Array 1 394945-393402 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNND01000001.1 Capnocytophaga granulosa strain DSM 11449, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================= =============================== ================== 394944 45 88.9 30 ..........AT...T.......C.........G........... TTTTGCACTGTCAAAATTAAACAAGAATAT 394869 45 100.0 30 ............................................. AAGGTTACTTTTCAAGATGAGTTTGGAAAT 394794 45 97.8 30 .....................................T....... CTATCTGAGATGAAGGATAAGTACTTAGCC 394719 45 100.0 30 ............................................. AGATAGGGAGGAGGATATAAAAAAAGTTAT 394644 45 100.0 30 ............................................. GAGATGAAAACAGCCATCATTACCAATCCT 394569 45 100.0 29 ............................................. TTCATCGGAAAGAGGGTACAGCGGAGCGC 394495 45 100.0 30 ............................................. CAACGTAAATATGAACTAAGAGCCTTTGCC 394420 45 100.0 30 ............................................. CGATAGTCAAGGACATGAACGGGCAGATAA 394345 45 100.0 30 ............................................. CAAGTTTCTGAGTAAATCGACGACCTGAGC 394270 45 97.8 30 .....................T....................... CCAAGAAGCAAACAACACAACGTGGCGGCC 394195 45 100.0 30 ............................................. CATGCTGATTTATCATTGACCAAGAACAAC 394120 45 100.0 31 ............................................. AGTGGATGGGGAGCGCCTGATCCTACACAGC 394044 45 100.0 29 ............................................. TTTTCCTCATCCGAACCTTCCCAAACTGC 393970 45 97.8 30 .....................T....................... GGAAAAGGAACTGAAGGAGAAAGAGGAGGG 393895 45 97.8 30 .....................T....................... TGTATAAAAAACTCGCTTTCGAGAATCACC 393820 45 97.8 30 .....................T....................... TCCACAGCCTGCCCTTTGTCGTTGAGTAGG 393745 45 97.8 30 .....................T....................... CCAATTATGGCACTAACATCAATACATTTT 393670 45 95.6 30 .....................T.....................C. CCCCCCACTTTCGGTGGCTATCTTGACAAT 393595 45 97.8 30 .....................T....................... GCCCGCTTGGTTGGCTTCGTTCTTAGCAAA 393520 45 97.8 29 .....................T....................... TGATATAGATATTTATGTAGCACAAAACA 393446 45 97.8 0 .....................T....................... | ========== ====== ====== ====== ============================================= =============================== ================== 21 45 98.3 30 GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC # Left flank : CCGCTGGCAAATCACATGATGTGAGAGTTGGTGTTGCGTAAGCAGGCGCAGCTTGTTTTTCACTCTTCACTTTTTGTTTTTCATCTCTTTGCAGCCATCCTTCTAAACGCATAATAAGGCGAATAGCTGCGATGCTTTGGCTAATGGTGGCCACTATAGTCTTCCCATTGCTCTCTATCGGCTCACGACGAGCGTATGTCCAAAGTATATCTAAAGCCTCTTCCATAATGATTAATGATTAATGCCACTAATGGTTAATGGCTGACCACTGACTACTGAAAAACGAGGCAAAGTTACAACAATTCAGGTGTCGAAGTCAAGGGGAAGGCTTATGAGAAGTAAGAATTTATACAATAAAAAAATATGTTAAGTACTTAACAGAAGTTAGTGGTCAGAGGTCAGTCTATAGTGACTAACCTCTTATTCGTTATGCTGTTACATCTAAATATGTTAATTGTATATTAAAATCAACTTGTAAAACATGAATTAGTATAAGTATT # Right flank : CTCAATCTTTTTAAAGAGATTGATTGTCTGTAGGTTATTCAAAAGTTCAAAAAGAGAAAACCTTCTTTTCTATTCTATCTTAGGAATAAAAAGGAAGGTTTTTCGTTTTCTAAAATTTAAAAAAGAGTGAGCTGAATACAATCTTTAGGAGGATCTTTCTTTGATTGACAATAGAAGATCTCTATTCCTTCAAATTGCTTGTCGGTGATAGTAAATATGGCTACTTTTCCAAACTCAGGGAGCCATTGCTTGACACGGTTGATATGTACCTCGGCATTCTCCTTGCCAAGGGTAAGTGCCATTCATCACAGCTGATAAGGATCACATTGTTTTTCATCAGTTCCTGTATCAGCTGGTGAGAGAGGGTGATTTGGTAATGGTCAAGCATCAGTAGTCCTATATCTTCTATAGGGACACTGCCTTTTTCTTCTTTGGTTTCTGGGTCGGTAACCTTTAATTGTTTGTCTTTCAGCTTCAAATAAGCAGGGTTACCTATATAA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC # Alternate repeat : GTTGTGAGTTGCTTTCAAATTTGTAACTTTGTGACCTCAAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.22%AT] # Reference repeat match prediction: R [matched GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.50,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //