Array 1 167867-169756 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQWL01000004.1 Moraxella catarrhalis strain 4737718Q NODE_4_length_230575_cov_234.182106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 167867 28 100.0 32 ............................ ATTGGCAAGCGTTTCGCTAATGCGATAAGTTG 167927 28 100.0 32 ............................ TATCTCATAAATAAATGGCTCACTTGGCGGAA 167987 28 100.0 32 ............................ AGTCAAACTCGCCACGCCAAACGCCGTCATCA 168047 28 100.0 32 ............................ GAACATTCAGGGCGGTAGTATCAACATTGGCA 168107 28 100.0 33 ............................ ATCAAAGCGTGTTGTCAATCGCTCAAGCCGCTC 168168 28 100.0 32 ............................ ATTTTTTAGCGTTTCGCTAATGCGATAAGTTG 168228 28 100.0 32 ............................ GCTCGCTTAACGCCTGCTCTTTTGTTGTTAGC 168288 28 100.0 32 ............................ ATGGCAATGATTATCAATGGGCAGGCAGAACC 168348 28 100.0 32 ............................ GTTCAGATAACGCACGCTCTTTGGTTGTTAGC 168408 28 100.0 32 ............................ GCCAAGGCATGCAGGGGGCAGACCACCTCCTT 168468 28 100.0 32 ............................ AAAAACTGCAAGCACTTGGAACATTGACTTTC 168528 28 100.0 32 ............................ GTACAAACCACCCTAAACGGACAGACAGCGAA 168588 28 100.0 32 ............................ TGTCGTGATTTTCTGCAAAGTTATGCCGTAGA 168648 28 100.0 32 ............................ TTGATTGTGATTGGCGTACTTTAAATGCTGAT 168708 28 100.0 32 ............................ TTAAAAGGGTATTTTGGCATGACAAAGTTTTT 168768 28 100.0 32 ............................ AAATCAACCGCCTAAGCTTGTTATTATTGATG 168828 28 100.0 32 ............................ TGTTTGCCAGTGGCGAAAATCACTTTTTTGGA 168888 28 100.0 32 ............................ AATGTGGTGGAATTTGTATGGTAAAGGGTCTA 168948 28 100.0 32 ............................ TGCTGAGTTTGAGTTATACGCCATGAAACCAG 169008 28 100.0 32 ............................ TAACATCAACATTGGGCAAGTAGTCTACTTGT 169068 28 100.0 32 ............................ GTCTTGACAACGCTTGCTCTTTCGTTGTTAAG 169128 28 100.0 32 ............................ ACCCAGCTCTGATTTTGCTGTCTTAATCTGCT 169188 28 100.0 32 ............................ ACTCTTACAACGCATAAGGACACTCATAATTT 169248 28 100.0 32 ............................ AAAATCTTTCTCAATTTTCTCAATATCTAATA 169308 28 100.0 32 ............................ TAATTTGCCCATAAACCAGTACTTGGTGTATT 169368 28 100.0 32 ............................ TCTATGCTGTGTAGGCTTGTGCGTTTTGCACT 169428 28 100.0 32 ............................ AAATCGAAATTAGGATTAAGTTGCTCTATAAT 169488 28 100.0 33 ............................ GCTAAGCTTAACCAAGGGAACCAGTTGGTTTCT 169549 28 100.0 32 ............................ GTTTGGGTTAAGGTAGTGATTGCTTCTGTGCG 169609 28 96.4 32 ......A..................... GTTATAATAACACCCATAACATAAGTTATAAA 169669 28 92.9 32 A............T.............. TGCTATGTTTGATTACTATAAAAGTACTAGTC 169729 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.6 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TCGCATTGCGGCTTGGGTGATGGATGTCCCTGTGCCAAGCAAGATGACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTCGTATTTGGTTTCGGTGAGATACAGGATGCGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATACATTGGCGCGCTTGGAGTGCAAAATTGCCTTAAGATCCGTGGGTTTGAGCGTATCCATGACGTCAATTTCCTTAATGATGAATTTAATTTAATCACACCCATTATAGCCTGTCAAGCGATGATGCGACCAAATTATAAGCTTATATTATCCATCTGCCATATCAGTTATGCTATACTAAATTTGCCATCAGATGATGATGGGTGTAAAAAACCTTTATTTTTTCAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTAGTCAACTTTTGATTGGATAAAAAGGGTCAATCCATCATAAATGGCTGTTATTTCTTAATTTTTTCGGTTATAATTACT # Right flank : ATTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCATCGAACAAACCACCATGGAAGAGATTACGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGCGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGAAGCATCACTTGAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //