Array 1 2033294-2034724 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065383.1 Atribacter laminatus strain RT761 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2033294 30 100.0 35 .............................. TACCACTTGCTAATTTTCGGGAGATCCATTAGCAA 2033359 30 100.0 38 .............................. TAAACTGATTTTGGATATGTTCGAATTTCTTTAATTTC 2033427 30 100.0 36 .............................. TTTTTTTCACGCTCCTTTAATCTCATTAATTTTTAT 2033493 30 100.0 36 .............................. CTTTATTGATCCTGTTTTGGATTACCAAAACAGGAT 2033559 30 100.0 36 .............................. AAATAGTTTCGAGTAAAATCTTTCGTAACTGCGACA 2033625 30 100.0 37 .............................. TTCCATTGACCGGAGACGTAGCCAAGGGATTTGTCGA 2033692 30 100.0 36 .............................. TACGGTTTATTGCATCCCCACAAAAAATTGTTTTGA 2033758 30 100.0 37 .............................. TGAAATGCCCGGTTAATGCCGGGCATAAGGGTAAATA 2033825 30 100.0 38 .............................. TAACAGCGGTCTTCAAAGCCCCCGATTAAATAAGATCC 2033893 30 100.0 37 .............................. TCTTCTATTGGATAGACATCGATAAATTTTTCTTGTT 2033960 30 100.0 37 .............................. ATCACATCGTCTTCGTCGAAATATTTCCCATGTTCTT 2034027 30 100.0 37 .............................. TTACCTATTCCGATGATGACTATACCGAAAAATCAAT 2034094 30 100.0 35 .............................. TCGGATAGTCCGGCATTAAATTTCCTCCAGCTCGA 2034159 30 100.0 37 .............................. TAGGTACTCATTGGAAAAAACGTTGAAACACTGCATT 2034226 30 100.0 39 .............................. GTTCGTTTGGGTTATAAATACGGGCATAATTATCAACAG 2034295 30 100.0 37 .............................. AATACTTGCAATTCATCCCTTTTTAAGTTTTTTCGTA 2034362 30 96.7 39 A............................. AATCTACTACATATTGTGGCATGAGATTGCACTAACATA 2034431 30 100.0 35 .............................. AGTGCTAAAATTCAACTGGAAAATGATATACTAGA 2034496 30 100.0 38 .............................. AATTATGCTGACTACTGCGGGGATATGGTCATTCGTGC 2034564 30 100.0 35 .............................. TTGGGATCATCGGTTTTATCTACCTTCTCGGTGTC 2034629 30 100.0 36 .............................. CCGGATATTTTGATAGTTGGGAAATAGCAACGGTAA 2034695 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.7 37 GTATTTAGCCTACCTATAAGGAATTGAAAC # Left flank : AGGCTTCAGACTTAACCAGCTATGAAGGGGTTATTAAGCTGAAGTTGTTAAGTGTAGAAAAAGTAACTGAGGATATCGTTTGGCTGCTCTATGAAGTAATAAAATGATCAAAATCCAGTTAATACTGGTTTCACAATGCCTGCATAGGTAGTAGTTTTCGTTAGTAGAGGTGTTACACTCCAATGCTTAAGCCAAGATTCGAAAAAAAAACAATATTTAACTTCTTTCGACTCTAAAGATCTTAGCCAATACTGTGGTAACCAAAAGAAAAACCAGGTCAATAAGATTACCAAAAAGGGAATCGATAAATTTTCGTCGACCTGTAATGATGTAAAATTCCTGGGGGATCGACAGAACCTCAAAGAGCTCATGATAAAACTAAAATAACTGCATCATTAAAACAAAATTGAATCCAATTCCCAATCAATTTTTAATAAAATCATGATATAATAACAAAAAAGGCCGTTTTTTTAAATGCATTTATAGAGCCAAATGAGCGA # Right flank : CCTCAATTATTATGAAATGAGGTGAAAGAATGGCAAGAAAATGTGATCAATGCAATGGAACTGGTCGCTGTAACCACTGTAAAGGATCGGGTAAGAAAAACTATCCAGGATATGGAAAGCCCAGTGATGATCCCTGCGTCTGGTGTAATGGGAGCGGAGTCTGCCAATGGTGTCGAGGGAGAGGTGAGCGTTGAAAGTTCCCAAAATATTTAATCAGAAGAGCTAAAAAGCCAGGATTGAGAGGAAAAAATTAGACCTCTTTCATAAGAGGCGAGGATCTTTATTTGGATTAAATCTTTTAATTTTCTTTACTATTATTGGTCGAGCAAAAATTTTTCTCCTAAGACAAATGGGTTGATTTTTTGCTCTTCCTGAGAACGCTTATCAATCAGAGCAAAACGCTTGGTGTTAAATACTCCATAATTATGAGCAATGTCAAGCAACCGCTCTATTATATATTGCATAGCAGTTGTCCCACCGGTAATGCAACCTTCAATACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 2054345-2055442 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065383.1 Atribacter laminatus strain RT761 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2054345 30 100.0 36 .............................. TTTTCCGGAGATATTCTATGGAAAAAACGTTGAAGT 2054411 30 100.0 36 .............................. AAGCACTGCATTTTGTATCTGGATCGATATCCAGGA 2054477 30 100.0 37 .............................. AACAAGAGCTAAAAAAATATATATTGGATCATAAACT 2054544 30 100.0 37 .............................. CCGACAACGAATTAAATATTTTCAATTCATCCGAATT 2054611 30 100.0 37 .............................. CAAATACGATATAGTTTATAGCGTATCTGTTTATCAT 2054678 30 100.0 38 .............................. TTGGGTTTTCGGGCAATTTTAAAATATTTTTAATTTTT 2054746 30 100.0 36 .............................. TTACTGTAATTATTGCTTATATCTTGTATCCTATAT 2054812 30 100.0 36 .............................. AATTTTTTAGTGCTGCCATTGATCCTGATGTACTTC 2054878 30 100.0 36 .............................. TTTTTAGGAGATATTCTCTGGAAAAAACGTTGAAGT 2054944 30 100.0 36 .............................. AGGAATTCTCATTAGATCGGTCATTTTACATGGACG 2055010 30 100.0 38 .............................. AAGCAAATGCCGGTGAGTCCTAATCTTGTAATGTCTTT 2055078 30 100.0 37 .............................. AATCCGATTGAATTGCGGGTGTTTGATTCACTTTCAA 2055145 30 100.0 37 .............................. GGAATATCCATTAGCAACTCTAACAACTCAAAAAATA 2055212 30 100.0 38 .............................. TAAGTATTCTCTGGAAAAAACGTTGAAGTATTGCATTT 2055280 30 100.0 37 .............................. TACGTTTGTTAAAAACTCATGTAAATCATCGGCTTGA 2055347 30 100.0 36 .............................. TGAATTGTATGGTTTTAAGATTAGCCGTGATATTTA 2055413 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 100.0 37 GTTTGTAGCCTACCTATAAGGAATTGAAAC # Left flank : AGTACGAATCCTTAAAATATGTAGAAAGTATTTAAACTGGGTTCAAAATTCGGTTTTTGAAGGAGAAATTACCAAAGCAAATTTTGTTAAATTAAAAGCTGAGTTAGAAAAAAACATGAAAAAGGAAGAGGATTCCGTAATTATTTATGGTTTGCGAACTACTCTTTACAGTTTTCGCGAAACTATTGGGAAAGAAAAAGGAGGAGAAGAGATAATCATATGATTCAACATCTATCGTCTCATAGAAATTATTAGAATAATTTACGGTTAAATTTACAGATGTGTGATTTTATTATTGAACATAAAATTTATCTGTCGACCTCCAATGATGTAAAATTCCCAGGGGATCGACAGATAAATTTTAAACACTCAAAAAAACGGGAAAGCTTATTAGTAAAGATAAAAATCGATTTATACCTCAATAAATGAAACAGCTACATCTGATAAAATAACAAATAAAGGTGCATTTTGAGAGCATAATAATAGAGCCAAATGAGCGA # Right flank : CATGAGATTAAAGGTGGTGGATGAGTAATATTTTGGGATAGACCCACTCGTATACTCAAAAAGGTCCACCATGAGTATCAAATAGGCCCACCTTGGTCATGGAGAGATCCACCTGACATATAATGAGGAAATACACTGTAAAGTGTAAATCTTCATTAGGAGGCTGATCAAATAAATGATCAAGTATCGAGAAATTCTTCGGCTTCACAGCCAAGGTGTGAGTCAACGTGGCATTGCTGCCAGTTGCCAGTGCTCACGGACCACAATCCGTAATGTGGTTGAACGGGCAGAAAGGCATGAGATTTCATGGCCTTTCGATAAAAACATGTCGGATGCAGATCTTCAGGAACTCCTTTTTCCGGAAAAAAGGAGTCAGTCCAATCGAAAAATACCGGATTGCGAATATGTTCATAAAGAAATGGCCAAAAGTGGTGTCACCTTAAGTTTGTTGTGGCATGAGTACCATGAACAATGCCGCTTCAATGGTGAAATCCCACTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 3 2058294-2060188 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065383.1 Atribacter laminatus strain RT761 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2058294 30 100.0 36 .............................. TTAATAGAGTATCAAAAAAATTTTGATACTCTAAAA 2058360 30 100.0 37 .............................. CGGCTAAAACAACCGACAAAATGCCAATATCCCTTGC 2058427 30 100.0 37 .............................. ATAAATTTTTCCTGTTCCTGAAATAATTCTTTTGCTT 2058494 30 100.0 35 .............................. TCAAGACCATCATCATCAAGCGTGTCGGCTATCTC 2058559 30 100.0 36 .............................. AGTGTCATTGTCATACATCCAAAAACAGATTACAGA 2058625 30 100.0 37 .............................. TCTCCACCTTCCCAACTAACTTCAATTCCCATTTTTT 2058692 30 100.0 37 .............................. TACGGTATGATGATTAACCATATGGGGGTATTAGGAT 2058759 30 100.0 38 .............................. CGTTTTCCGTTGTCAATGGTATAAAATGTTTCATCATT 2058827 30 100.0 38 .............................. CTTGAATGACCCCATACCGGAAATGGTCAATCGATTAC 2058895 30 100.0 38 .............................. TTTTGTAAGCTTCACAGAGTTGCTTTAGCAAGATTGGA 2058963 30 100.0 37 .............................. AGATTAGCCGTGATATTTATTTTTACTTAAGAAAATT 2059030 30 100.0 37 .............................. AAAATACCTTGGCATAATAATATTCAAACTCTTCCAG 2059097 30 100.0 36 .............................. AAACCAAACCCATTCAAGACGTCGCACCAGAAGCGG 2059163 30 100.0 37 .............................. CGTTATAGGTTTCTTCCTGCCAGGTTTCTTCTTTTTT 2059230 30 100.0 36 .............................. TTCGACCGCCGTTGTTTTGAGAAGGAGACGAATAAT 2059296 30 100.0 38 .............................. AGGCAATATCCGCAGCTTAACTCTTGGATAGACACCGA 2059364 30 100.0 37 .............................. TCGAACTGGACAAATATATGTGCAAAAAGGGGTTAAA 2059431 30 100.0 36 .............................. CAAAGCGAAATGGATGAGATCGAAAGAGCAAAGGCC 2059497 30 100.0 37 .............................. TCACAATCTCCTCGGAAGGGGATTTTCTTAATTATCC 2059564 30 100.0 37 .............................. TGACTATATCAATAATAAGACTATTTGTGCGCTGAAC 2059631 30 100.0 36 .............................. TCAGCTTAGCAAATCCTATTTTATCAAGATCAGATC 2059697 30 100.0 36 .............................. CTGCCTCGCTGTTTATCGTGCTTCGTACCACGGCAA 2059763 30 100.0 35 .............................. TATTATCAGAATATGGATGAAGGCAACGGACGGAG 2059828 30 100.0 36 .............................. TGTCAATCAGCCATTGCCTTACCTTCCCATAGACGT 2059894 30 100.0 36 .............................. TTAGTTTTTTGTATTGTTACTATTCTTCTTTTCTAT 2059960 30 96.7 37 ............T................. ATATTAAAGATCTACGTGAAGGAGAAAAATTGTGGGA 2060027 30 100.0 36 .............................. TGCCATTTCTGGCGTAATTGCTCGATGGATTTTTCT 2060093 30 100.0 36 .............................. AATCCAATAAAGGATTGCCCGTTCAAATTGAGGGTT 2060159 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.9 37 GTTTGTAGCCTACCTATAAGGAATTGAAAC # Left flank : TCGGCGAAGATACACTAGCAGATGCCATTCTTGATCGTATTGTCCATGATTCCTATACCATCCTTATTGACGGCAAAGTGTCAATGAGGGAACGACATGGGATTAAAAATTGAGCCAGAACTAAGTAATTAAGAGTGTATTTATGTCTGCCGGTTAAAGAGGCTGATGGATAGTACCGACCTCTTGTGGACAACCCTCCGCTTCGTGGACGACCAAAACACGTTGTTCACGCTCTCCACAGCCTCGGCATCTGGTGTTCTATAGAAATCTTAATCTTGTTCCTTCAAACTACCCATCAAAGAGTACTATTCTCAGAACAGTAAAACTCATGATTCGGAAAAGTGGGCTTATAGCTATTGTGGTTCATTTAAACCGTCATATATAGCTATGGAGTTAACGTATGCACCTAGTGGATTTATTTGGTGCACTCGATGGGTCTAAAACATCATACTACTGGGTTTATCATAAGACAATAAACAGTGGAATAAAATGACAACTAA # Right flank : CCTCAATTATTATGAAATGAGGTGAAAGAATGGCAAGAAAATGTGATCAATGCAATGGAACTGGTCGCTGTAACCACTGTAAAGGATCGGGTAAGAAAAACTATCCAGGATATGGAAAGCCCAGTGATGATCCCTGCATCTGGTGTAATGGGAGCGGAGTCTGCCAATGGTGTCGAGGGAGAGGTGAGCGTTGAAAATTTATAAATAATAATTATGCTAGGGGGAAAAGAACCAGGATTGAGAAAAAAAAGATATAAATTCAACATTCGTTTTAAGTATAATTAAAACAAGATCAGGGTAAAATTGCCATAATATGATTATCCATCGATCTAAAATTTTTAGCTTTTAAAGGACTTGATAGCGGTGATTGAGTTATTATTTAGGGGAAGGAGGGGGATTGGGTGTATTTTAAAAAACTGCTGGGAGAAAAGTGTTATCTTTCACCTTTGAATCTTCAAGATTATGAGATTTATACCAAATGGATAAACGACATTGATGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //