Array 1 995653-993970 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRIZ010000006.1 Streptococcus equi subsp. zooepidemicus strain SEZ_18-057 tig00000177, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 995652 26 100.0 39 .......................... TGTCAAAACATGTTCCTTAATATAAGTGTTACCGTCTCG 995587 26 100.0 40 .......................... TTGGTTAGACTTTGTATTTGTTTTAATATACCTAGTCTCG 995521 26 100.0 39 .......................... ATCTATCCATATCTGATTTAAAAAAAATGTACTGTCTCG 995456 26 100.0 39 .......................... TTTTTGGACAGTAGAAAAAGTAACTGCACATGGGTCTCG 995391 26 100.0 40 .......................... CAAAGGTAAAAGCTAAGATACCCGTTAAACTAACGTCTCG 995325 26 100.0 41 .......................... CTGCAAATAAATCTAAGAACCTCATTGAAACTCCTGTCTCG 995258 26 100.0 39 .......................... AAGAAGGAGTATTAACTAAGGATGATTTGAAAGGTCTCG 995193 26 100.0 40 .......................... CTATGATGCACAAAAAGGAGGTTAAGATGTTTACGTCTCG 995127 26 100.0 39 .......................... ACCTATCTAAAGCCGCCGGGAATGAACAATAAAGTCTCG 995062 26 100.0 41 .......................... CTGAGATTGATATCCAAAAAACAAAATCCAATGCCGTCTCG 994995 26 100.0 39 .......................... AGCAGCAGCCATGGCGTCTGCAGCAGCTTGTTGGTCTCG 994930 26 100.0 41 .......................... TCGACGCTGTGGAAGGAGGTGATTAGCCTTGGAGAGTCTCG 994863 26 100.0 42 .......................... ATTTCGTCCCTCCTGTTTTATGATGTAAAAAAGCCTGTCTCG 994795 26 100.0 41 .......................... TGGTACAGGTTGGGCCTTATTTAAAGGCTCAGACCGTCTCG 994728 26 100.0 42 .......................... AAGAGAAGATGTCCGACTCACCGAGTCAGAAATCCGGTCTCG 994660 26 100.0 40 .......................... TTGTTGTGTCAAAAAAGCGATAACGATCACCCCCGTCTCG 994594 26 100.0 42 .......................... GTTAAGGGTATTGTTTTACAGGATAACAAACGTAAAGTCTCG 994526 26 100.0 40 .......................... AGCTCGCTTAGGGTTAATGCCAGACTCTACTCCAGTCTCG 994460 26 100.0 41 .......................... AACTTGGGGGTTGATCAGAGTGGAGGGGTTATCTAGTCTCG 994393 26 100.0 43 .......................... CCCAGTCGTTGTGTTGCTTGCTAATGCTACGTCTCTGGTCTCG 994324 26 100.0 39 .......................... GAAGTTGAAATTGTCGAAAGGTACTTGAATCTCGTCTCG 994259 26 76.9 41 ..TTTC.T.......C.......... GATTGCTTTTGGAGTAAAACCGATCGGCTTAGCTTGTCTCG 994192 26 80.8 41 ..TTTC.T.................. GTTTGAATCAGAAACACGTGATACAAAGCTTGGACGTCTCG 994125 26 76.9 40 ..TTTC.T.......C.......... CTGAAATTGCCCCTGCTGAAAACATGAAATTAAGGTCTCG 994059 26 80.8 37 ..TTTC.T.................. GCGATACGTGCCTTTACGATGTTGCGACTCCGTCTCG T [994035] 993995 26 61.5 0 ...TT.GT...T.C....T.C.T.T. | ========== ====== ====== ====== ========================== =========================================== ================== 26 26 95.3 40 CCCCATACGGGCGAGTGGATTGAAAT # Left flank : TATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACACTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAATAAAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCAGTCTCG # Right flank : CTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGACTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCTGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTA # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCATACGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [33-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //