Array 1 2050-24 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCIY010000088.1 Desulfuromonas sp. CSMB_57 NODE_88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2049 32 100.0 34 ................................ GAGAAACCTGGGGCGAGTTGAAATGGGACACCGA 1983 32 100.0 34 ................................ ACCGAAACCCTCGAAAACGGCCTCATCGCCCACG 1917 32 100.0 37 ................................ GCTTACTTTTTCGACGAGGACTGTCCCAATAGAGCAC 1848 32 100.0 35 ................................ CTCATCAACGGCGAATGGCAGCCAATCAAGACAGC 1781 32 100.0 33 ................................ AATGCTGGTCGGGTTCGCGAAGGAACTGCACGA 1716 32 100.0 35 ................................ AAGGGTATGGCATTTCGGTGGTACACCGCTATTGG 1649 32 100.0 35 ................................ TCGAAGAACTGGCGCGGCTCACCCCGCCGCAGACC 1582 32 100.0 33 ................................ GTCGAGGTGGCACTGCCCGGCGAACAGCAACAG 1517 32 100.0 36 ................................ AGCTGGGGAGCCAGTATCGTCGGCAAGACCGTCGAA 1449 32 100.0 36 ................................ CCTCCGCTGTGTGTGCCTGCGCACGGTGCGCGTTGG 1381 32 100.0 33 ................................ AACGGACTCAACATCTCCCAACTCGGCGGCACC 1316 32 100.0 34 ................................ TCATTTTTCCAGGCCCTGGACCTGACGTCGAGCA 1250 32 100.0 35 ................................ GCCGCGAGCTGGAGGCCATGGGCTACGAACTGCGG 1183 32 100.0 34 ................................ AGGTCCCGCACCCATCCATCCTCGGTAATCAGGT 1117 32 100.0 35 ................................ ACCATCCGCTTCGGTGGCGGCGGGTCGGAGATTTC 1050 32 100.0 35 ................................ TCAGTTGGAGGTGATTGTCGCCGATATGGATTTGG 983 32 100.0 35 ................................ ATTGTCAGCCCCGTTACAGTGCAGGCTGATAAAGC 916 32 100.0 33 ................................ GCCGGGCCATTGTCGGGCCGTCGCGGAGTTGGA 851 32 100.0 33 ................................ CCATCGACATCACGGCAGCGGTGCGTGCGGTGG 786 32 100.0 34 ................................ CTGGGAATGGCCGGGCATGGGCGCGGAAGCGCCG 720 32 100.0 34 ................................ TCGTTTCTGCCACCGAAGATAACAACTGGGCCAA 654 32 100.0 34 ................................ CCATGCGCCCCGATACGGTCATCCGCTGGCTCGC 588 32 100.0 34 ................................ TACACCGCCGATTTGCGGGTGCTCGACTGCCTGC 522 32 100.0 37 ................................ ACCGTGGCCTTGGGCAAAGCCTACAGCATGGGCTTCA 453 32 100.0 33 ................................ CTCCCACAATTAAACCCGTTGTTGTTGAATCTA 388 32 100.0 35 ................................ ATCATTCCCTCCCTTAGTCATCGGCACCATTGCCT 321 32 100.0 33 ................................ GTCTCGGATTACTTTTACATGCTTTTTCATCAT 256 32 100.0 35 ................................ TAGGCTATTTGATCATGTGAGACATAGAGCGGTTA 189 32 100.0 35 ................................ TAGGCTATTTGATCATGTGAGACATAGAGCGGTTA 122 32 100.0 35 ................................ TAGGCTATTTGATCATGTGAGACATAGAGCGGTTA 55 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 100.0 34 GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Left flank : GATGAATATCCTCCATTTATCTGGAGGTGAAGAGATGATGGTTCTGGTAAGTTACGATGTGGCGACATCCGACCCGGCCGGCCCCAAGCGCCTGCGCAGGGTCGCAAAAATCTGCACCAACCATGGCCAACGTGTGCAGTTTTCCGTCTTCGAGTGCATTGTCGATCCGGCGCAGTGGGTTGCAATGCGGCAGCAGTTGATAAAGGCCATTGATGAGACGCAGGACAGCCTGCGGTTTTATTTTCTCGGTGCCAATTGGCGGAAGAGGGTTGAGCACGTCGGCGCAAAAGAAACCATTGACCAAGAGGGGCCGCTGATACTTTAGCGAACCCCAAGCGGTTCAGGAAAAACGGGCAGGTTCGCGGGCTTTTCAAGTGATTGTTCTTATACGATAAAAAAGGTTTGGATGTTGCGTAGGGAGCAATTGGCTATCATTCTTTTCTCGGGTTCGCGGAGTAAGAGGAAATATTCTTTTTGAAGTAATGGTTTACAGTAGTGCT # Right flank : CTAGGCTATTTGATCATGTGAGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 76224-75190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCIY010000012.1 Desulfuromonas sp. CSMB_57 NODE_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 76223 32 100.0 34 ................................ GTCCGATCAAGAGCGTCGCCGTAGTGGTAAAAAC 76157 32 100.0 36 ................................ TCTCCCAATCGCTCCACGCACTCCATGCCGCCCCGG 76089 32 100.0 35 ................................ ACCGTCCCGGTTGATGGCTGGCAACTCAACCACCG 76022 32 100.0 34 ................................ AATCTGGAAGGGCAGGGCGCGGCACATACCCCGC 75956 32 100.0 34 ................................ CCGGCCAGTCGGCGCAGGTGGTGCTTGAAGCGTG 75890 32 100.0 36 ................................ GACACCCCGGCTCCAAAACGGCCGGAGGCGTCACCC 75822 32 100.0 35 ................................ CTTGCGGGCGGCCAACTCCTCGCGGTCGGCCTTGG 75755 32 100.0 35 ................................ AACTTCACCACGGCGGCTTCCAGGGCGGCGTTGAT 75688 32 100.0 35 ................................ ATCCTGTCGTTGGTCTGCGCCCTGGTGGACGGGCT 75621 32 100.0 34 ................................ GTCCAGCACCGCATCCACCCGGGTGACGTAGCTC 75555 32 100.0 34 ................................ GTCGGCGCCCACGATCTCAACAACCTCAAGCTCC 75489 32 100.0 36 ................................ GCGCCGCCCTGAACCGCCTGCTGCAGGCTACGGGTC 75421 32 100.0 35 ................................ TGCCACAACGGCGACTTGGTCCTGCCGGAGTCCGT 75354 32 100.0 35 ................................ TTGGCGATCTGCTCCAGGGTCGGCAGCAGGCCGTC 75287 32 100.0 34 ................................ CAGAAATTTCGCCGTGTCGCCCACACTTTCGGCC 75221 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 16 32 100.0 35 GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Left flank : CTGGGTGGTGATGCCCAGCCGCTCTTTGGCCTCGCGCACGTATTTGCGCACGTTCGATTCACTGCCGGTGTAACCGCACTCGGTTACCAACCGGTCAAAAACGCGCCGGGCGGTATGGCGCTGCTTGCGGGGTCGACCCCGATCATCCCGCAGCCAGCCGTCAATGATTTCCAGGAACGGGCCGAGTATTGGAAAGGGCTGCTGCTGGCGTGGTGAGTAGCCGTTGTAGGGCTCGCTAAGCGCCTTACGTATGGTGTTGCGCGAGTGCCCGGTAACGCGGGCGATTTCGCTGATGTTCTGACCGTAGACCCGATGGGCCGTGCGAATGTGTTCGTATTGATCCATCCTGAGCATCCTCTCTCCTTCGATTACCATGGTAGAGCACCATAGTACCGAAGGGATGCCGGGGGTGGTCAATTTTGGGTAATCACAAGGCCTCTAAACTGGTCAAATTTAGATTATCAAAACCAGCCGTTGGTGAACTCGTCGTTGCTCACCCC # Right flank : GATAAACACTAGAACAAGCATGCCCAACCATTCCCACGGGAGAATACAGATCAGGGCGGACCCATGTGTCCGCCCTGATCTGTATCATGCCCGCCAAAATTATTGGCGTTCAATTCAAAGTCAGGGCGGACACGCGGGTCCGCCCCTACGGGGTATTATAACCACCAACACCTACATCCGTGCCGTCTAACACCACGCTTGGCCACCATTCGCCGGACGACTGTGGCAGCGCAATGATGACGAACGCATTATCCGCAACGCCGATGAATTGCACCGTGCCCGCAGATACATTGAAACCAATCCGCCCTGACCCACGTGTCCGCCCTGACCCAGGTGTCCGCCCTGACCATCTACCCATTTCCTTTTCTCTGTATTTGTTGTAATTTGCGCGACGAATAACGCAAGTTTGGGGACCGGAAATCAACCACGGCACCGCCGGATCACGCAAAGCGAGGAAAAACAATGGCCATCGATATGGCTCTGGTAAACACCCTGGAACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 54585-58638 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCIY010000017.1 Desulfuromonas sp. CSMB_57 NODE_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 54585 28 100.0 33 ............................ CTCGATCAGTTCCGGTTCGATGCTGCGGAGCGG 54646 28 100.0 33 ............................ TTCTGGCACTCATACCGCTTCAGGCCCGCCTCG 54707 28 100.0 33 ............................ TGTAACGGAATTGTAACGCTGCACGGCGGCTAT 54768 28 100.0 33 ............................ CGGCCTGACTTTCAGAACACGATAAAGGACGCT 54829 28 100.0 33 ............................ CTCGCGGCTGACTGCACTCGCATTGACAAAAGT 54890 28 100.0 33 ............................ CCTGCCCTATTTCCGCCGACCCTGTGACCGATT 54951 28 100.0 33 ............................ TCACAATCAACCACGCTTCCGCCGTCGCCTGTA 55012 28 100.0 33 ............................ CTTGTATTGTTATGCCTTGCCGATACAGCCAAC 55073 28 100.0 33 ............................ GTAGAGGCTTTTCCCGCAATGTGGGCAATGCAC 55134 28 100.0 33 ............................ TTGCGCCAAAGCCCGACTATCAAAAATGGTCGG 55195 28 100.0 33 ............................ CCCTCCTCCGTTTCCATCAGAGGGGTCAGGGTA 55256 28 100.0 33 ............................ CCCGGTCGGAGGCAAATGAGCCAATCGCGTCCA 55317 28 100.0 33 ............................ CTCTATAACCCCGATGGCTCCGGTTATAAACGA 55378 28 100.0 33 ............................ TCTGCTTGACGGTGCCAGCGGTCTTGTTGATGA 55439 28 100.0 33 ............................ CCTATCCGGCCAAAGGATAGATGCACAGTCTGT 55500 28 100.0 33 ............................ TGACGTGCTGAACAAGGAGCGGCTGGAGTGCAA 55561 28 100.0 33 ............................ CCCCTGCCCCGGATGGAAAAATGCAGATGGACG 55622 28 100.0 33 ............................ CCATGAAATGGCGAAACATTGAAACAGCACCTA 55683 28 100.0 33 ............................ TTGCAGAGCGGCAAAAGAAGAGCGCCCGGCGAG 55744 28 100.0 33 ............................ CTATCCGCAAGCCCGGCTCGGAGATCTGGGTCA 55805 28 100.0 33 ............................ CCAAGGAGGCGAAGAAATGACCGATGTTGAATC 55866 28 100.0 33 ............................ GCCAACACAGCCAACGCACCGATAGCATCAACG 55927 28 100.0 33 ............................ CGTTGCTGAGTGCCGACTGAATCATTTTTTCTG 55988 28 100.0 33 ............................ GTTGACTGCGCTCGGTGTCCCGACCCGCCCCGC 56049 28 100.0 33 ............................ TCCACCTGTTGACTGACGGCGTGCAGCAAGGGC 56110 28 100.0 33 ............................ TCCACTACACTTTGCACAATATAGAGCGATTGA 56171 28 100.0 33 ............................ TATGACAGCTAGAGCGAGTCCAGAGTTAATAGG 56232 28 100.0 33 ............................ TTATCGTATAAAAGGAATATGATGGTATAGGCT 56293 28 100.0 33 ............................ CTGCCGGATGCTGATGAGGCTGATCGCTGTTTG 56354 28 100.0 33 ............................ CCCTCTTCCTTCCCGTCCAGCGTCCACTGGCAT 56415 28 100.0 33 ............................ TCAATCTGCTATCCGATTCGCCAAGTGGATCAG 56476 28 100.0 33 ............................ CGAGGCACCATGACATGCAACCAACCGACCATC 56537 28 100.0 33 ............................ CTGATTAAGTACCCGTTGCCCCCATTCGGTATG 56598 28 100.0 33 ............................ TGTGCCATGGTCGTTGCCGGAGGGCGGCTCAAG 56659 28 100.0 33 ............................ CATCCCCCTTGCTAGTCAAATTTTCCTCAAGAA 56720 28 100.0 33 ............................ TTACAGAAACTTTAAAGGAGATCACGTTATGTC 56781 28 100.0 33 ............................ CTTTGATGAACAAAAACCCGTCGCAGAAACTAT 56842 28 100.0 33 ............................ CCAGATGCTTGTATTGTCGGCCCATCCCAAGTC 56903 28 100.0 33 ............................ CGGGGCACGCGTGTTGGCAGCGGCCCCGTTCTT 56964 28 100.0 33 ............................ TTTGCTTTTTCATGGTTTAATTCCTTTCCTTGA 57025 28 100.0 33 ............................ CGTTCTGCCTTGCTCCCGAAACGTCTGAGTTAT 57086 28 100.0 33 ............................ TGAACGTCCAATTACTCCACCACGCCCCTTTGT 57147 28 100.0 33 ............................ TTATGGCATGGGTGCGGCGGCCAATGTGGGCAA 57208 28 100.0 33 ............................ CCAATGCCCATAAACGGGCTGAACACAAGATCG 57269 28 100.0 33 ............................ CTGATCGAGTTTTCCGACGACCCGGAGGATCTG 57330 28 100.0 33 ............................ CGTTCGGCCCGGTCGGGATCGGCTGGACGTACA 57391 28 100.0 33 ............................ CGGTTCAGGGTTTGGTTGCCATGCGCACTCTTC 57452 28 100.0 33 ............................ CGAAAATGCCCCTGGATAAATCGGACAGCACTC 57513 28 100.0 33 ............................ TCACATGGGGCGGCGATTGGCCGAAGTTCCGCG 57574 28 100.0 33 ............................ CCAGCGGCCCCAGATACGCCTCATCGTACACGC 57635 28 100.0 33 ............................ TCTTGATCAGGGCGTCCAGAACCTTGCGGGCGG 57696 28 100.0 33 ............................ TGAGAAACAGTTTGCGGCTGGCCCAGTCATTGA 57757 28 100.0 33 ............................ CTACCAGATGCCCGACGGCTCGGTGATGGTGTT 57818 28 100.0 33 ............................ CCGACTACACCTACCAATATATCCGCGATCAGC 57879 28 100.0 33 ............................ CGTGCCAGGATGGTGGGGATGTAAAAACTATTG 57940 28 100.0 33 ............................ CTTGATGGTATCGGGCCGCTTCGGGCGCATCCA 58001 28 100.0 33 ............................ TCCGGCAATAACCCAATACACCAATAGGCAATC 58062 28 100.0 33 ............................ CCAGGCGTTGTCGATGCGGCGGGCGTCAACAAC 58123 28 100.0 33 ............................ TTTAACCGGCGTCACGAGCTTTGGCGGGATGGT 58184 28 100.0 33 ............................ CTGCCCGATGCGGATGATTTTGATCGGGCATTG 58245 28 100.0 33 ............................ CTCCCGGCTGTGGTCATTGCCGCAGCCGAAGGG 58306 28 100.0 33 ............................ TTACATTGCGAATGATTGCTTAATATCTGATTG 58367 28 100.0 33 ............................ TTTCGTCTGGTCGGGAACTCCCCGGGTGTACTG 58428 28 100.0 33 ............................ TGTTTTTGTAATTGTACTTTTCATTGCCCGATA 58489 28 100.0 33 ............................ CCAAAAAACAGGCGGATCACATTGTGCGTAAAG 58550 28 100.0 33 ............................ TTGGCTATCTGGACGGATGTATTGTCCCGATAC 58611 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 67 28 100.0 33 GGCTCCCCCGCACACGCGGGGATCGACC # Left flank : ACGGGTGATGGACGAACCACAGCGACCGCTTGAGAGAGAACTGCGCCTGGAGGCAGCTCGGTGGTTTCGCAAACACAAGCTGATTCCGGCCATGATTGACCGGATCAAGGAGTTGCTGCATGTCGATGACGGTGGTGGTGACCCGTGACGTCGCGGCCCGTATACGTGGATTTCTTGCCTCGACTATGCTGGAACTGGCCCCTGGCGTCTATAGCGCGCCTAGGTTGTCGCCGGCGGTCCGTGACCGGATATGGGCCGTGTTGAACGAATGGTTCATTGCAGATGAAGGCGGATCCCTAGTGATGCTATGGGAGGACAAATCGCTACCCGGCGGTCAGTCCGTCAAAACACTGGGTTTACCGCCGATTGACCTCGTGGAACTGGATGGGATTGTATTGAGCCGGAAGCGCTGACGATAGATGAACGTAATCTTATACAAAACGCATCGATAGTGCCTAAAAAAGAGAAACCTTATATATTTCAAAGGGTAAACCCCTAGA # Right flank : CTCAACCTGCCTTTTGGACCTTCTGTTCCTGACGGGCTCCCCCGCACACCTCAACGAGGGTAATGGAAAACTTACCAGTTTCGGTAGTCGAAAAGTGTACCACCGCCAGGCGTGAGGTAGAATTGCACTGGCGGATTCCAGTCCAAAGACTCGTTGCATGCGGAAATTCCACTCTCCACGGAGCCCAACCATGCCCTCCAAAGAACCCTACGAAGAATACGCGAGAGCCCTCGAAGCCAGCGGCGACTACCGGGTCCTGCGCCGCCTTAACCGGGTCGACCGCTACCACCCGGACCCCGAGGAAACTAAGCTCATCGGCGTGTTTGCCGACATCGAAACCACCGGCCTGGACCCCGGCACCGATAAAATCATCGAGCTGGCCATGGTGCGCTTCGAGTTCCTGCCGGACGGCCGCATCTTCCGCATCCTCGACGAGTTCGACGCCTTCTCGGATCCAGGCTTTCCCCTGCCTGAAGGCATAGTGCGCCTGACGGGTATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA //