Array 1 75370-73814 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEQ01000010.1 Limosilactobacillus mucosae DSM 13345 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 75369 29 100.0 32 ............................. ACAAGGAGATCACTGGCAAGGACTATGTGGAC 75308 29 100.0 32 ............................. GGAGTACGTCTTCTTACCATCTTGCGTATCAT 75247 29 100.0 32 ............................. GTTACCACCCGCAATGGACTTGCCTGGCGCAA 75186 29 100.0 32 ............................. CCCATTGCCAACAATGAGAAACCATCGCGATT 75125 29 100.0 32 ............................. CAGTTGCTATGGTTATGACTCAGACTGCCGGT 75064 29 100.0 32 ............................. CAGCTTGATGTTCTTCGATACGACGAAGTCTG 75003 29 100.0 32 ............................. GATGTTTGTACCATGTCGACAGCCTTAGCGTA 74942 29 100.0 33 ............................. GTCGTAAAGGCGGACCTGGCAAGCGTTAAATAA 74880 29 100.0 32 ............................. ACTAAACCACCTATTAAGAATACTAAAGGGGG 74819 29 100.0 32 ............................. ATTGTGTTCTTTTGGGTTGGCTTGATCGTCTT 74758 29 100.0 32 ............................. TAGCATACACAAAACCGCCAAAATACGCTTGC 74697 29 100.0 32 ............................. TAATTTCGTTGAATTGTAGATCTTGACGCCGT 74636 29 100.0 32 ............................. CGATAAGCAGTCATACACGGACACGATCGACG 74575 29 89.7 32 ..........................TTG ATAAGGCGATGATTAGGTGTCCAATTAAAGCG 74514 29 100.0 32 ............................. TGGCTAAGTCGCTGGGCAAAAAGCTCGGCTAC 74453 29 89.7 32 ..........................GTC AGCAAAGAAGTCCAAAAGCAACTGGATAAAAC 74392 29 100.0 32 ............................. GCACCTGTTGGCACGGTTAGATTTCTGATATA 74331 29 100.0 32 ............................. GGCAACGCAAGGCGACGACCGCCTTTTGAATA 74270 29 100.0 32 ............................. GAACGAATCGATCGTATTGAAAAGATGATCCC 74209 29 100.0 32 ............................. ATGTATTCTATTTTCAAGATGTACTACCCAGT 74148 29 100.0 32 ............................. TCATCATTTTGCACTTCAAGTTGACAACACGT 74087 29 100.0 32 ............................. CAAGTAGCGTTTGGCTAGGTCTAACTGTGCGT 74026 29 100.0 32 ............................. TGATATATCAATCCCGTTTAACAGTTCATTTT 73965 29 100.0 33 ............................. TCTCTTCGCTTGCCGGATCGCACCCCGCCGCTA 73903 29 96.6 32 ............................C TGCAATTGTGGATGCGCTAGGCCGTGCACCCC 73842 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 26 29 98.9 32 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : ACAAACAGTGAGATTATTTCAATCAGTGCAGTAAAAAGAATCGATGAACAACAAGTAGAGAAATTTAATCGATATATTAAAATAGAATCAGAAGTTCCAACTAACATTCAAAAATTAACGGGCCTATCCAATCAGTTGTTAGACTCAGAGGGTGAGTCCCTAGAAAAAGCGTTAGATGAATTTCAGACCTTTATTGGTGACTATGCTATAGTTGGTTACAATTTGATTTTTGATCAAAGCTTTCTTAATGCTGCATTTATAAAAGCTAATAAGCAAATTCTTTCAAATCGTATGATTGATTTAATGCCAATTATAAAGAAGGATCAAAAATTTTTAGATAATTATCGGTTGGCGACAGTTCTTAAAAAGTATGAAATTAAGAATGACCATCCGCATAAATCTATATCTGATGCAATGGCTACTTTGAACCTAGCGCTTAAACTAATCAAAAATGACAAACTAAGGATCTAAAAAAGGCGTCATATAGGGATCTATTTACT # Right flank : TAAACTTTAATTCTTATCATTAGCCCATTTATATAATGAATCCAAAAATTTCTTTCGTTTTTTTTCTTCAGATTTAGAAATTTTTTGTTTCTCAATCGAAGATAAATTATTTTTCAGTTGATCTAATGTAGGGTGATCAGTCCATCTGCTATCGGTAAATTGTTTTTTACTGCTCATCTTGTATCACCTTGATATATGGAATTAATTCTATTTTTAAGCATACCATATCCTATTACTTTAAAAGCAGTGCCTCTTTCAAACAGAACTTCTTTTTCTGCTGAGTTAATGTTAATTACATCTAAATCGCGTCCCTTACTGCTTTTAACAATAATTATTCTCAAATCTTTGTTATCAGGATCATGAAGTATTCCCCATGTATGTGGGGGTGATCCTTCCGTTTACGTGATACAGACAGACCAATTTTCGTATTCCCCATGTATGTAGAGGCAGTCTGCTCAACTGAAACTGATTGATAACTAAAATAGCGCTATATCAAGCTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.40,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2583-1158 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZEQ01000030.1 Limosilactobacillus mucosae DSM 13345 Scaffold30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================= ================== 2582 34 100.0 34 .................................. CAAAACTGAGCCCTCGATTCCAGCCGAGTCCAGA 2514 34 100.0 37 .................................. AAAGGAGCATAAAACAATGAACAAGAAGATCATCAAA 2443 34 100.0 36 .................................. GCTAACCGTGCGATTAACTCGTTGATCAAGCACGAT 2373 34 100.0 39 .................................. CGTAATTGCCAGCGCTGACTTTATCATCCGGATCGTGCT 2300 34 100.0 36 .................................. AAAACTCGTTCGTTTGCCAAACTGGCCTCGTTTACG 2230 34 100.0 36 .................................. TCGAGGGCAGCTATTATGCTTTGGACGCCGACAACA 2160 34 100.0 34 .................................. TCAGTTACGAGAGTACCGCTTTTTTCTTTTGTAT 2092 34 100.0 36 .................................. AGCTGTTCAACGTCTGGCTGGCCCAGAAATGGAACT 2022 34 100.0 34 .................................. AGTCCTCCTACCATAATATTTTCAGGTACCGATC 1954 34 100.0 38 .................................. AGCCTTGGGACGAATTCTGCACCGTTCGCACGGCAATC 1882 34 100.0 35 .................................. TTCCGGTTTTTCTTCTTTTTGCGGTTCTTCCGTTG 1813 34 100.0 35 .................................. ATGTTATGGATACGGTCTATGGTCGGATCTATCGT 1744 34 100.0 34 .................................. ACCTAACCAGCGATGAATATCGCTTAACAGTGCG 1676 34 100.0 34 .................................. AAACATGTAGTTGTCCTTGTACCATTTCCAATTG 1608 34 100.0 34 .................................. AAAAGGCAAAGGCGGTAATCGCCGAAAAGAAGTA 1540 34 100.0 37 .................................. TGGCAGCTAATTGTGTGTGCATTTTAGCACCTCCTTG 1469 34 100.0 36 .................................. AGACTGAATCTGGCGGTAACCCGCATGCTAAACAGC 1399 34 100.0 37 .................................. ATAAATCATCGTGTTGTTATCCAGTGCCAAACAGATG 1328 34 100.0 35 .................................. CAGTTAATCACACCGACAATAGCCGTTGCAAAGTA 1259 34 100.0 34 .................................. TACCGTTACCTATCAGAAAAACAGGAAAAATATC 1191 34 85.3 0 ......T...T...C.............AA.... | ========== ====== ====== ====== ================================== ======================================= ================== 21 34 99.3 36 GTCGCACTCTCTTGTAGGGTGCGTGGATTGAAAT # Left flank : CGGACGGTTATGCTCCGTTTTTATGGAAGTAGGTTGGACAAAATGATGATGGTAATTGTTAGTTATGATGTATCTACTAAAGATGCAGCTGGGAGTAAACGCTTAAGACATGTTGCGAAAATTTGCGAGGATTATGGACAGCGAATTCAGAACTCAGTCTTTAAATGCTTAGTTGATGCAAAAACATTGGAGATTTTAAAAGAGCGTTTATTAAGCGAAATGAATAAAAGTACTGACAGTCTCTACTTTTTTAATCTTGGCACTAAGCATAATAATAAGGTAAAGTGTTATGGGTCAAAGAATGTTTTTGATTTAGAAGAACCATTGATTTTTTGATGCCTTAGGTGCGAATCAGAAGTGAACATGTTTTTCTTATAGATTCGCACCACTTTTCTAGTTAATTAATTTAAATTTACTTTAATGAAGGATACTTTTTATTCCTTATTAAAATTTTTAACCCAATATATTGAGAAAAAGTTATTTTTTTACTATATATTGCG # Right flank : TGCTCCCAAGCATTCTGGCTCTTAAACAATGTCGATGGCAACTTCAAAATGTACAAAAACGTCAATCTCAAATTGTACAATTATGGCAAAATAAATTGGCACATATTGATAAACTAATGGCGTCTTATGATGTTCATCAATCTAGCCATTTTGGATATACTAAGATCATCAAATACGAGTTAAATAAATGGAGGATTAATTATGAGCAACAAAGTGATCTTGGTAACGGGTGCCAGCAGCGGAATGGGTTTTGAGACGGCAAAGACTTTAGCACAGCAAGGCAATAAAGTTTATGGTGCCGCGCATCGGGTTGAAAAAATGGCTGCCTTAAAGGAATATGGGGTAACGCCACTGAAGCTGGATATTACTGATGAGACATCGAATAAGGCTGCTATTGCAGAAATTATTGCCAAGGAAGGCCGGATTGATGTCCTGATTAACAATGCAGGCTATGGCAGTTACGGCGCGATTGAAGACGTTGATCTGGCAGAGGCCAAGCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTCTTGTAGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //