Array 1 24770-21314 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOH010000006.1 Coprococcus eutactus strain MSK.6.35 NODE_6_length_232951_cov_358.703, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 24769 36 100.0 30 .................................... AGACGAGTATTATCGAATGAAAGATAAAAA 24703 36 100.0 29 .................................... TGGGCTTCCTGTCTGGGATGATGAAAAGC 24638 36 100.0 30 .................................... GATACGCCAACACTTCAAAGCCCTGACGCA 24572 36 100.0 30 .................................... CTGTGATTTCATCATATTCACCAATGCCCA 24506 36 100.0 30 .................................... AGCCCGCGTATTCACCGTGTGCAAACGCCC 24440 36 100.0 30 .................................... GGTGTATCTTCAACCTGTTCCTCTGTCTCT 24374 36 100.0 29 .................................... GGCATTTACATTAAATAAAGTTTCACTGT 24309 36 100.0 30 .................................... TTCACTTAACTCTCCTACTTTCAGTATCTT 24243 36 100.0 30 .................................... TCTTAAAATCAGCGATTTCATAATGCTCCT 24177 36 100.0 30 .................................... GGCGTGGACGAAGATACAGGCGAAATATTC 24111 36 100.0 30 .................................... TGTTTTGTCCTCCTTAATTTGTTTCACTAG 24045 36 100.0 30 .................................... AATCTCTATTGATTTATTCGTCCATGTATA 23979 36 100.0 29 .................................... TGACAGTTAATACATTGGAGTATCTGGAA 23914 36 100.0 30 .................................... GCGAAAACTCACTCGCAACCGTAACCGATG 23848 36 100.0 31 .................................... ATAATGTAGAAAAGAAATATCTGGGATTTGG 23781 36 100.0 29 .................................... TTCAAGACGGAGAGAGCGTTGGACAGAAT 23716 36 100.0 30 .................................... GCGACATATTCGACAAAATCCACGAACATC 23650 36 100.0 30 .................................... GTCGATCAAACTTGAAAGAAACAACATTCT 23584 36 100.0 30 .................................... AGCTAACGCAATGATAACACATAAGAGAGA 23518 36 100.0 29 .................................... TAAATTAAGTCCGCCGCACCGAATACAAT 23453 36 100.0 30 .................................... CAGTATCTGCATTTTTCATTTTATTTGTAC 23387 36 100.0 30 .................................... TAGTGAAAAGGATCTGGATACCAGCCCCAG 23321 36 100.0 30 .................................... TTTTCCTGTTCCCCTGGAGTATATGTAACA 23255 36 100.0 30 .................................... TGAGTTAATCGTTAATTCTGTAAATGCTGA 23189 36 100.0 30 .................................... AGTAGACGCAGTGGAATTAACTAATGTAAT 23123 36 100.0 30 .................................... TATCAAGGATATAATTTACAAGCGTATGAT 23057 36 100.0 29 .................................... ATGTATTGACGCTAGATGATTGCATTGTG 22992 36 100.0 30 .................................... TGTGGCTACGGTTTCCGAACCTGTTTTTAC 22926 36 100.0 30 .................................... AAGAAAATCAAACTCTTTTTATATGTTGCG 22860 36 100.0 30 .................................... TTTCTTCCCGTAACTCATTTCTTTCCTTTA 22794 36 100.0 31 .................................... CATTTTTACACAGAATTTCATCACACGCTTG 22727 36 100.0 30 .................................... TTCATATCTTATTATGAGCAAAGAAACGTA 22661 36 100.0 30 .................................... CTAAACCCGCCCGGTGCTACAATCTCAACC 22595 36 100.0 30 .................................... CCACACGCTTATTCTTACCGATACCATGCA 22529 36 100.0 30 .................................... CCGATTGCGAGATCATCATACATGAATGCA 22463 36 100.0 30 .................................... TCACGACAGTAAGGTTGATTTTAAAGATTA 22397 36 100.0 30 .................................... TTCGTCGCAAACGTCCTTGATTGCATCAAA 22331 36 100.0 29 .................................... TTTTTATAATGAAGAATACGGCTCATACA 22266 36 100.0 30 .................................... ACACCGCCTTTGTTACTCAGCAATACAAAC 22200 36 100.0 30 .................................... GATTTTGACATTGATGTTTTGACCACTTTT 22134 36 100.0 30 .................................... GCATTTCTTCCCATTCATTAATTATTTTTA 22068 36 100.0 30 .................................... ATGACGAATGGTATAGTATGGTCGCATCGC 22002 36 100.0 30 .................................... GTGACATATTCGATAAAATCCATGAACAGC 21936 36 100.0 31 .................................... GGCGAAAACTCACTCGCAATTGTAACGGATG 21869 36 100.0 30 .................................... TAGTGAAAAAGAAATCATCATAACGGAGAG 21803 36 100.0 30 .................................... TCAGATACCTTTTTCTTTGATAAAGCCTTT 21737 36 100.0 30 .................................... TGTAGCAACTGTTTCTGAGCCTGTTTTTAA 21671 36 100.0 30 .................................... CGTCAACATTCATTGAAAGGATCTGGTCCA 21605 36 100.0 30 .................................... GACCTCCATTGTATTCCCAGTCAAGCCTTG 21539 36 100.0 30 .................................... TCCGGTTGTTAGCCGGATATTCTCGCCCGC 21473 36 100.0 30 .................................... CTAAAATCCGATAAGTAATTGCCAGATTCT 21407 36 88.9 18 ...........C..................G..G.T GGAAGGACGATACACTTT TCA,T [21378,21383] Deletion [21354] 21349 36 75.0 0 ..C......C.........A.....TAA..AG...A | ========== ====== ====== ====== ==================================== =============================== ================== 53 36 99.3 30 GTTTGAGAGTCTTGTAAGTGAATAAGTGAATCAAAC # Left flank : AAGTAATCCAGAAGTTATACCAAGAGATTGATAATTCTGCAAATGACTGGTTTGTTCAGGAAATGGCAGAGTTGCAAGGACAGATTGTTTCAATGATCTCACAGGCAATAGAGACCGTGCCATATGATGTTACATTCGATTTTGAACAGAATTTTCAGGGGTTGTTAAAGTTATATAATGTGCATATTGATAATGAGTGCGATTCATTATTAGAGAAGATAAGTAATTATATTAAAACTCTTCATCGGATATGTCATATATCTGTATTCATATTTGTGAATCTGAAGACCTATTTATCTGAAAATGAATTGAAAGAATTATATATAAGCTGTTTTTATGAAAAAATCCATCTGATTTTATTCGAAAATCAGCAGAAGAAATGTTTGGAATATGAAAAAATGTATATTCTTGATAAAGAATATTGTATAATAGAATCAGATTAACTTACAGCATATGTCTATATGTTTAACTCGGTGAGAACCTCATTTTTACAATTTGGG # Right flank : AAATAAGAAAGGAATTAATTAATGGATAATAATCAAATAACAAATAATCAGTTTAAAGGAATTATAAAGATGATTATAGCACTCATAAAAAGTGATATACCTAAGGAAGAGTTACTAGAATATTTAACTGATTTGGTTGAAGAATAATGTATATATGAGTGTAAACAAAGTGTATGTTGAAAGATATGTAAGAACATGACTATATAGATATAGCAGAATGCTATTTCCCCCCACCACAGCCTTACTTACCACATCCCCTATATGCTATTCGGATTCTGTGGTGGGGAGAGCTTTGTTCTGGTTCCTTTTTATTACATGCTAGAATGTCTTCTGCAGAAATTCTGCATGCGATTTATAGTAGCGATAGTATTCGGTACCCTTTTCCTGACCATACTTGGTTACGAAGAGGTTGTGAATTTCCCGAAGGTTTGCTTTATGCGGGTATAGTTTTTTATAGAAATCATCAATGAGAGCAATACCGGCATTAGAGTAAACAATCG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTCTTGTAAGTGAATAAGTGAATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //