Array 1 415808-417361 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082111.1 Pediococcus acidilactici strain ZY271 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 415808 36 100.0 30 .................................... CTGTTCTTCCTTCACGCTTTCACGGAGTTT 415874 36 100.0 30 .................................... TATACCGGGCTTATCGAGCCATACAAGGCA 415940 36 100.0 30 .................................... TGAAGACATGCGTAGCACTTCAAACGTTGA 416006 36 100.0 30 .................................... AGGAAAATGGTCTGTAACATCAGTGTCTAC 416072 36 100.0 30 .................................... TACAGTATTAACTGCAACAGTACCAGTTAC 416138 36 100.0 30 .................................... AATCTTAGTTGATAGGTGAACAATTACCAT 416204 36 100.0 30 .................................... AAGCCAACCGGTTATAACATCAAAGATGTT 416270 36 100.0 30 .................................... CAAAGTACAAGGTGATTCAATGGTCGGAGA 416336 36 100.0 30 .................................... TTGGGATCATGTAAATTGTTGTGATAATCC 416402 36 100.0 30 .................................... GATGACGATACGGGTTGGATGGACATTTCA 416468 36 100.0 30 .................................... AGACGTTTTGCCGCTGGATTGATTGGGCTA 416534 36 100.0 30 .................................... TCGGAATCTAAAAGGAGTGACCATATATGA 416600 36 100.0 30 .................................... ACAACATCTAAGATAAATGACGATATCTTA 416666 36 100.0 30 .................................... CAAAAGCATTCTTAATAGACACATATTGAT 416732 36 100.0 30 .................................... AAGGATAGTAATAAGATGAGTCCTCAGGTT 416798 36 100.0 30 .................................... CACGTAACCTATGCCTTACATCAAAAGGGT 416864 36 100.0 30 .................................... GGTGAATAGTAATGAAGTTAGCAAAGATTA 416930 36 100.0 30 .................................... ATGGCGACGTGGGGAATATTACTTGCACTA 416996 36 100.0 30 .................................... TAAAAATGTGAAAGTAGAAATAGGTAATAA 417062 36 100.0 30 .................................... GAAGCCTAAAGAGATTGTGCAGTCACTTTC 417128 36 100.0 30 .................................... CGTATCCAGACAAGAATGTATACGAATCAG 417194 36 100.0 30 .................................... AAGATTATGAAAAGTGGTTTAAAACTGCCA 417260 36 100.0 30 .................................... ACTTTAGTGCCCATAATTTCACTTTTGTTT 417326 36 97.2 0 ...............................G.... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.9 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGAGTTTTTGCTGAAGGGCTGGTGGAAGAGCAGCGTAACCAAATTCACGATCAAGTTAACCAGCTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGATAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTAACGGCAACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGATAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CATAATGGCGAAGAGAACTGTATAGTGATACGAAGATAAAATCGAAAAGTTGAAGATGCAGAAGGATGTCGGATTAAAGGGCTTAAGTACGAGTACCATCGAGAAAGTATATCAAAGGTGTGCAATGATGGAATTGTTAAATTAGTAAAAACAATGTACATTAATAGCTCTAGAAAGAATAGCGAAACGCTTCTATAGAAAAGCAAGCTATTATAATTTTCAAACTTGAAACTGGAAAAATCATAATAGTGTTCAAAATTAACAAGTATGTAAGGAACGATAATGAAAGTTAAAGACGTTTATTCTGAAGCTGAATTAGAAGCTTTATTAAAGTTCATTCCAGATATTGATATTGGCAGTGAGTATACTGATGATGATTGGTGTATATTAGACGACAAGCTACATGACATTCTAGTTTTAAAGGGCCGTACATCTAACGACGAACTGAACGACATTGGGTTAGTTAGTTGAAAAATTAATAGATTTCATTCCCTAATTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //