Array 1 79012-78191 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FXOC01000011.1 Klebsiella pneumoniae subsp. pneumoniae strain 3189STDY5864948, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     79011	    29	  93.1	    32	............TG...............	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
     78950	    29	  93.1	    32	............TG...............	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
     78889	    29	  93.1	    32	............TG...............	TGGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
     78828	    29	 100.0	    32	.............................	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
     78767	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     78706	    29	  96.6	    32	............................C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
     78645	    29	  93.1	    32	............TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     78584	    29	  96.6	    32	.........................A...	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     78523	    29	  93.1	    32	............TG...............	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
     78462	    29	 100.0	    32	.............................	TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA	
     78401	    29	 100.0	    32	.............................	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
     78340	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     78279	    29	 100.0	    32	.............................	CACTACCAGATCCGAATGGACACCCGTAATGA	
     78218	    28	  93.1	     0	.......................-....A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  95.8	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC

# Questionable array : NO	 Score: 5.61
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGTGTGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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