Array 1 1377767-1379910 **** Predicted by CRISPRDetect 2.4 *** >NC_015151.1 Vulcanisaeta moutnovskia 768-28, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ===================================================== ================== 1377767 25 100.0 42 ......................... ATTGTTTCCTTCATATACGGCTGGGAGACACGTGATTCCACC 1377834 25 100.0 40 ......................... GACATTGTTTTTCAACTTGCCAGTATCACGCCCGTCTCTG 1377899 25 100.0 53 ......................... CTGCAAGGTAATCAGCAAGTCAGTCAGCAAGTCAATCAAGGTAGGGCTACCGT 1377977 25 100.0 42 ......................... GGACGAGCCGAAGCGTGCTGATGAAATACTCACGAGTGTTTT 1378044 25 100.0 44 ......................... ACGCCTTCACCCTATCACCAAGCGTGTAAAAACCACCGTTCTTC 1378113 25 100.0 38 ......................... ATGTTTTCCTGACCCTCAAACCACGAGTACAGGTTGGG 1378176 25 100.0 49 ......................... CGACTTCATTAGGGAGAACAAGGATGAAATCGTGAGGGTGCTGGACGAG 1378250 25 100.0 45 ......................... TCACCACGGTGATTGTCTACACACTCACCCTGCAGTTGAGGGGTG 1378320 25 100.0 47 ......................... ACAATGTGCTCGTGATTAACATATACCCCTCTAACCTAGGTCCGAGG 1378392 25 100.0 45 ......................... GGAAGGAAGCCATGCAATTAATCAAGGGTTTAATAAACGTGAAGC 1378462 25 100.0 48 ......................... AAAAAAATCACTGTGTGAAACTATGACTTTCTTACCATCCTTAGTGTA 1378535 25 100.0 46 ......................... AAACTGCCCCTGCAATTGACTGCTCATTAACTGTAGTGACTGCACG 1378606 25 100.0 47 ......................... CTCATTGCTGTACAGGTTAATGAATGCCTCGGCATTCCTGAGGACGT 1378678 25 100.0 51 ......................... TCATTTCTGGGGTTTTGACCTTCCATTTGTACTGGGGTTGAAGTTCTGCCG 1378754 25 100.0 41 ......................... CCACTCACGTAATCACCAACACCATTATGGTTATTCGTTGC 1378820 25 100.0 45 ......................... GCAGCCGCTAGACTACCCGCAATACCTGCAGCCTCACCAATCGTG 1378890 25 100.0 44 ......................... ATCAGATATATCCATCAACCTAGAGGCCGGAAGGTACGTGAACA 1378959 25 100.0 44 ......................... CCGTGATTGTGCACGTCGCCCCCGTGGGGCTCGCCATGAGTATG 1379028 25 100.0 48 ......................... GTAATCATTCCAAAGGAAAAGCCCATCATCATTAATGAAAACAATAAT 1379101 25 100.0 50 ......................... GGAATCATTGCACATGAACATTACGGTGATGGTGCATGACGGTCATATTC 1379176 25 100.0 45 ......................... TAACCGTCATGTTAAGCGTGAACACCGGCGCGGAGCTACTTGAAC 1379246 25 100.0 52 ......................... CTTGATGACACATAGATAAAATAAAGCAATGCGATGTCAATCCCAATGACCT 1379323 25 100.0 42 ......................... CTCTCCCTCTGCTTGAATACGTAGGGTACCTCGATGATCCTC 1379390 25 100.0 47 ......................... ACTTCACGTGCCCAAAGTGCGGGAAGCCAACCATAGGCTTTGCGCCC 1379462 25 100.0 44 ......................... ATTACAGTACTGCTTGTCGAAACAAAGCAGTAAGTCATGTATTT 1379531 25 100.0 44 ......................... CATATTGGACAACGTAGCCCGAGCTTTCCAATCATTTCAGCACG 1379600 25 100.0 47 ......................... ATCTTCGATATCCTCGAGCAGAAGAACAGCGAGCCCGGCGCGAACAG 1379672 25 96.0 47 ........................G AATGACCTCACTCCTACTTGGGAATAAGCCAGCGTATACGAGCCCAT 1379744 25 96.0 45 ........................G ATACGCATCTACATTGATTTGGCAGTGGTTTAACGTGACGTATAA 1379814 25 96.0 47 ........................G ATAAGAGCTACATACATAGACTTTGGAGGGATAGTTTGGCATATCAC 1379886 25 72.0 0 ...G..T...G.....G..G..G.G | ========== ====== ====== ====== ========================= ===================================================== ================== 31 25 98.7 46 GATATTCTCTAAAGAGAATAGAAGT # Left flank : GAGTGTTGAGGAGAGGGTTATTCCCTGGCCCGTGGTACCTAAACTGGCTGACCTAATGCTTGATGAGTACAGGGTTCTAAGGTTGATAGGCCTTGGCAAGCATAGGGCTAAGGACATACTAAACGAGTATAGAAAGGAGTGTAAGAAAGTAAGTGAGTGCATGTCGATGGCCAAAGTGCAAAGAATACTTGTGAGGCTCGTTAGGAAGAGATTAATTAATTATGAGAAGAGGGGTAAGGCGCACCACTATGAATTAACGCCGTTAGGTACAATACTAGTGGGCACAGTAAAGACGCAATAGCGCAATGCATGGGATAAATAATTGTGGGAACAACTACAATAATAAGAAACTGAACACAAACATCAGAATAATAAATAATCTGACAAAACAATCGTAAGAACAAACACGTACCATAAACGTACATAGATATAATTATTCCATTAATTAGCTCATATTCATGAAGAAAGACTTATAAATAAGCTTATAAAATAACGTCTTA # Right flank : GTTATTTTCTTTGGTGAAGTGATGTTGAATTAAATGTTATTGTTTTGATGAGGTATTTTATGGTGGGCATATGTCTTTGAAGTAGCAGGCTTTGCATTTTGCCTTGTTTGTTGTTTTTGGTGGTAGTTCTTGGTTTTGTATGTGTTTTCTCATGTCCTGTATTGCTCTTTCTATCCATATTCTTAGGCTTGGTGTTGGTCTTATTGTGATCGTTACTTCTCTTTCCTGGTTTATGATTAGTATTTTATCCACAGTAACTTTCATGGTTTCTTCAATAGCCATTGCATATGCCGTTGCCTGCGCCAGTACATGGTTATACTTCATGTATAGCTTCTTCCTACTTCCTATGTTTAACTTCGTCTCTATTACTACTGCCTTACTTCCGTTTATTACCACGGCATCTACCCTGCCTACTATACCGAGTTTTGTGGATTTCACAGGTACCTCTAGCTTGATCTCTCCCTGTATTCCCTGTTCTCTTATGATCCTTATTATTTTCT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATTCTCTAAAGAGAATAGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1453136-1452274 **** Predicted by CRISPRDetect 2.4 *** >NC_015151.1 Vulcanisaeta moutnovskia 768-28, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =================================================== ================== 1453135 25 100.0 44 ......................... ATCTTTGTACGGTGATTCCCACGTACAACGAGGCTGAAAACATT 1453066 25 100.0 44 ......................... ATATGATCCAGGATTTATGACTCCCGTGTAAGGAGATTGTTGAG 1452997 25 100.0 44 ......................... GCGTGAATTCCACCACTTCAACGCCTTATCAAACAGCTCTCCAT 1452928 25 100.0 45 ......................... TATCATGAAGAGCTCGCCCCTTGGGTCGTCACCGTGCTCCTCCTT 1452858 25 100.0 42 ......................... CGTGAACCTGCTTGTGTTGTGGCTGGTGATGCTACTTACCCA 1452791 25 100.0 47 ......................... GGATTATTTTTACACAGTTCCCAAAATTCGTTGACTTCGTTTTTGTA 1452719 25 100.0 45 ......................... AACGCAATCATTATCCACGGCTACAACAACGCTGACGGTTCAATA 1452649 25 100.0 43 ......................... CTACGGAAATAAACTAGCAATCTGAAAAATAATCTCGTGGTTA 1452581 25 100.0 44 ......................... ATGTCTATGTAACCGTCACTTACAGGGTCTTTATCAAAATAATG 1452512 25 100.0 42 ......................... TGAACGCTGACGGTCTTGAAAGTGGCGATGCCATTGCCACTT 1452445 25 100.0 51 ......................... GGTCTACACACTTTAGTTTCATTCACCATCACCATAATCGCATCCCAATTT 1452369 25 100.0 46 ......................... TCCTCACTACTTCCTCTACCCTCATTTGCTCCGCCTGGTAGGGCTT 1452298 25 96.0 0 .................G....... | ========== ====== ====== ====== ========================= =================================================== ================== 13 25 99.7 45 GTTGATTTCAATAGAATATTGAAAG # Left flank : AGGGCGTTCCTGGGCCCCACCAACGCGCCGGTGACTACGTAAACATCGACACCCTCAAACCTAAGCCTTGAGGATTGGGAGTCTAGGCCGAGAACCACACCCACACTGCCAACCTGGCCCAGGGCCTCAACCCTCCCTGTCGTGAGCTCGCCCTTGCATGAAACCTCGAATTGATCGCCCTCGGACAAGTCGATGGAATCCTCAGGTATGAACTCACCAACGAAATCCCTCAATCGCTCTAAAGCCCTAACAAAGCCGAATAACTCCCTCACACAGAATTGCAATAGAAAACCAGGGAAATAAACCTAACTAAGCAAGGCTCGTTGGAACATCTACGTTCATGCAAAATTGAACGTCATCACCAGAACAAAAAATAACACCCAATAAATACCGTCAGAACAAATCCGCATCATAGATGTCCATGTGGATTTATGTTCTTATTAATGCCAAGCCGAGGGTATGGGTAATGCTTATAAATGGGCTAATAAAGTGGCGAATCA # Right flank : AAGTGCGATGAGTGTTTTAGGAAGTTGGTTTCACAATAGTTAGATAGCTGGTGGGCTAGTTGTGTGGTGGTTCCGTGATTTAATCCATGATCGAGTTCAATAGGGGTCATTATTGAGGTAATGCGCCAATGTGTGGATTACTAATCATGCCGCGGACATTCTCAATGATTGTCGGTTTCGGGGCTTGTTGAGACGATGACTAATAGGATCATTAAGCTTGGTTGGGTTGGGAGGGTTGGCGTTGTCTTCGCAACACATGCCAAGTGACTTGAATGGCCCTGGTTTTTGAGTTGTAAATCACTGGGTCTATTGGGCTGAGCTTGGCTATCAGCGTCATGATAAGCTCATTACCGTTCAACGCCAGTAGTGTAGCGGTGCTCTTTGCAACCTCGCACGTATATAACCAACCTACCGCTAGCCACGCCCTGAGGGTACCTGACCATTAGGTACGTCTCATCACCACCAATAGGGTTAGAATAACCATTAAATCGCCTTGACTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCAATAGAATATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1470871-1469719 **** Predicted by CRISPRDetect 2.4 *** >NC_015151.1 Vulcanisaeta moutnovskia 768-28, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================= ================== 1470870 25 100.0 42 ......................... TCTATAATCTGCACACTTGCAATGTAATGTGGATTCCCAGGA 1470803 25 100.0 47 ......................... TGGGTTTCCCCAAGGTTTTCGGTTTGGGTTGTGGTCATGTGTTTTCA 1470731 25 100.0 48 ......................... CATACATTGTGGCTCCACCACCTAGGTCGGTACCCATATTGTCCTCGG 1470658 25 100.0 42 ......................... CGCCAATAGGTACACAGCCTGCGGCGGTTAATGAGCAGTACG 1470591 25 100.0 49 ......................... CAGTTACACACACATGATTCATTTTGGTATATTTCAATTATCACGTTTC 1470517 25 100.0 47 ......................... TAAGCAAGAAGTCCAGGTACTGCTCTGACATCACTATTATGTACCTT 1470445 25 100.0 48 ......................... GTACTGTATTAAGTCGTCAACGGATATTGGAAAACCGTGGTTCTTCGT 1470372 25 100.0 47 ......................... ATTAAGGACTCTCCCATCAGGCAGCGCTGCTTTTGAATAAGTCTTAA 1470300 25 100.0 42 ......................... CATTCCTTCACGCTTGCCTTTCCCTCTGACATAACTATCACG 1470233 25 96.0 43 .................G....... CTACACTCACAATCACAGTATTCCTCAATGCTTTCCTCTGGGT 1470165 25 100.0 42 ......................... TTGCAATGTCGCGCATATTTGCTACAATATCGTTCAATTCGT 1470098 25 100.0 44 ......................... TCCAATTGTTTTGTGCCACGCACCATCACCTCACGCAATTCTTC 1470029 25 100.0 49 ......................... TTCTCGCAGTCCTTGACGCTCGTCGGGTCGAGAGTGTACGCCGTGTAGA 1469955 25 100.0 46 ......................... CCTTATGTATGTCTCGCGCCAAAATAGCAGGCACAAGCTCAAACAG 1469884 25 96.0 47 .............A........... TCATTAGTATGAACAAGTAGTGAACCATCGGGCTTGATTATTATCAA 1469812 25 92.0 44 .................G.....G. ATTGATTGCTTAGTTAGGTATTTCTCTGCGATTGCTTAGGGTAT 1469743 25 68.0 0 .........CGAG....T....TGT | ========== ====== ====== ====== ========================= ================================================= ================== 17 25 97.2 46 GTTGATTTCAATAGAATATTGAAAG # Left flank : ACCTAGCGCCGATACCCTGAATTGAACCGCCTCGCCAGGAGCGATGATGTGCCTACCTCTCCACAGTACCTTGCCCCTAAGCGTGAGTGGTGTGACGCTCATGGGCTTTGGACCCCTCGAGTCGTGAATACGCCTAGCCAGCTCGGCATCCACCGTGCCCAGTATGTTCAGGGTCACGGACATGGCTATGGAGCCTGTGAAGTTGGTTAAAACGAGAGCTGACGAGGGCCTAAGGGCAATGCGGAAAACAAAAACAACACCCACAAAGCCAAGGCGCACTAAGGATTTAAAAGCTAAGTGAGAACAACCTTAAATAAGGCTCGTTGGAACACCCACATTATTGCAAAATTGAATGTTAACGTGGGAATACCAATCAATTCCTAATAAACACCGTTGGAACAAGCCCACACCGTGAATGATCGTGGGAATACCCGCTCTGATGAATACCAAGCCGAGGGTATGGGTAATGCTTATAAATGGGCTAATAAAGTGGCGAATCG # Right flank : GGTATTGTCTTTGCCTGTAGTAAGTTCGGGGGTTCTGTTGATTTAGGGTTATGAAAAAAGCTGGGCTAGCTTGGTTCTTGGGAGAGTGAGTGTGGGGGTTAGTAATGAGGCTGATTTTCCTAAGAGGTGCCTTGCGGTTACTTGTTTGTGAGTATTTCGAGTAGTTTCTTTACCCATTCCTTAACGTGTACCTCGCTGTCGGTTATGCCTACTAACTCCTTATCCGCGAGGTCTTCAACGTCAATACCCAATTGCTGGAGTATGCCCTTGCTTGTTCCCTTGCCCTTCATTATCTGCGTGAGTGCGTCTACGTACCTGGGGTCTATGGTTATTGGAAGCATTGGCAACTCGACTATTTCCCTGAACGTCTCGTGTATGTATATCACCCTCCACGCCCCTGCCAGCATCGCCATGAGGGTTAGGTACGCGGACTCAGGCTTGAAGCCCCCTGTCGGGTTTACAACGACCCTGTAACCACCCCTCCTAAGCTCAATCACCCT # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCAATAGAATATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 1482365-1482074 **** Predicted by CRISPRDetect 2.4 *** >NC_015151.1 Vulcanisaeta moutnovskia 768-28, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 1482364 24 100.0 41 ........................ GACAACCTCAAGGACTTGGGGCGGTGGTACATCAACATATT 1482299 24 100.0 40 ........................ GATGCACAACCGCGTTAATGGATTCCTTAATTACTGCCAG 1482235 24 100.0 44 ........................ CCTTGAATTCGTCTGCGGTCATGAATAGCGCCTTACCCATTTTC 1482167 24 95.8 44 .................G...... CGTATCATGTTTCAGGAGAATTTCGATGTGTGACGTGTCTATAC 1482099 24 91.7 0 ........T........G...... | AT [1482089] ========== ====== ====== ====== ======================== ============================================ ================== 5 24 97.5 42 GTTGATTTCAAAAGAATATTGAAA # Left flank : GTACTTTATTAACGCAGTATTTACGTATTTCCTTGATTGGTTTGTTATCTCTATAAGTCTGTGGTTTCGTTACTCCCTGCTATGGCTGGGTGTGGAGTTGTGGTTTAGGGTTTACCCTGCATCGCCCTCCCACGTGTCTTGACCTTGATTGTTCACTGTCTCTTCATATTCTTGATATGTATTAATGACCTGGTGGTTGAGCCATTATTGTAAATGCTCCTAGCCCTTATTGCGGCATTTTGGCTGTTAGGGCTTGGGGCTTTAGGTTACGGCTTGAGTGCGCATTTCGTGCACTCCTTTCGTTTTGCAAATTATAAATCACCGTTGGAACACCTTCGTTTATTTGGAGTAGAAATTCCGTGGGGACAAGGATTCAATTCCTAATGGAGATCGTGGGAACAGGCACGTGTCGATGTGATTAGGGGTAGAAAGATGTCCCAACGAAACCCAAAACCACGAAGAGGAAAAACTTATAAAGGGGCAAATAAGGCAACGAAACG # Right flank : GTCATAAACCATTGCTGACCTAGTGCGTTGCTTATCATTATTGCCCGTTAATTTTGATGGGATCATTGATGAATTATGCTCAAAATTTGCCTGCCTTGCGCCTTAATGATCGTGCTTGTTTGAAATGTGTGGTGTTTTACGATGGTTTGTGGTTTATGCTCCTATAGACTATGTCTGTTAGTTCTTTATGTATGGCTATTTTGGCGTTATGTGGGTCTGGGTTATCCCTGTCTATCTGCAGTGCCGTGTTTTCTTTATCAAGGCCTGCGTGGGCTATTACGTTCCTATAATCGGAGCCTTGCATCACATCCCATTGCTCCTCAAGTGGAGGCTTGATCGTCATGTTTCCCTGTATGAAATCCTTTAACTTTGAGTATTTGATCCACTTATTCGTGAGTTGTTTCGCGTAGCCTTTGTCCAGCACCTCCCTGACTGTGCCTATTGCGTTGTTAATCTCCGTATTCACCAACTCCCGGATTCCGCTTATGTACGTGTACTTA # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCAAAAGAATATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //