Array 1 430129-437137 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035280.1 Clostridium sp. JN-9 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 430129 30 100.0 35 .............................. ATAAGCCAGGAGGTCAGGGTGGAGATATTACTGAG 430194 30 100.0 36 .............................. TGCAATAACTCTTGCCTCAATAGCACTAAAATCGGC 430260 30 100.0 36 .............................. TTAAGTACAGCTATGGATATTATTGCTGCAAATATA 430326 30 100.0 36 .............................. GTCTGAGGATGATGTAAGGACTGAGGATGCAAGAGA 430392 30 100.0 36 .............................. TCAACATCGTAAGTAAATGTCCATACTGTAGTTTTT 430458 30 100.0 37 .............................. GAATTATACCTCAAGGTGTAAAAAATACTTTTGGTAC 430525 30 100.0 35 .............................. TCACATGAAGAGCTTGGCCAATACATAAGCCTTGA 430590 30 100.0 36 .............................. GTCCAACCCTGTCCAGCTCAGCCTTAAATTCTTCTG 430656 30 100.0 36 .............................. GTACAAGCAATGGAAAATCCGATTATAGCGCATATT 430722 30 100.0 36 .............................. TTAATTATTACAATTTTTAAAATCATCATATAATCC 430788 30 100.0 35 .............................. CAATTAGTCGCAGCGCTTCCACAAATAGTAAAGGC 430853 30 100.0 36 .............................. ATGGATGGATTTGTGGTTACTGTTGCAGGATCAGGT 430919 30 100.0 37 .............................. TTTAATGCAATAAAGCCATGCTTGTATAAAGCAGGTG 430986 30 100.0 36 .............................. AACACTGAAGGATTTCTTAGAAGCTTTATTAATGGA 431052 30 100.0 36 .............................. AGATGAAATTGATATGAGTAATGAAATCCATATAGA 431118 30 100.0 36 .............................. ATACTAATAGCGGATTTTATAGTAAAAAGGTTAGAA 431184 30 100.0 37 .............................. TTCTAAGTTTATAAAGTGAAGTTAAATACATATCTTG 431251 30 100.0 36 .............................. ATTCTATAATTTCATCAACTGTCATAAAGTACCTCC 431317 30 100.0 36 .............................. TTAGCAACTGTAACCACTGACGATTTGAGAATGTAC 431383 30 100.0 36 .............................. AAAATCAGCATGGATGGATTAGGTAATTATAGTAGG 431449 30 100.0 37 .............................. TTTCATATATATCTCTGGGATCAGTCAGATTTTCATT 431516 30 100.0 36 .............................. GGCTATTTAAATATGCAGCGCTATTATGATGGGGAA 431582 30 100.0 36 .............................. TGGTTTATAGGAAAAGATGTTGCAGAAGCACTAGGA 431648 30 100.0 36 .............................. TTCAAAAGAGTTTGTATTGACTTAGTTGAGGATTTA 431714 30 100.0 35 .............................. TCATTAAAAACAATATATAGAATTGCTGATGCTTT 431779 30 100.0 36 .............................. TATTTCCATCTGCTGCAGCTTCAACATCTTTTTTTA 431845 30 100.0 36 .............................. TACAGCACAGAAAAATTGCAAAAGGATTATGGATTC 431911 30 100.0 35 .............................. GGAAAATACTTTTCTTTAGTTTCAATACCTGGTGC 431976 30 100.0 35 .............................. CTCTGAGACTACTATGCTATAATACAAGTATCTCA 432041 30 100.0 36 .............................. TAAGCAATGCCGAAGAAAAAGCACTTCGTGGTGTAA 432107 30 100.0 36 .............................. AGACAAGTCCTGCAGAGCAAAGACAGCAGGATGAAG 432173 30 100.0 36 .............................. GCCTCAGTAACCTTAATCATTGTTTCACCCAGGCAG 432239 30 100.0 35 .............................. GTTACTATTTGGTTAGTCTCACAATATGGGTATCC 432304 30 100.0 36 .............................. GTTGTAACCACCTATCTTCACCATCCATATATGCTC 432370 30 100.0 36 .............................. GCTTAATGGAAAATTATCCACAAAAACAGGACTTGC 432436 30 100.0 36 .............................. GTATTAGCTGCATTCGTCTAATTACCACTGAAATAA 432502 30 100.0 36 .............................. ATCTCATTTTGTAAATTACCAGCAACATCACCGCTT 432568 30 100.0 36 .............................. GTGCTTGAAGCAATTCTTGTTGTAATTCGTCATAAG 432634 30 100.0 36 .............................. TTGATAATTCTTTATTCTCAATTTCATCCAATAGTA 432700 30 100.0 35 .............................. TAAAATAATCCTTTTTTATCTGTTCCACCAGTTGC 432765 30 100.0 35 .............................. CACAAGTTAATAAAGTCATAGACTATAATAAAGAG 432830 30 100.0 35 .............................. AAAAAATATAATATTCTTTATGGTGGCACCGGAAG 432895 30 100.0 35 .............................. ACTTTATAAAATCGTCTTATAAATTGCAAGCTCTC 432960 30 100.0 35 .............................. TCTGTTGAATAATATACTTTATATGTTAGTACATC 433025 30 100.0 36 .............................. ACCTCATACATTTCAAGCATGTGCAAAGTTAAATCA 433091 30 100.0 36 .............................. TTAGCTCCGTTGGAGAGAATTCACAAGTTTTCCCTT 433157 30 100.0 35 .............................. AAACAAGTTTTGATGATGTATATAATGTTTTAGAA 433222 30 100.0 37 .............................. ATTAGTAACTCTGCTTTTATGACTAAAAGAATGAACA 433289 30 100.0 36 .............................. AATTGATCTAATGTTGTTTTACTCCAATTTTCAATT 433355 30 100.0 36 .............................. TTAGGAAACGTATCCTCGCAGGATTTTGCAAACATA 433421 30 100.0 36 .............................. TCCAAAACAACAGGAGTATTGGCTTTTAAGTTTTTA 433487 30 100.0 37 .............................. TTTTTTAAGTTGTGTAGGACTATTAGGATTACTAAGC 433554 30 100.0 35 .............................. TAAAGTTGAAGAGGAGCGTTTTTTACAACCTCCTG 433619 30 100.0 36 .............................. GTTATAAACGTTATAGCACTAGCTAATGCTGTTGCA 433685 30 100.0 35 .............................. GTATCAATATTCATATTGTTTTCATTTCCTACACC 433750 30 100.0 36 .............................. ACAATAGTCACACGTATATCCCCATCTATTGCATCT 433816 30 100.0 37 .............................. TATGTTACAACTTCTAAATCTGTAATAACAACTGGAG 433883 30 100.0 36 .............................. TGCAGTTGCACACATAAGTTTTAATTTATTACCATT 433949 30 100.0 36 .............................. TATTGAGTAAGTTATTATATCCTTTAATCAAATTTG 434015 30 100.0 36 .............................. TCAAGAAAACTCCTCCTTTTATATATATCCATGTCG 434081 30 100.0 36 .............................. ACGGGAACATCACAGAAAGAACAATTATATTTTGTA 434147 30 100.0 35 .............................. ATCTTAGTTCATAATGCTATCAGAATAGCTCAATC 434212 30 100.0 35 .............................. GAAGCAGGGCCACAGAATCCAACTATTGCTCAATA 434277 30 100.0 36 .............................. AAAGATTTATTAAGCAAAGAACCATTGCAATCAATA 434343 30 100.0 36 .............................. TGTACTATCTACACTCATAGCATTTATTTACCTCCT 434409 30 100.0 35 .............................. TTTTATATTTTTCCATTGCTTCAGTATCACCATCA 434474 30 100.0 35 .............................. TTACCTTATATGTTATAACGTATTGATACCCCTTA 434539 30 100.0 35 .............................. TTTGTTAAACTTCTTTGCTATCAACTTCGTTAAAC 434604 30 100.0 35 .............................. ACTTTATTTACATGTTCATGAATTTGATTAACCAT 434669 30 100.0 36 .............................. TGATATATCTACCCTTAACATGGTTACATAAACAGT 434735 30 100.0 35 .............................. TTTGTCTACTCTTCCTTGTTGTCAACTTCGTTAAA 434800 30 100.0 36 .............................. GCAATTATTATTGGTCTGCTCAAATAGAAATTCTTT 434866 30 100.0 36 .............................. CAACATGGCTGAATTGGCTAGAGCAAAAGAATCAAC 434932 30 100.0 35 .............................. CCATTACATTTGACACTATGCATAAAAATAAGCAC 434997 30 100.0 35 .............................. GCTTCTATCCAGTCGGTTACATCTTTGTTATCTCC 435062 30 100.0 36 .............................. CTGGAAGAATGTATTTAGAACTCTTCTAGTATTGTC 435128 30 100.0 36 .............................. GTATGAGAAAGAACAGCAAATAGTCGAATGGTTGCA 435194 30 100.0 36 .............................. AGTATCACTCATGCCACTTTCTACAAGCTCAGCTAC 435260 30 100.0 36 .............................. TGGAAAGTTTAACAGAAATTGAAAGATTGATTATTA 435326 30 100.0 37 .............................. ACTTGAAACTCTTGCTTGTGTTATTTGGAATAGCAAG 435393 30 100.0 36 .............................. ATGACAGAATTTTAGAGATGTGTACGCCAGTTCTTA 435459 30 100.0 36 .............................. TGAAAATGCAGTAAAACATGGGTTTTGGGAAGATTG 435525 30 100.0 36 .............................. GATTTCATAGCACCTATTATGCTTTGGTAAAACTTA 435591 30 100.0 36 .............................. TCCAAAACAACAGGAGTATTGGCTTTTAAGTTTTTA 435657 30 100.0 37 .............................. TTTTTTAAGTTGTGTAGGACTATTAGGATTACTAAGC 435724 30 100.0 36 .............................. AAAACTAGAAATTTACTATTTTTACATGGGGAATGA 435790 30 100.0 35 .............................. TGGGAAGATGGAGGGAACAAATCTTAGGAGGAGTT 435855 30 100.0 35 .............................. TAATTATTATAACACAAATATTTATAAGGAACTAG 435920 30 100.0 36 .............................. TTACAACATTGACAAGAATTTCTGAGGATAATTTTA 435986 30 100.0 36 .............................. AACTCTTGGAGACATTGACACTACAGATGGGCATAT 436052 30 100.0 36 .............................. TGGGAAGATGGAGGGAACAAATCTTAGGAGGAGTTC 436118 30 100.0 37 .............................. AGTTTAAAAGACATTGTATTCTTGGGTTCTTAAGTGG 436185 30 100.0 36 .............................. TGGGTATGGGTAATCGAGTTCGAAAGAGTTAAGTCA 436251 30 100.0 36 .............................. GTCTGTGGAAATCCAAAACTGTTACATGCTCATGTG 436317 30 100.0 35 .............................. AAGAGAGAGGCTATAGTTAATGCAGATGATGAATA 436382 30 100.0 36 .............................. CAAACTAAAAAGTAACACACCTGGTGGACTGCCATC 436448 30 100.0 36 .............................. CAATAAACCCTGTTGGCAATGTTTCCTTAGTATAAC 436514 30 100.0 35 .............................. CCAGTAAGTAGCCTTAATTTATACTGTTGGCCATC 436579 30 100.0 36 .............................. TGTCGCAATTTATTTCTTGTTGCATCCTTAAAATAA 436645 30 100.0 37 .............................. ATATCTTTCACGTCTTCTACTATTTTTATATAATAAA 436712 30 100.0 36 .............................. TATTGCGATATAACAGCAGCTGTAAAAGGAACTAAG 436778 30 100.0 36 .............................. CAGTTCTTTTCTTTTATTTATAATGTCTTTTGCTGT 436844 30 100.0 36 .............................. ATGATATTGGAAGATGGACTTGATTTTCAGCAGTTT 436910 30 100.0 36 .............................. TTGTGCAGGAGGCTTGATTATGATAGCTGGTGAAAA 436976 30 100.0 35 .............................. GCAAAATAATCTATAATACTAGTACTATCAACATA 437041 30 100.0 36 .............................. AGTACCAGAGAAATTACGCATGTTGTTAGAAACAGA 437107 30 80.0 0 .............T....CCCTG....... | T [437114] ========== ====== ====== ====== ============================== ===================================== ================== 107 30 99.8 36 GTTTTTATATAACCATACTGGAATGTAAAT # Left flank : AATACGAAGGATTTAGGATGTGGTGGTAATTCTATGTATGTTATATTAGTTTACGATATAGTTTTGGATGAAGGCGGTGCAAGAGTATCAAGGAATATATTTAAAATATGTAAAAAATATTTGACACATGTACAAAAATCAGTATTTGAAGGTGATATAACTTCAGCATTGTTGCAAAAACTTAAGCTAGAGCTAAATGCTTACATCAGAAAAGATATGGATTCAATAATTATTTTTAAGAGTAGAGATCAAAAATGGTTGAAGAAAGAGTTTTGGGGTCAAGAAGATGATAAAACATCTAATTTTTTCTAATGTTTTTAATACAGTCTGTCTACCTCCAGTAATGTAAAATTGCTATAAGGTAGACAGATGTGAATTTATTGAATTTACAATGGTTTTATGAATTTTTATTTGAAATATTTAATTTTTTAATATAAAATTTAATTACCGACAGAAAGGGTGGGTAGGATGTAGTGATTTAGGGCCTTCTACAGCCACCT # Right flank : TTCATTAGAATTTAAATTTTTACACTTACATATAGATTATAAGTGCCTTAGCCTTGACATGTGATGTATTTAAATTTGTTATTATTAATTAAGCTAATATTATATATGGTAAGATATATATAACAAACAAGTGATATAATTGATATTTCTATTCGTGATTTCTGCTAATTGATGAACTATGGAAAGGTTAAGATTGGGGGCTTTACATTGGGGGATTACTACTTTAAAGGCGATGGAAGACATAAACTTAATAGAAAAGAAAAGGTATACGAAAAGCTGAAAACGATAACAAGAACTCTAAAGATTAACAATGATAGCTATAGGGATGAAGTTGGATTTGATGCTGGTTATATAGCTAAAATGCTGAATATTTCAAGAAATAATGTAAGCAAGGAATTAAACTGTCTCTTAAATGAAGGAAAAGCTATTAAGATTTTAGGAAAGCCTGTACTATATCTAGATAAAATATACATTGAATCAAAATTCAATATTATTATTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATATAACCATACTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //