Array 1 36381-37254 **** Predicted by CRISPRDetect 2.4 *** >NZ_CTFB01000047.1 Pseudomonas aeruginosa isolate 15.311Ba, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36381 28 100.0 32 ............................ ACCACCCGCTACCACCGGCAGCCGCACCGGCC 36441 28 100.0 32 ............................ ATCACCGGCGCGCTGGCCTTCGGCGCCCAGGC 36501 28 100.0 32 ............................ TTATCAGTAAATACGTGGCGACTTGGCCACCC 36561 28 100.0 32 ............................ TTGCTGCGTGTTGCAGCGACACCCGTTCAACA 36621 28 100.0 32 ............................ ACTGGAGATACGTGCACAGATCGGACGACACG 36681 28 100.0 32 ............................ ATATCAGTTTGCATGGTTTGCTCCTACCAAGC 36741 28 100.0 32 ............................ TTGCATCGCACCCTCCTGCTCACCGACCAGGC 36801 28 100.0 32 ............................ TGAACGTTCACGCATCACGCGCCTTTCCGGCC 36861 28 100.0 32 ............................ AGGCAGACGAGTACGCGCGGTCTCGCGAAGTG 36921 28 100.0 32 ............................ AGAACATGGCCCGGCTCCCGACGTTGCTGCGG 36981 28 100.0 32 ............................ ATGACGCAAGACGAGCTTGTCCGCCTTCTGGC 37041 28 100.0 32 ............................ GTTTGCAGGAAGCGGCGCTATCGCACCGAACT 37101 28 100.0 32 ............................ ATAGCTACGCCGAGCCAGTTGTAAGCTGACGC 37161 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA ATAGGC [37173] 37227 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 98.1 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAACACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGGTCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGGGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 47067-45778 **** Predicted by CRISPRDetect 2.4 *** >NZ_CTFB01000047.1 Pseudomonas aeruginosa isolate 15.311Ba, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 47066 28 100.0 32 ............................ ATCAGCCGGACGTTGTAGTAGTCGAGCGCGGT 47006 28 100.0 33 ............................ GCCGGGTGGTGACTTCTGGACGGCGTTCGTCAA 46945 28 100.0 32 ............................ GACCTGGTTTTGGCCGACACAGTGGCTGCGAC 46885 28 100.0 32 ............................ CGGTCCTGCCAGTACTGCGGCAGGATCTGGTC 46825 28 100.0 32 ............................ AGCCTGGCGCCCTTCGAGTCCATCCAGCCCGG 46765 28 100.0 32 ............................ CATCCAATTCGCCGATCCGGCGCAAGCGCCCG 46705 28 100.0 32 ............................ ACGAAGCAGATCGCCGAATGCGGCGTCAGCGC 46645 28 100.0 32 ............................ GTGGGTGCAAATCGCGATTCTGGTCGCGTCGT 46585 28 100.0 32 ............................ TGAATATCAGCCTGCAAAGCGTCGTCGTAGTA 46525 28 100.0 32 ............................ AAGCCGGGCCGATGTTCGAGCCTGGCTGCGTG 46465 28 100.0 32 ............................ TGGACAATGCGCAGCCCAGGCGCTGGATTTAC 46405 28 100.0 32 ............................ ATGCGAGGCTGATCGAGGTGCGCGGTTCTGTT 46345 28 100.0 32 ............................ GTGCGCGGATGGCTGGTATCTCGAGCACGATT 46285 28 100.0 32 ............................ AGGCAAACAACGGAAAGATCACCACCGAAGGC 46225 28 100.0 32 ............................ AACGAAACAGGCCCAGCACAGCCGCTTGATAA 46165 28 100.0 32 ............................ ACAAGACGCTCATCGACGGCAGCATCGAGACG 46105 28 100.0 32 ............................ AAGGTGACGATGCACAGCTGTTGCGCGCGGTT 46045 28 100.0 32 ............................ ATCCTCGAACAGCCCGGGTTCGGTCGCCTCCA 45985 28 100.0 32 ............................ AGGAGTTTGCGGCCCCGCTCCCTGCGGCTCTC 45925 28 100.0 32 ............................ TTCACGGCGGGCTTGATGTCCGCGTCTACCTG 45865 28 100.0 32 ............................ TTGCCGAGTACGATGCCTGATACATGAATCCA 45805 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCAAAAGACCTTTCGCGCCCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCTCGCTTGGAAGCTCACGCTCCTCACACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //