Array 1 194199-188924 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHZL01000003.1 Raoultella ornithinolytica strain BSI149 NODE_3_length_371196_cov_85.180466, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 194198 29 100.0 32 ............................. GATTGCAGGGAGTGTGCTTTGTGGCAGGTATT 194137 29 100.0 32 ............................. TCCATAGCTGCACGGTCTCCTGTGTCGCTGGA 194076 29 100.0 32 ............................. GCGGCAACACTATGACTGTTATGGAGTACTGA 194015 29 100.0 32 ............................. CTCTACTACGACAACGGGTCGCACGCAGGCTG 193954 29 100.0 32 ............................. GTGACGGGCAGATTTACGGGATGTATCTCATG 193893 29 100.0 32 ............................. CCGATCATAATACGGTCGAGCGACATCTGACG 193832 29 100.0 32 ............................. GTCAGGATTGATGACTATCGGCCTTGATGGCA 193771 29 100.0 32 ............................. GCCTCGGTGGATACAGAGAAAAAATCTGCGGC 193710 29 100.0 32 ............................. GTCATATAAACCCTGCTGAAGAGTGCTCGTAA 193649 29 100.0 32 ............................. ACTGCTCCTCTTTGCTGAGAGCGCGGGTTTGT 193588 29 100.0 32 ............................. AACTGGGCGGAGGCAGAGGAACGCGACCGCTG 193527 29 100.0 32 ............................. GTTATCCCGCTCGCGTATGAGATTGACCAGCT 193466 29 100.0 32 ............................. CCATAATATTCACCTTAAAAGAATGATTTGAG 193405 29 100.0 32 ............................. CGTCATAGCCGTTGTCCTGGCAAAAAATCGCG 193344 29 100.0 32 ............................. CTGATCGACGCGATGAACTATCTCATGTTCGC 193283 29 100.0 32 ............................. CAGGTGAACTGGTTGTCACAAGTGGTGAACTG 193222 29 100.0 32 ............................. GATAACACTCGCTCATTCGCTATCAATCTGTA 193161 29 100.0 32 ............................. CGGAGAATCCAACCTTCCACACGCCATGTTCC 193100 29 100.0 32 ............................. TTATAACGGGGTCAATCTATGAGCGGTTATCA 193039 29 100.0 32 ............................. GTATCATCCGCGACAGGCTCGGGCGATTTGTT 192978 29 100.0 32 ............................. TTGATGGTATCAGTGAAGACATCAAAGAAAAA 192917 29 100.0 32 ............................. CAAAACCTCTCCGTCAGCCGGAGTTGTGTTTA 192856 29 100.0 32 ............................. GTTAGCTCCGCCAGCAACATCAGTCACGCGGC 192795 29 100.0 32 ............................. ACCAGTACCGATGGACGTATAACCGGCCTTGT 192734 29 100.0 32 ............................. CCTCCGGAAATCGGAGCCGCTTTACTGGTGAG 192673 29 100.0 32 ............................. CAGTATAAACGCCATTCACGTTCAGGCTTGCA 192612 29 100.0 32 ............................. GGCGCATAGCCCAACCATTTTGAACAATCAGC 192551 29 100.0 32 ............................. ACCGCGCCGGTAACGTAGTTCCTAACGCAACT 192490 29 100.0 32 ............................. AAATCAATATCCGTTTACGCCTGGGTTAAGGC 192429 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 192368 29 100.0 32 ............................. CATTTGTCCAGTAACAACCCGTCTACCCATAC 192307 29 100.0 32 ............................. ATCATCTCCATGCCGTACCAGGTTTTGCGGAG 192246 29 100.0 32 ............................. ATGGATGTATGGGTGCTTTTCGGAATGATTCT 192185 29 100.0 32 ............................. ATAGCTTAAAACTTTATAGGTTCCGTTAATAA 192124 29 100.0 32 ............................. CCAGCCGGGAGAAGTTTGCAATCCAGTTGCCC 192063 29 100.0 32 ............................. ACGCACGCGACACATGGCGCAGCGTAAAACGC 192002 29 100.0 32 ............................. CGGTGTTTACTGGCGCGGTGACACCCGCCCGC 191941 29 100.0 32 ............................. TACAGGTGAGCTTTTCCCATCCTGGTATGTGA 191880 29 100.0 32 ............................. CGTTCGAGAAGACCCTTCGCGGTGAGTACGCC 191819 29 100.0 32 ............................. CTGGCATTAATAGTCACTGAGATGGTTTACAA 191758 29 100.0 32 ............................. CTCTTTCGCTACCGCCGTGATTACCTCTTTTG 191697 29 100.0 32 ............................. GTATTTTTAATGGGGGTATAGGATGGGTGTTT 191636 29 100.0 32 ............................. CCATCGGACACAGGAGAGTTAAATCCGATAGC 191575 29 100.0 32 ............................. CGATTGATGAAGTCGGTAACATGTTTATTACT 191514 29 100.0 32 ............................. CCTGACTACCAAATGCATCTACCGCGGCGCCC 191453 29 100.0 32 ............................. ATTATCTACAGCCAACTTACTACGAATAGAAT 191392 29 100.0 32 ............................. ATAGCAACCATCGTTGGATGAAAACTGGCTGG 191331 29 100.0 32 ............................. ACGGTGATCACCCTGACGTTTGTCATTTTTGC 191270 29 100.0 32 ............................. CACAACGTCGACAACGGCGAGGCTGGCTCTGT 191209 29 100.0 32 ............................. GTAGTGATGGCGGTGGCTCCGGTGGTGGTGCG 191148 29 100.0 32 ............................. CGAGAGATCAGGCCAGGAAAATTACCTTCTCC 191087 29 100.0 32 ............................. AACAGAACGTACTCCCACAGCGTTCTCAGTAG 191026 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 190965 29 100.0 32 ............................. CCTCTTGAAACTCAGGATAGTACGTTAATACA 190904 29 100.0 32 ............................. ATAACGCTCAGGATATAATCGCTGCCTGATGT 190843 29 100.0 32 ............................. GAGCGCGGGATCCTGACCTGGGGTTACGGCCA 190782 29 100.0 32 ............................. TGTCGTTTAACGGGTACGAGTGGTCCGTTGTC 190721 29 100.0 32 ............................. CGGGATCTGCGGTATCGCGTAACGCAATTTGC 190660 29 100.0 32 ............................. TCGCCGACGCTACCGCTAACGCCGCGGCCGCC 190599 29 100.0 32 ............................. CCAACAGAATCCGCAGACAAAATGATGTTTGA 190538 29 100.0 32 ............................. GATGTGTACACGTCCATCCCTGGCTATGTGCT 190477 29 100.0 32 ............................. GTCCTTGACGGCATTAATCACTCAGGGCTTGG 190416 29 100.0 32 ............................. GTACCGTATCAGGGCGTTCGTCCGACGCGACC 190355 29 100.0 32 ............................. ATACTCGCCGCAAATTTCAGCCAGTTTCCCGT 190294 29 100.0 32 ............................. TCACTGTTTGTACTTTGACGTTACTTGCTCAA 190233 29 100.0 32 ............................. GACGCCATGTGACAGTGGATGGTCGCCTCAAA 190172 29 100.0 32 ............................. ACTGGAACGCACCAGTGCCTGGTCCAGCACCG 190111 29 100.0 32 ............................. CAATATCAATTTCCCGCAGGATCAACGTCCCA 190050 29 100.0 32 ............................. CTCATCTCCTTCAAACCATGCCAGCTTAACAT 189989 29 100.0 32 ............................. CGGCTATTCACACGAAAGCAGCTACCGCACCT 189928 29 100.0 32 ............................. GTAATCCCAGACTGCAATAACAGTGGGGTAGC 189867 29 100.0 32 ............................. CGGCGCGTCTGAATGTTGATATTTTAACCATT 189806 29 100.0 32 ............................. TGTCTGTTTAACTCTGTGGATAACCTGGAGGC 189745 29 100.0 32 ............................. CCGTTGGTGTTTGTCCTCGGGCATATTGAAAT 189684 29 100.0 32 ............................. AATATCAGCATGCCGCGCGCTGCCCAGCTCAG 189623 29 100.0 32 ............................. ATGCCATTGCGAACACTACAACTGCGATAAAT 189562 29 100.0 32 ............................. ATGACGAAGATGTGATATCTGCATATGCAGGT 189501 29 96.6 32 ............................A CCACCACATCAGAAGCCGACGATGGCGATGGC 189440 29 100.0 32 ............................. TTGGATCATTTCTTCTTCAACATTCTCCCACG 189379 29 100.0 32 ............................. CTTGCTGCACGTTGGGGTATCTCTGAGATCAG 189318 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 189257 29 96.6 32 ............T................ CTATATATTGTCTGGTCATCATCACCGACTAT 189196 29 100.0 32 ............................. GTTCGGCAATCGCCCTGGTGCTGCCAGTGGAA 189135 29 100.0 32 ............................. CTTTCACGTTTGCTCATAGGGATTTTTTTTCC 189074 29 100.0 32 ............................. TGCAGATATTTCCCTGATTTGGGGATCCAAGA 189013 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 188952 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================ ================== 87 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGACTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : CAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAATGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //