Array 1 7841-8595 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASJD01000018.1 Bacillus safensis FO-36b contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 7841 32 100.0 34 ................................ CACCAACTAAAACGCCCGCCAACCCTAGACTAAT 7907 32 93.8 33 ...........C.................C.. TTGCGGATCAGGTTGCTGCTCGCCTTCTCCTTT 7972 32 100.0 33 ................................ TTGCGGATCAGGTTGCTGCTCGCCTTCTCCTTT 8037 32 100.0 34 ................................ CACCAACTAAAACGCCCGCCAACCCTAGACTAAT 8103 32 96.9 33 ...........C.................... TTGCGGATCAGGTTGCGGCTCGCCTTCTCCTTT 8168 32 100.0 34 ................................ CACCAACTAAAACGCCCGCCAACCCTAGACTAAT 8234 32 96.9 34 ...........C.................... TTGAGTGTGTTTCATCCAGCCTTTCAGATCATAG 8300 32 93.8 33 ...........C.C.................. GTTAGCATTCCAAGATTTTTATCTAGCGCAATT 8365 32 100.0 34 ................................ TTGAGTGTGTTTCATCCAGCCTTTCAGATCATAG 8431 32 87.5 33 .C.........C.C..........C....... GTTAGCATTCCAAGATTTTTATCTAGCGCAATT 8496 32 100.0 35 ................................ CCCACCAATGAAGGTTATCTCCACTTCGGATAATA 8563 32 90.6 0 ..T................G.......A.... | T [8592] ========== ====== ====== ====== ================================ =================================== ================== 12 32 96.6 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ATACCAGAGACGGTAGGAGAAACATTCAAAGTAGATGTCATGACCCCACATCATTCAGACTATAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCTATCAGAAGATGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGCGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGAACCGTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTGAGTGTGAAAACAAAATTCTATATAGAAACTTGAGGATTTTAACGATCATTTCCTAAAAAATGTTATAATTAAGGCGGAAATCGCA # Right flank : TTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAAGTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAATTTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTACATGAGCGCGTGGATTGAAATCATTCTCTTGATTTATAAAAACTTGTTGATTGTGTCGCACTCTACATGAGTGCGTGGATTGAAATAAGCGCACGTCTCAATTGACGAGCTGACGGCATATCGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTCTGTTAATGATCAGGAAGGATTCGAACCGTCGTCGCACTC # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:-3, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 8887-9117 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASJD01000018.1 Bacillus safensis FO-36b contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8887 32 96.9 33 .................C.............. CATTCTCTTGATTTATAAAAACTTGTTGATTGT 8952 32 100.0 36 ................................ AAGCGCACGTCTCAATTGACGAGCTGACGGCATATC 9020 32 100.0 34 ................................ TCTCTGTTAATGATCAGGAAGGATTCGAACCGTC 9086 32 81.2 0 ...........T......AT.A...G.A.... | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 94.5 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GGATTGAAATTTGAGTGTGTTTCATCCAGCCTTTCAGATCATAGGCCGCACTCTACACGAGTGCGTGGCTTGAAATGTTAGCATTCCAAGATTTTTATCTAGCGCAATTGTCGCACTCTATATGAGTGCGTGGATTGAAATCCCACCAATGAAGGTTATCTCCACTTCGGATAATAGTTGCACTCTATATGAGTGGGTGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAAGTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAATTTCTATATAGAAACTTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TTCTTGTCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAATAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTAAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTAGATTGAAATCTTCTGAAAACCCCGTCACTATTTTACCTGCAATTGTCGCACTCTACATGAGTGCGTGGATTGAAATTTTTTTTACTGGTGTGTAATAAGGCGCCACAGCCGTCGCACTCTACATGAGTGCA # Questionable array : NO Score: 8.58 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 9463-9692 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASJD01000018.1 Bacillus safensis FO-36b contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 9463 32 100.0 35 ................................ CTTCTGAAAACCCCGTCACTATTTTACCTGCAATT 9530 32 96.9 34 ......................G......... TTTTTTTACTGGTGTGTAATAAGGCGCCACAGCC 9596 32 93.8 33 ....................A.G......... GGTGAATGGTGGGAAAAGACAGGAAAGCCTGGT 9661 32 71.9 0 ...A.....A....A.....A.....CACTG. | ========== ====== ====== ====== ================================ =================================== ================== 4 32 90.7 34 GTCGCACTCTACATGAGTGCGTAGATTGAAAT # Left flank : CATGAGTGCGTGGATTGAAATAAGCGCACGTCTCAATTGACGAGCTGACGGCATATCGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTCTGTTAATGATCAGGAAGGATTCGAACCGTCGTCGCACTCTATATGAGTATGAGGAGTAAAATTCTTGTCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAATAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTAAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATCGCA # Right flank : TTTCTGCGAATTACATAAATTCAAATATCTATCCCCCCTAAATCCAAGCCTTACAAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCTATATGGCAGATCGCGACAAAAGGATAATGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAAACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCTTGTTTGGCAATTTTCATAATTTCAGTATCAGGGACCGGCACCCGGTTAAAGGTGTCTAAAATGACGACCTCTCCATTCATACTGCGCCCAACATGGAAAGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATCGTAGGCGAAATAATAATGTCTTCAATTTCATCGAATCGTGCACGTAGCTGAC # Questionable array : NO Score: 6.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTAGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.30,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 99330-99624 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASJD01000010.1 Bacillus safensis FO-36b contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 99330 32 100.0 33 ................................ TTGAAAGCAACACTTCTAGTCTGTTTTGCTTTA 99395 32 100.0 35 ................................ CATTATGTTTCCTGTACCTGCATAGGCGTATCCTC 99462 32 100.0 34 ................................ ATAATATTGCCCGATCCTGCATAGGCGTATCCTC 99528 32 96.9 33 ...........T.................... ACAGTAGCCGTATTAATTACAGGTCTTATATTT 99593 32 81.2 0 ...........T....A..T.A...A.A.... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.6 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATAGCCGATCAGTTAGGCGAAACAAGACAAAACATCTCAAACATACACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGCACGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAATAGACCGGCTGATTTACCAAGAAGGACCTGGATTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGGAACTGATGGTGCGAATGTCAGGTGAACATAAAATCCCTGGAACATTCGCACCTTTTTATTCGACAAAACTGGGTAAAAATGTATATTTCATGAAGGAGAAAACAAAATTCTTTATTGAAAGTTGAGGATTTTACCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TTCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATTCCTGAGGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTTCATGAAGGAGAAAACAAAATTCTTTATTGAAAGTTGAGGATTTTACCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATCATTATGTTTCCTGTACCTGCATAGGCGTATCCTCGTCGCACTCTACATGAGTGCGTGGATTGAAATCATTATGTTTCCTGTACCTGCATAGGCGTATCCTCGTCGCACTCTATATGAGTGCG # Questionable array : NO Score: 8.64 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //