0 29 ............................................... GTATGAGGTTATTAATTAATCGAGAAGAT 553446 47 100.0 30 ............................................... AACTCTCTCTTGCAGTAATATCCCCCTATA 553369 47 100.0 30 ............................................... CAGTCTTCCATCACTTTGCTCTTTTAGATT 553292 47 100.0 30 ............................................... TAAATAGTCTAAACGAATCTTTTCAAGTTT 553215 47 100.0 30 ............................................... TAGGACCAGATTTAAACACTTCATCTGTTT 553138 47 100.0 30 ............................................... CCTGCGCTGTGGCTAAATCTTTTGCGTGTT 553061 47 100.0 29 ............................................... TGTTGTAAGTCCACTCGCAGGGAATGCCA 552985 47 100.0 30 ............................................... ACATAAACATCCGTCACATTCTGACCATTT 552908 47 100.0 29 ............................................... GGTGTTGGTTATCACCAATTAAGAAATTG 552832 47 100.0 29 ............................................... TATGTGCGTTAACTTAGCTTCTGAAATTT 552756 47 100.0 30 ............................................... GAAATTCCTCGTCAGCTTCAAATTCTATAA 552679 47 100.0 30 ............................................... CCATTTTTAATCTATTTTAATTTACATAAA 552602 47 100.0 30 ............................................... TAACCTAAGTTTAATCCTGTGATCCCTTCG 552525 47 100.0 30 ............................................... TAGATATTGTTTAGCCGTTAAGCGGTTCAT 552448 47 87.2 0 .........................T..T....G.C.T...T..... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.3 30 CTTGTGATTACTCACACAAAAATAAGAACTTGAAAGCAAATCACAAC # Left flank : AGAAGGCTCTAGAAGAAAAATCGCTTATCCTGAATTTTGCTAAACCTATGGAAGAACTTTTCACTCGCTTAAACCAATATCGCTCTATGTGGATTCTTGTATCATTTGACCTGCCTACGGAAACCAAGCTCGACCGTAAAAGAGCTAGCAAATTTAGAAAACAATTGCTAGAAGATGGATTCTCTATGTTTCAATTTTCAATTTATATGCGATTCTGTTCAAGCCGAGAAAACACAGAAGTGCACATAAAGCGAGTAAAAGACATTTTACCCAAACATGGGCGTGTAGCCATTTTTAGAATCACCGACAAACAGTTCGGTATGACAGAAATATTCCATAGTACCAAAGAGGTGGAAAAACCACCCATGTACCAGCAATTGGAACTTTTCTAGAATTAAAAAAATTATCAAAAATTTACTTCAAATAAAAAAAGGTTGCAGATTTCTATAATCCTAGCAACCTTTTCAACTTTTTGATTTACAAGCAAAAACAAGAAGTAT # Right flank : ACCCTACCCCATCTCCTTGCCTTGCATCGACTTGTGATTACTCACACAAAAAAACCCGTAGTGCATTATAAAAAAGGTTGCCCATGAGCCTAAAGAAAAGTAAATTGCATTGGTTACCAATCAAATACAATTATGAGCAATCTAGAGGCAAGTTACAATTTTATTTTGAATAAACTAATAGAATTTTCAGGAACTGAAAATTTCTATTTTAAACCAGTGAAACCAAAATTATCTGATATAGAGCTGATAAGCTTAATTATTTTAGCAGAATTTAAATCTATCGATTCTGAGTACCAGCTTTTTAGAGAGATAAAAGGTTGGGCTATTGAATCTAAAATTGAAAGGAGTGTTTACAACAGAAGAAAACGAAAACTCTTCCCTTTTCTTGAAGAAATTAGGTGCAAAATGGTGAAAAAGTTCAATGATTTTGAAAACTATTTCTTGGTGGACAGCATGCCTTTAGAAGTGTGTAAATTATCCCGCTCTTCCAGAAGCAAAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTGATTACTCACACAAAAATAAGAACTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //