Array 1 1170-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZRE01000012.1 Acinetobacter brisouii strain SM1 contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1169 28 100.0 32 ............................ ATTCACAGCCAATTGATTCTCATACCAAGATT 1109 28 100.0 32 ............................ AATCTCAACTTTTAATACTCGTGAATTACGAA 1049 28 100.0 32 ............................ GCAACGAGTTATGCAAGACTTGTTGTTGCTGC 989 28 100.0 32 ............................ ATTAGATGTTGATGAATCTTTGGACGACAAGA 929 28 100.0 32 ............................ ATATTGAGTCGTATCTATAAGTTGTAACGATT 869 28 100.0 32 ............................ ATAAGCTGTCGGTGTCCAAGCAGTCCCAGAGG 809 28 100.0 32 ............................ AATATTAAATAAATCCATTACTTTAATTTTTC 749 28 100.0 32 ............................ TGATAAATCTGCACTATATTGATTCTGTAAAT 689 28 100.0 32 ............................ AGTTTACTACGGTATGAAGGCAAACTCGCTTT 629 28 100.0 32 ............................ AAACTATTGCTGGTATTGCTCATGGTGGTATG 569 28 100.0 32 ............................ ATCGTGTGTGATTTTGATATTTGGATCTTTAT 509 28 100.0 33 ............................ AAGAAATCAGGCACATCAGCATGAGCGCTAACA 448 28 100.0 32 ............................ TTTCGACTATTTCTCTAACAAACAGTATGCTC 388 28 100.0 32 ............................ AAAAAGAGCACGGATTAGAGGTGAATCTGTAG 328 28 100.0 32 ............................ GTTATTGCAGCAAGACGGCAATGGTACGCTCA 268 28 100.0 32 ............................ ATTCTCAACTTTAATACGTCTAGGTCGCTGAA 208 28 100.0 32 ............................ TCGACATATAGTGATTATTATGATGATGATAA 148 28 100.0 32 ............................ AACTTTTGCTATGTCTTGGAATGATATAAAAG 88 28 100.0 32 ............................ AAATATAGAAATGCATTGTGCTGGGTTAATTC 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AATATTCGTAAATGGTTAGAACGCTTGGTTGACTATGTTCATGTCAGTTCTATACGTGAAGTGCCTGAGAATAAAGTCACAGGTTATGCCATTTATAAACGTAAGCAATTTAAAACTAATGCTGAGCGTTTGGCACGTCATCGTGTAAAACGTGGAGATATTGGGTTTGATGAAGCACTTGCTCGGTATAGCCATGTCGTGAAGACCACCAACTTACCGTATATTGACATGTTGAGTTTAAGCACTTCAGATGAACAGGACAAAAAACGATTTAAATTGTTCATTGAAAAGAAACCTGCTGAAAAATCTGAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGAAGCATCTGTACCCGAATTTTAACCCAATATTTTTTGACTCTTTAACAATTTAATAAAATCAATAAGTTATAATAGTGAGTGAAAACTTGGGTCTTTTGCTAGATTTTAGGTTTAACTCACTGTTATGGCTTTATTTTTTGTGCTAATTTTATA # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-268 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZRE01000065.1 Acinetobacter brisouii strain SM1 contig_65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ TGTTAATTGAGCGGGTAGTGTTGTTGTGAGTT 61 28 100.0 32 ............................ TTTGTTTTAGTGTTTTACATTTAATAAAAGCA 121 28 100.0 32 ............................ GTAACATGGCTTTGTGAGTTTTACGCCTGACT 181 28 100.0 32 ............................ ATTGTGCAAAATGTTGTACGGAATACGGGCAA 241 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : | # Right flank : | # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50-257 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZRE01000061.1 Acinetobacter brisouii strain SM1 contig_61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50 28 100.0 32 ............................ TATTAAATTCCTCTGCTGTATATTTTTTCTTA 110 28 100.0 32 ............................ AATATCGCATATAAGAATTATTGATTTAACAA 170 28 100.0 32 ............................ AAGCACTACATCGCCAATCAGCGCAGAGAATT 230 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TATAGGCAGCTTAGAAATGATCAGGATTGTGTTTTGACCAGCGATGCAAG # Right flank : | # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1050-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZRE01000016.1 Acinetobacter brisouii strain SM1 contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1049 28 100.0 32 ............................ AAGAATCTCAAGGATGATGATTGGACAAAGCT 989 28 100.0 32 ............................ GTATTTGAATTTCATGCGGCGCGCCATTTCCC 929 28 100.0 32 ............................ TTGAATGAAAATGCAGTATTAATATTTTTAGA 869 28 100.0 32 ............................ ATAGACGGCAATGCTGCAACATTGCTTCCAGT 809 28 100.0 32 ............................ ATATGAACTTTGCATTGTGAAGTCTGTGCTTA 749 28 100.0 32 ............................ TTTGACGATGTTTCCACGTTTCACAACAAGTA 689 28 100.0 32 ............................ TATCAATACGACTATTTACATCACCCTCACCA 629 28 100.0 32 ............................ AGCCCGTGCAGCCTTGCAATTGGTTGGCGAAA 569 28 100.0 32 ............................ AATCGTCAATTGATAAGTTCCGTCAGATTGTT 509 28 100.0 32 ............................ AGTAGTGCAAAATACAAGTGGGAATGTCTCAA 449 28 100.0 32 ............................ TTTGAATCTAAATGCAAATGAGAAAATACAAA 389 28 100.0 32 ............................ AGCTGGCTGACTAATTAAATACTTTGCAGCCA 329 28 100.0 33 ............................ CAAGGAAAGCAGCTCTAAAGGTAGCGTAGAAAT 268 28 100.0 32 ............................ GTTCCGAGTGTTGCGCCAGATGGAACAGTTAT 208 28 100.0 32 ............................ TTTAAAAGGGATGAAAAAAGTGCCATTAATTA 148 28 100.0 32 ............................ TTGGTCGTACAACGTATGCAGCAAATGCAACT 88 28 100.0 32 ............................ ATGAAGTTAGCTTAATGCTTGAAAGAGCAAAT 28 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : ACAAAATCGGTGGCTATTCAAATACCCCAGCG # Right flank : A # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //