Array 1 89500-90610 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP009302.1 Berryella intestinalis strain 68-1-3 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
     89500	    33	 100.0	    35	.................................	TTTTTACATAAGTAGTACACGAAATCCGCATAATC 	
     89568	    33	 100.0	    33	.................................	GGCCTCAACCCCCAGTATAGAAAATAAGGGTTG   	
     89634	    33	 100.0	    33	.................................	TTATCGACCTTGGCGGAAAGGTTGGAGAGCGTG   	
     89700	    33	 100.0	    34	.................................	TGGCGCTGCGCTTCCTCGTTTGCTGCGTTCGCGG  	
     89767	    33	 100.0	    34	.................................	TAGAGCAGAGGGCCTTTTTGGCGTCGCTGGAGCC  	
     89834	    33	 100.0	    33	.................................	TCCCTTCGATCGAGCCAGTTGTTGAACACTTGG   	
     89900	    33	 100.0	    34	.................................	CGCTCGCCCCTCCGCGAAGCGTCGGCGACTCGTC  	
     89967	    33	 100.0	    35	.................................	GAAACCGATTTCACGCGTCCAAAAATGCTCTAAAA 	
     90035	    33	 100.0	    34	.................................	CCGCCGCCGCGAACCCGTCACGCGGCTCCATTAG  	
     90102	    33	 100.0	    35	.................................	ACCTCCTCTACCTCGTTGTTTACTCAATTGAGTAA 	
     90170	    33	 100.0	    35	.................................	GCGCGTCGGCCTCCCTCCGCTGGGAGGAGCTGTCC 	
     90238	    33	 100.0	    35	.................................	GTGCCCGACTTCGTCGTCATGAACACGCTCTTGCC 	
     90306	    33	 100.0	    35	.................................	CCGCAGTCGGTGCATCGTCCCTTGGTGCGCTCGAT 	
     90374	    33	 100.0	    34	.................................	GGAGCGTGGTGCGAGTCCGAGGGCCTGCAGATCA  	
     90441	    33	 100.0	    35	.................................	CTGACGGCGCTCATCGTCTACCAGGCGATCGACCT 	
     90509	    33	 100.0	    36	.................................	ATCTGGCCTTCGTATGAGCCTTACCTATCGCGCTAC	
     90578	    31	  87.9	     0	.........T..........-.-.A........	|                                   	CC [90606]
==========	======	======	======	=================================	====================================	==================
        17	    33	  99.3	    34	GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAAT	                                    	       

# Left flank :   AGTATCCTCCGGTATTTTGGAAGTAAGGAGGACGGCTATGATGCTTCTCGTTACGTACGACGTTGACACCGCCGATTTAGCGGGCGAGAGACGTCTTCGAAAGGTCGCCAGGGTATGTGTGAGTTACGGGCAGCGAGTTCAAAACTCGGTTTTCGAGTGCGTTGGCGACGCTTCAGTAATTGAGAAGATGAAGTCCGAGCTTCTTTCAGTTATCGATACGGATAAGGATAGCTTACGGTTCTATAATTTAGGAAACGGCTACCATTCCAAGATCGAACATCACGGGGCCAAACCGTCTTACGATGCCGAAGGGTTCTTAGCGCTATAGCTCTCAAATTCGGTGGGATGCCGGTGCGAACAGGGGGCTGTCAGGGTTTTCCTGGGAGGTTCGCACCGGTCTTTACGCTTAATGTTGCCGAAAAAAAATCTCGATGAGCGTTTTTCTTCCTAGGTAGGTCAAGATATAGGGTCGACTAGGCTCTTTGCTACAATTTGTAGCG
# Right flank :  TGAATGCTGGTTGAGAGTTGCATGATTCTGGAGATGTGTTCCGCATTAAAAATATTACGGAGCGCAATAAACCTTTTGTCTAATTATTGTGTGACGCTATAATTATATCGGCAGGAGAGGAGGAGGGGGATGCCGCTAACAGCGAGGGAGGCTGCGAGGCTAATCAGAAGGAACGGCGGCAGGTTTGTAAGGCACGGCGGTAGGCATGATATCTACGAGACCGCAGATGGGACGGAGATACAGGTGCCGCGCCACGCGAAAGACCTAAGCCCAGGGGTGGAGCGGGACATAAAGGAAAAGCTGGGACTGAGATAAGTTCCGGCACCACCCTCTTTCGAACGATAGGAGAGATCGATGAAGTACATATACGAGGCGATCATAGAGCCCAGTGGGAATTGGCTCGAGGTCCGTTTCCCCGACTTCGGTATTATCACGCAGGGCGAGGATATGCAGGACGCAGCGTACATGGCGCAAGACCTCCTTGAGAACCACATCGTCAT

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-8.30,-8.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//