Array 1 70777-71517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGL010000003.1 Bacteroides eggerthii strain WCA3-601-WT-5E Contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 70777 47 100.0 30 ............................................... TATTTACTCCGAGCTGTACCCAGAAATTCA 70854 47 100.0 29 ............................................... TACAATAGCCGAAAATACACCGTTAAATT 70930 47 100.0 30 ............................................... TAATTGTGATCTGCTCCATATAAGCGAATA 71007 47 100.0 30 ............................................... GGGATCATCAAGACCGCTAAATGTGATATA 71084 47 100.0 30 ............................................... GGTCTTTCACCAGTTTATCCTGAAACAGAA 71161 47 100.0 30 ............................................... GCTACCTGTAATGCTCAAAGAACCCTTATC 71238 47 100.0 30 ............................................... TGCCTCCAACGCAGGATTGATTACTTCTGT 71315 47 100.0 29 ............................................... TGTTATTCATAATGATAATTATTACTGAA 71391 47 100.0 29 ............................................... CGTCGGCCGCTGCAAAGTCTGCAAACGCC 71467 47 83.0 0 .........................A....A.T...AT.C.G....A | ATA,G [71488,71513] ========== ====== ====== ====== =============================================== ============================== ================== 10 47 98.3 30 GTTGTTTCCAATGTTCCAAAGATACTAAAATGGGAGCAAATCACAAC # Left flank : AGCTTCTCTGTATAAATGTTTCAGTGGTGAATTGCGCAAAATTTCTTATCCGGAGATGTAATGGACCGGTTTAGTGAATATCGTATTATGTGGGTGTTGGTGTTGTTTGATTTGCCTACCGAAACAAAGAAGGATAAAAAGGCGTATGCGGACTTTAAAAAAAATCTGCAAAGGGATGGATTTACCATGTTCCAATTCTCTATATATGTTCGTCATTGTGCAAGTAGTGAGAATGCAGAGGTACATATAAAAAGAGTTAAATCTTTCTTGCCGGAGCATGGAAATGTTGGAATAATGTGCATTACGGATAAACAATTTGGAAATATAGAACTTTTCTATGGAAAAAAGACAGTAGATGTAAATACCCCTGGGCAGCAATTAGAACTGTTCTGAAAAGAAAATCCCGCCATATAGCGGGATTTTCTTCTTGGAAACGACGTCTTTTTTTATTTCTAATATTTTATGTAACTATATGTATATTAGATTGTTGTTGATAATCA # Right flank : ATCACGGAAATATGATTGAAAGTTAATGATTTATGGGATTTTGGCGATTTGAGTGAGTGCCAACTGAAACCGGGAAAAAGCCAACTTGAACCGTAATTGCGTTACCAGCTCGTTACCTGAAATCGGAACGGGTAACGGAATGGAAAAGCCCGGCAAAACATGGCAAGAACTGCAATTATACAGGCAGTTGGCAAGGTTCGGGATGAAAAAGTCTTGCGGCAGATTCGATTGCGTTGGTCTGCTGCGGTTTACATACAGGCAAACAGCTCTACACAAGGTAATTTTGCAACCATAAAAAAGTAGGAACTATGAGTAGAGCGACATTCAAGATTTTATTTTACCTCAAGCGCAACGCGCCGAAGAAGAACGGGCTGATACCGGTCATGTGCCGTATCACGGTGAACGGGAAAATCGCACAGTTCAGTTGCAAGCTGGACGTGGAGGAAAAGATGTGGAGCGTGGAAACCGGACGGCTGACCGGAAGGAGCAACGTGGCTCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCCAATGTTCCAAAGATACTAAAATGGGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 94101-94301 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGL010000003.1 Bacteroides eggerthii strain WCA3-601-WT-5E Contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 94101 47 74.5 30 T.GTA.ATATC..GC.....................C.......... ACGTTGGAAACGTTCCCGACTTATGTAGGT 94178 47 93.6 30 ...............C................A...C.......... GTAAACCGTCCTATAAGCTGAACCTGTTCC 94255 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 89.4 30 GTTGTTTCCAATGTTTCAAAGATACTAAAATGGGAGTAAATCACAAC # Left flank : GGCTGATTGGATATAAAATAGTAAATTGTAGGCATTTATGATACGCAAGATACTGACAACTTACGCTGCACGGCTGGATGAATATCTGGCCCGCTCACACCGGCAGCCCGAAGGGGTGGCCGAGGTCGGGCTGATAGGCTCTGCCGGCGAGCAATGCCCCAACAAGCTGGTGGTCTCTCTCGTTAATCTGGAACGGGAAGCCAGCGGCGACGGCGGCAGTATATGAAGGCTGCCTCGGTTCGAGGTCGGCAATTCATTGGAAAAGAGATAATAAGAGAATAAAAAAACAGAAATTCCCATTCCGGGCGGGAGCATCAGTGCCCGGTAACATCATACAGAATCGCAGCCCGCTGCCGTAAGGTCAGTGGGCTGTATTTTCATAAGGAGAAATCATAAAAAAGATGAGGTAAACCGCATGAAACAGAAAACAATAGCAACCAGACACCTGCGCACCAAGATAGCGGCAGGATATGTGCTGATACTATTACTTATTTTCGGCA # Right flank : CTTTTGGAGGAAAATATCCTTCATATCATAGCTATTTTCAATGTTTCAAAGATTTTTCGATGAGTGGTAACGTAATCCAGTGTATGCAATATTGAATGACACTGGATTGTTATGTTTTCGTAATGATTCATTTGTTTTTCGATGAATTCACTGTCACTACTGCTATTTGTTCCATAGAGGCTTACGGATACCTCTTCATACATATAATCGAGATATTGTTGGGCTTGTGCCATATCTGGATATGTGTTCTTAGTTAGAAATTCCGTATTGGAGGCTGACACTTACTGTGTACAAAGGTACACAGTAAGTATATTGATAAGAGTTTTATTCGTTTTTTCATGTTTATTTTATCTGTGTTTACCAATTATCTGTTCTAAATGGAGCTACAGGAATACCATAGGTACTGAATACACTTGCTTTTGCATAATTTTTGTAAGCGTATCGAACTGCTATCGGATGCTGCACTTTATCGCATGATACGGCAAGGCGGGTTGTTTTGG # Questionable array : NO Score: 3.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.47, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCCAATGTTTCAAAGATACTAAAATGGGAGTAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: F [matched GCTGTAAGTTCTTATGCAAAGTTACTAAAATGAAAGCAAATCACAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //