Array 1 4456-5402 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENJ01000058.1 Corynebacterium bovis DSM 20582 = CIP 54.80 strain DSM 20582 contig00058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================= ================== 4456 29 100.0 32 ............................. GGCTGGCACGGGTAACCACCGGTGAGAATGTC 4517 29 100.0 33 ............................. GCATGGTCACCCCCCCGTGAGCTCCGAGCCGCC 4579 29 100.0 32 ............................. ACAGCCCCGCTCGAGTCATGGCGGACGTACGC 4640 29 96.6 32 ............................G CGGCTGTGCATGACGTCAATCGCTGCGTTCAT 4701 29 100.0 32 ............................. ATCTGGGACGTCGCCGCCCGCAGATCATTCGT 4762 29 93.1 32 .............CG.............. ATGGTCGGCCAGGTGTGCGGTCTTCTGCATAG 4823 29 93.1 32 ............C...............T GCTTCGTTGAGTGTCGGTCCGGCAGGTGCCTG 4884 29 100.0 32 ............................. GTGGGCGTCCGGTCGGCACTGTCGACGACGGG 4945 29 96.6 32 ............................G CAATGGCAGCGGGTAGTGAAGTCGGGGGTTGA 5006 29 96.6 32 ......................G...... GCGTCCGAGTGGGCGCGCCTCGACTCGGATTT 5067 29 93.1 32 ............C...............G CGTTGGTGGTGTCCTTCCTTGAGGGTGTTGTG 5128 29 89.7 46 ...............A.........G..G CGGGGATGATCCGCAGGTCATCGGCGCGCTGGTCGGTGGTGTCAAC 5203 29 82.8 81 ............C.........C..C.TG CGGGGAGCACCCGCGGGGATGACCCCGGGCCGCGCCGCTCCTGGCTGGTAGGGAGGACGACCCGCTAGACTGCAGACACTG 5313 29 93.1 32 ............C...............G CGTCACGCTTGGACGACTTTGATCCGGCATGT 5374 28 93.1 0 ...........-................T | C [5389] ========== ====== ====== ====== ============================= ================================================================================= ================== 15 29 95.2 37 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : GCACCGGAAGACGGGGTTGACCAGGTTCCCGGCGGCCCTTCGCGACGGGAGGCTCCGTGATCACCGTGGTGTTGACGTCTCCTCCGGAGCGGGTGCGTGGTCACCTCACGCGATGGCTCTCGGAAGTGGCGACCGGAGTGTATGTCGGCAAGGTGAGTGCCAGAGTGCGGGACGAGCTGTGGCAGATGATCCAGGTGAACATGGACGGCGGTCGGGCGGTGATGACGTACCCGACCACCATCTGCGAGCAGGGGTACGCCGTGAAGGTTCACAAACCGCAGTGGGAACCGGTTGATGTCGAGGGCCTGGTCCTGTTTCGTCGGCCGGGCCGTGACCGGACGTCGCGGACCCGCGGCGATTGGTCACGGGCCTCGCGGGAGCGCGACGGCAGGACCAGACGAGCGGATGATCTGCAGTGATGGTTGGTGCTGACGTGAGGGCGCTGATCGACATTGAATGAAATCTGGCTTCTCGTGTACTAACATCCCTGGTCAGGAAGT # Right flank : TCACCACCACCGCCCACCCACCTCCCGTCGTGTTCGCCCGTCCGCCGACCGCAGGTCTAAGGTGAATCCGTGGCCACGCGAACGACGACGAACAATGCCGCGCCCGGGTCAACCCGGCGCCGGCGGGGCTGGCGAGCGTTCCTCACGCCGGGCTGGGTCATCACCGCCGTCATCGTGGTGATGTTCGCCTACGTGGCGTTCACCGTCCTCGCGCCGTGGCAGCTGGGGAAGAACACCCGCACGCAGGAGAACAACCAGCGCCTGTCCGCCGCGATGGACGCCGACCCGGTGCCGGTCGAGGACGTCCTCCCCGCGGACGGCTCACCCGCCGGCGCGGACCGCGAGTGGACCCGCGTGACCCTCCAGGGCCGCTTCATCCCGGACGCCCAGGTGCTCCTGCGCAACCGCCCGGTGGACACGAGCCCCGCGTTCCAGGTCCTCACCGCGTTCCGCCTGGATTCGGGCGGCACGGTCCTCGTCAACCGGGGCTGGACGCCGCC # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.24, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : GTGCTCCCCGCGCGAGCGGGGATGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //