Array 1 97002-97885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHYA010000007.1 Pseudomonas aeruginosa strain Survcare182 NODE_7_length_171007_cov_21.6617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 97002 29 100.0 32 ............................. CGCTGACGACGGTCGCCGAGTGTGACCGCATC 97063 29 100.0 32 ............................. TCCTGGCACGGCGTGCCGCCCACCAGGATCAG 97124 29 100.0 32 ............................. CATGCCCGCCAGATCGGGGAGGGGTTGCTGCC 97185 29 100.0 32 ............................. TTACGCCTGCCGGTGAGTTCTGGCCCATGGAT 97246 29 100.0 32 ............................. CCGGTTCTGCAGGTTCTCGAACTGGTCGCCGG 97307 29 100.0 32 ............................. CTGTAGGTGGTGACATCGTCGTACGGCGCGGA 97368 29 100.0 32 ............................. GGGAAATGGGCTTGAAGGGCGAAGGGAATGGT 97429 29 100.0 32 ............................. GCAGTGACCGCCGCCGGCCTGGACCTGGTCCG 97490 29 96.6 32 ..........T.................. TCGGGTATAGGTGATACCCGACTTTTGTCTCA 97551 29 96.6 32 ..........................T.. CCCCCAGTTTGGGGGCTTTCTTTTTGGCAAAA 97612 29 100.0 33 ............................. TCCGCCGACATCGACCACCCCAACGATGCTGCG 97674 29 100.0 32 ............................. CCGAGATGTGGCGCCGAAACGAGCGCGAGCGC 97735 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 97796 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 97857 28 79.3 0 A..........A..C..-.....A....T | C [97861] ========== ====== ====== ====== ============================= ================================= ================== 15 29 97.5 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 107059-108002 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHYA010000007.1 Pseudomonas aeruginosa strain Survcare182 NODE_7_length_171007_cov_21.6617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107059 29 100.0 32 ............................. CGTCCACAACTGATGCAGGGGCGGTCCCAGTC 107120 29 100.0 32 ............................. AGAAAGCGCCCCGGGTGGGGCGCTGTATCGAG 107181 29 100.0 32 ............................. TACCACCACAGCCGGCCGAACTTCCCAGGCCC 107242 29 100.0 32 ............................. CAGATATATAGAGATTCCTGAGGACACAAGGA 107303 29 96.6 32 ................G............ GTATTGACGTGATGCTCAAATATAAGAAATGA 107364 29 100.0 32 ............................. GGGCGGTACATTGACGTCATGATGAAATCCCG 107425 29 100.0 32 ............................. CACCTCGTCCATACCAACATCCCTATCTACTC 107486 29 100.0 32 ............................. CAAACTGCCCATGTGTGGCGGGGTCGGGTGAA 107547 29 100.0 32 ............................. CACGGCTTCTCCATCAGCTTCCGCATGCCGCG 107608 29 100.0 32 ............................. ATCGGCGCGCTGATGCAGCAGATAGTCGACTT 107669 29 100.0 32 ............................. TAGTAGCGGAACCCGACCGTCTGTGCCTTCGG 107730 29 100.0 32 ............................. ATCGCGGAGAGAAGGGCCTGGTCGAGACGGTA 107791 29 100.0 32 ............................. TCGCCGGTGCGGCCGTGGGGCTACGAGCGGCC 107852 29 100.0 32 ............................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 107913 29 96.6 32 ........T.................... AAGGACCGCGTCCGCGTGCTGCTGGAGACGAT 107974 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.6 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCTAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATGCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 305-752 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHYA010000031.1 Pseudomonas aeruginosa strain Survcare182 NODE_31_length_83111_cov_21.2036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 305 28 100.0 32 ............................ AGTTGCCACCACCACACGCGGTGGAGCAGCTG 365 28 100.0 32 ............................ TCATTGCAGTAGCGTAAATATATCTGGAGGAC 425 28 100.0 32 ............................ ACGGTCTGCCCGCTGGAACTGTTGAACCAGAG 485 28 100.0 32 ............................ AGGACGGGTCGCCTTGGAATCCGGGCGCTCAG 545 28 100.0 32 ............................ TGTCCCAGGCGCAGATACACCTGCCCGTCCAG 605 28 100.0 32 ............................ CGCTTGTGGTCCAGCGACTGGCCCTTCGCCGG 665 28 100.0 32 ............................ TGATCGCGGTAGCGTGGTCCGATCACCTGGGC 725 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : TCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATAACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //