Array 1 39620-44579 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXC01000010.1 Campylobacter curvus strain 13153 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 39620 30 100.0 34 .............................. TCTTTCTTGTAAAGATAAAGACCTTTGGCCTCGA 39684 30 100.0 35 .............................. TAAGAACTATAATAAGCATATTTGAATTTGGAGCT 39749 30 100.0 38 .............................. TCCTTACTAGTAGTAACTCCCCATTCAGGAGCAGAACC 39817 30 100.0 35 .............................. AAATGATAGAGAATTCATACAAATATGAACAAGGA 39882 30 100.0 35 .............................. ACGGCTTTCAAACATCTATAAATAATCCTACCGGC 39947 30 100.0 37 .............................. CGTTGCCGCTTAAAAACTCCCCGGCACTTATAAGCCC 40014 30 100.0 37 .............................. TAGCATCTTCTAGGCTGTCTGCGCTTGTAGGTGCGAT 40081 30 100.0 36 .............................. AAGTGCTTTTACACTCGCCCGCTTTTCGGACAGCGA 40147 30 100.0 36 .............................. TAATCTTTAAAAAAGCTAGGATTTAAGATATTTTTG 40213 30 100.0 36 .............................. TCGAAGCCTGCAAATTTGGCGTCAAAATCGGCTTTG 40279 30 100.0 36 .............................. TAAAATTTCGCTTTTGACCTTGAAAAGGTAGCGGGG 40345 30 100.0 41 .............................. TATGCCTCTTTACAAAATTCGGCTACTTCATCAACACTTTT 40416 30 100.0 37 .............................. GGAATTCAGGCGTCAGCAAAGACTTTGTAGCTGAACT 40483 30 100.0 36 .............................. TACATACCACCATAATATCCTACACCGCCAGCTATG 40549 30 100.0 37 .............................. ACGGAGTTATAAACGCCTTTTTCGTCGCTCCTATCAC 40616 30 100.0 36 .............................. TGCCTGAAAGGACCAATACGTCACCACGTTTTAAAG 40682 30 100.0 34 .............................. TACAAGGGGTCGGCACTAGCACTTCTTGATACTC 40746 30 100.0 38 .............................. AAATGCTTATTGTAAGTCGCAATATCGCTCCTAAGTGT 40814 30 100.0 37 .............................. GATGACGATGATGATCTAGAAATAGGAGCAGGTTCGC 40881 30 100.0 34 .............................. TAGCCTGTCTCAAAGCAAAGCCCGTAAAGAAATT 40945 30 100.0 38 .............................. AATAAGCGCACAAGATAAAGCCTCTATGCTTGAAATTT 41013 30 100.0 37 .............................. CCGCTTTTTGATAAAAGCTAAAATCATTAAAAATTAT 41080 30 100.0 35 .............................. GAATATATGCAAACGGATGGAGGAACCGGGCGTTT 41145 30 100.0 36 .............................. GGCTATTCGGCATTGACACGCCCGAATTAAAACAGC 41211 30 100.0 34 .............................. CCTTGCAATACCGTGATCGTGTCTCCGTCATGAA 41275 30 100.0 35 .............................. ATTGCGGCAGAGTTGTCGAAAAAATCAGTCACATC 41340 30 100.0 37 .............................. CGATAAATGGTGGGCAAAGCCTGCCGGTAGCCGTGCG 41407 30 100.0 36 .............................. TCCCTAAAAGCCGCAATAGTTCTATTGCCATAGATG 41473 30 100.0 37 .............................. TGCTAAAACGGGCGCAGAGGAGCGAGAGCTTCCGCCC 41540 30 100.0 35 .............................. TGATAGGAGTCAAAGAATAAGGGCAAACAGACGAA 41605 30 100.0 34 .............................. TTAGCCAACAAAGTATTTAATAAAGTTAGTCTAA 41669 30 100.0 37 .............................. AATTTAATCCCGTTGGTTGCGTATGGCAATACGATCT 41736 30 100.0 38 .............................. TCGTCGCTATAAACGCTATCGTCATCATATCGACACAT 41804 30 100.0 33 .............................. TTTGTGGCGCGTCCTGAAAAGTATCTACACTAT 41867 30 100.0 37 .............................. TCGAGCTGATCATAATAGTTATATAACTCCCAATTTT 41934 30 100.0 35 .............................. TTCGAGCTTGCCGCGTAGTCTTTTGTAAGTTGCTC 41999 30 100.0 34 .............................. CGAAGACATTGACTGGGAGATAAGGCTAAAAGGG 42063 30 100.0 36 .............................. TCAAATGGGAGTGCCAGGCGTAAAGAAATTCGTAAC 42129 30 100.0 38 .............................. ATTTGCAAGACGTCATAGTATGGCATGGTATCAAATAC 42197 30 100.0 35 .............................. GGATTGTAGGCATTTGCCTGAATTTTCTCGATCGG 42262 30 100.0 34 .............................. CTCAAAGTCAAATAGCACAATACGAAACGTCGCC 42326 30 100.0 37 .............................. GTAGGCTCTTTTTTCTTGATGGTAGGAATAAGAGCCT 42393 30 100.0 37 .............................. AAATTGATAGCAGAAAAAACAGGAAGAGCTTCTGAGG 42460 30 100.0 37 .............................. TCAAACTGGCACGCTAGAAAATATTATAAATTCACTT 42527 30 100.0 38 .............................. GGCATAATCCCTTGTTTTGGCAACTCAATGGAGCCAAC 42595 30 100.0 35 .............................. TCGGTAGGCGTGAGGCTACATATTTAAGAGCTTTG 42660 30 100.0 35 .............................. CTCGAAGCACCCAAAAAAATATCAATAGTAGGAGC 42725 30 100.0 35 .............................. ATGGGCTTGATGACAAGATACACTTTGCACCAAAT 42790 30 100.0 36 .............................. GTCCATAATCGTTTGCCATATTTGCGATAGCGCTGG 42856 30 100.0 34 .............................. AAGAAGCAGACAAGCGAATAGCCGAAAAGCAACA 42920 30 100.0 36 .............................. AAGTATTCCATAGGTGGCACAAACCCCGTGTTTTCA 42986 30 100.0 38 .............................. TCTGCACTTGGTGCCGTATTTGGAGCATAAAAGAGGCC 43054 30 100.0 35 .............................. TTTGATATGGCGAGTTTTGTAAGTTCTAAAACTAT 43119 30 100.0 38 .............................. TTGGCATCACAGGCTTAAGCGGTATTTGATTTTCGCAT 43187 30 100.0 35 .............................. TAAAAAACTCTTGACATCTTTATTAAATTAGTATA 43252 30 100.0 35 .............................. GCAGTATCTATGAGACATTGCTCTAGCTCAACAGG 43317 30 100.0 35 .............................. GCCGTTGCGCCGTCTGCCGGGAGTGCGAAACCTTT 43382 30 100.0 34 .............................. AATATCAATCCGCGGTTAAATGCTTCGTCTTTTG 43446 30 100.0 36 .............................. ATTCGTTTAAAGTGGCGAACTTTTTCACGATAGGCG 43512 30 100.0 34 .............................. AAAGATATCAAAGATAAAGGCACGAAACTTACCT 43576 30 100.0 37 .............................. CTAAATCAAATTCTAAAGGTAGCGATATGAGCTGGAT 43643 30 100.0 38 .............................. TATGCACAAATGAAATTTTTGTCACCTAAAATCCTAAA 43711 30 100.0 38 .............................. TCAAAGGCTTACGCAAAAACGAGCGCTCAGGGATATTA 43779 30 100.0 36 .............................. TATCGTTGGCTTTTTGGATTTTGACGAATATCTAAA 43845 30 100.0 36 .............................. GACTACAACAAGGCATAAAATCATACGGACTTAAAA 43911 30 100.0 37 .............................. AAGCCAAAATTGAGGCGTTAGAAAAAGAAAACGCTGA 43978 30 100.0 36 .............................. CATAGATAAATTTTGCCCTCAAGCTGCACTAATGCG 44044 30 100.0 37 .............................. AAGAGCCACCCTTGCTTAAAGCACCGCTAAGCGTCTT 44111 30 100.0 36 .............................. AGGGAAAAAGATAAGGATAAGAAAGGCGAAAACGGA 44177 30 100.0 37 .............................. TAGACGCATTGGCTGAATTCAGAATAAAAAAAGACCT 44244 30 100.0 38 .............................. GAGTAGTAACATCTATCAATGCATGAATAGACACAATC 44312 30 100.0 35 .............................. CTATATCCTAGCTGATACTAATACATACACCATCA 44377 30 93.3 139 .........................T...T ATGGCCAATACCTAATTATTCCAAAAATTTAATACCTTGAAAACTGTATAAAAAATAAATAGCCTCTATTTCTAACCAACAAATACCAAATTTCTTTAGTCTATACTTGTTTGTAGTATAATTACGAGATATTTATTTG T,T [44399,44405] 44548 30 76.7 0 ...........AA.T.A..A.....T...G | T,T [44552,44556] ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 74 30 99.6 37 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGCAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACCTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGTTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGAAATTTGATATTTTGGTGCT # Right flank : GTATCGAGAGCATATTATAAGTATAATTCAAAACAAATATTTTATGCCCCTTAGAAGATGACATTTATGTAAAACTTTTAAAGTTCAATAGCAAGCACCTCAAAAAATAAATTTCATCAAAATACTTAAAAGTTAAAGACTAGCCAAAAACCAGTCAATGTACTTTATGTTTTAGTTAATATATCTAAAATTACTACTAATGCCATATGGTGAGCGTAGATCAAATAATGATATTCAAAAATATAAGGAGCAAGTAGTCCATGCTTAATACAACAAAACACACGAGTTTTATAAGATGGCACTAAAAATACTTTTTTCTCCGAGCGAAAGCAAGAGCACATTTGCAGGGGATAGCTACATACGAAAAGAAAATTTCACCTTTGCTAAGCTCTTTCATCTAAGGCTTGAAATTTTAAAAAAATACGCTTCATTCGTAAAAACGGCAAGCGATAAGGAGCTTTGCAAGCTTTTTGGTTTTAAAAATTTAGATACCGACGATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 51065-52410 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXC01000010.1 Campylobacter curvus strain 13153 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 51065 30 100.0 32 .............................. ACTAGAAATAAAAAAGTAAAAATAAATAGATA 51127 30 100.0 38 .............................. TGCGAAAATTTCATATCCCTTATTTAAAAGAGGTTTTT 51195 30 100.0 37 .............................. GTTCATTGACCTTTGCGTATTTAGGCCCGATGATTTG 51262 30 100.0 36 .............................. GTCTAGCATCTCTCCATTCCACTTCCTTGTCATCAA 51328 30 100.0 35 .............................. TTTTTGTTCTCAAACATATCGTTTGGTAAATTTAG 51393 30 100.0 35 .............................. CGAAGCTGTCGCCGATCTTTGAAAGAGCTCTTGCT 51458 30 100.0 36 .............................. TTTAGCACATCCCACGCTCTAAATTTTATCTCTTTC 51524 30 100.0 35 .............................. CGCATAATGGTGATTTTCTAGGCGATACGTGGGAA 51589 30 100.0 35 .............................. CCCGAACTTCGGGAGGAATACAAAGAGCTTCTATC 51654 30 100.0 35 .............................. GTGCATGAGAATGAAAATTTTGACGCGATAGTGCA 51719 30 100.0 36 .............................. CATTGCAATGCGCCAAAAAATTCATCTGCGCTCATA 51785 30 100.0 35 .............................. AACTTACTAAAAACATTTTTTAGCAATGAATTAGC 51850 30 100.0 37 .............................. AGTGACGATGAGCTGGGAGAGCTTGAAAGCTGGGTAA 51917 30 100.0 36 .............................. ATGCAAAAAATCAAAACAACAACAGATACCTTACAA 51983 30 100.0 36 .............................. GTCGAGGGCAAGAGCGACATAATAAACGGCACCGAT 52049 30 100.0 36 .............................. GCGGTCAGCCAACGATCGAGTGGCTGGATAATAACG 52115 30 100.0 36 .............................. CTTTTCCTCCACTCCCACGGCGGGATAGGCTCTTTA 52181 30 100.0 37 .............................. CCCGCATAGAGGCGTCTCAAAACGAGATTAAAACGGC 52248 30 100.0 36 .............................. AAAAGGCTTATAGTTTTAAGCAAAAACGAATTCAAA 52314 30 100.0 37 .............................. AATTTATTAAAATGTTTACATAACATCAGGAGTTTGT 52381 30 96.7 0 .........T.................... | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 99.8 36 ATTAAAGATCATTCCGTTGGAATTTGAAAC # Left flank : AAGAGGAGATATTTGGTCCTGTAGGTGTCGTCATCAAATTTAAAAACGAAGAAGAGCTTTTAAAGATGGTAAACGACAGCGAATACGGCCTAGGCGGCGGGATCTTCACTCAAGACATCACAAAAGCCTTACGCGTGGCTCGCTCAATGGAGACCGGACGTGTTTGGATAAATACCTACAATCAAATCCCTGCCGGTAGCCCATTTGGCGGCTACAAAAACTCAGGCATCGGCCGCGAGACGCACAAGATCATCTTAGAGCACTACACTCAGATGAAAAATATCATGATAGACCTGACCGGCAAACCAAGCGGCTTTTATAAACAATGATTTAGGGGGATACACCCCCTAAATTTCAGACGTTGAAGCGCTTTTTAAGCTTTTGATAATGCTAAAATATCGATATTTGAATCATCATAAAATTTAAATATTAGCTGATTTTAAGGAACAAAAACATAGGGCTTGACTTTTAATAGGCTTAAATTTTCATATTTATGCGCT # Right flank : CCGCAGGTTAAAAATTGATAAAATTTAGAATTTCTAGCGCAATCAAATCTTATAAAACGACGCTATCGCCATCGCTCTGCTTGCAGTTGCGAGCATGGCGAAGCAAAAATCGTGCTACATGTCTGGCGTCTTGCGGAGCGTATAAGATTCGTGAAGCGTTTGCAAAAAATATCAACACTTTTTTAAAATAGAGCCACTCATTTAGACTCAGACACCCGCAAATCCCGCAGGGTACGCTCCCTCAATACTAAAGGCTATATCAATAAAAATCGCAAATTCCAGCCTACGCTACCACCCCATCCTCATAAATTTTCACGATCTTTTTATGCACCATCAGCGAAACATACATTATCGCTCCGCCAATAAGCAGCCTCAAAAGATCCGCGTCTTTATGCCAGATCACTAAATTTACGATGATGGCGGCCGGGATGAGCGCGTTGTTCATGATGGCAAGCACGCCGCTATCGACCTCGCAAGCGCCTTTGTTCCATAGATAATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGATCATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //