Array 1 60360-60087 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAGVB010000021.1 Nocardia cyriacigeorgica strain CNM20110626 20110626S_21, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     60359	    29	  93.1	    32	............T...............G	GACCGCGTAACGCCGGAGTACACCAGCGCGTC	
     60298	    29	 100.0	    32	.............................	CACTTCATCCTCAAGTCGCTCGCGCTGACCAA	
     60237	    29	  96.6	    32	............................G	TGAGCGTGTGGGCCCGGCCCCGGCGCGCCAGC	
     60176	    29	  93.1	    32	..............C..........G...	TGTAGTCCCTAGCCGTCAGGCGGCGCTGGTCA	
     60115	    29	  82.8	     0	...........ATGC..........G...	|                               	
==========	======	======	======	=============================	================================	==================
         5	    29	  93.1	    32	GTGCTCCCCGCGCAGGCGGGGATGATCCC	                                	       

# Left flank :   GCATGGACCAAGTGGGAAAAATCGGATGCCGCACCAACCCGAACTCCATGCGCAGCGAAGGGCCACCTTGGCAGGTGGAGAAAAAGATGGTCAAGGAAGACCCGTCGCCGGAGCTGGTGGAGCAGGTTCGGGCCAACCTGGATTCCTTGACCGAACGCGGTTTCGTGCTCGAGGACTTCACCATCATCGACGACCATCCGCTCGACCGCGTCTACACCAACGGCGACGGGTACGTCATCCAGAGCAGCATGGAGATCGACCGGCGAGTGACCGACATCCCGATTCTCGAGGTCGCCTCGCGTTCACCGTGCGCCGCGGAATGAGGTGAGCTGTGGGCCGTGCACGCGGCGAGTGCACCACCAAACCGATGTAATCAAGTGATGGCGAGGTCGCGACGTTGCTGTCGCCTTTAGTTGGGCGCGGGCAGATATCGCGTGGTCCGGTCGTCCGAAGTGGTCAAATTCTCGGTTACTCGCTGGTAGAGTGCCTGGTCAGGAAGT
# Right flank :  GGTGGAAGGCCGACTTCGGCGATGCCGACGCCATAGCGCACGTTCACCGCGGTCGGCGCCGTCATGCGCTTCTCCGCACGCGCGGAGGTGAGGAGCGGCTTACTGTTGCCTGCTGCGTCGGTTGGCAGTCCGCGATGGAGTGTTGTCGATCGGTACGAAAGTGCCAGAAAATTGCCTTAGCAACCTGTCGCCGGACGGTGTGCTGGCGCGAGGGCTACAGTTGATGGTCTGGGAGGTTGCGGTGGTCGGATGACGTTCCGGCTGCGGCGTGGAGAGGTGGTGGCATGACTCAGCATCTGGGCGAGGCGAACGTCGAGCAATCGGCTGCCTCGCGGCCCGGCGGTGGGCCGGCCACCTCGTCCGATGGTGCAGCGGGTCAGTCCGCGAAGCCCGCTAACCCAGGGCCCAATCCCGAGGTTGTGCGGCAGAGTGCGGCGGTACCGACGTCGGCGTCGCGGCGGGTGCGGGCGCGGCTGGCGCGGCGGATGACGGGGCAGCGC

# Questionable array : NO	 Score: 3.72
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCAGGCGGGGATGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-11.70,-13.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//