Array 1 14490-14254 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLZ01000006.1 Paenibacillus sp. 7541 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 14489 32 100.0 36 ................................ AATCTAGATCCCAAATCACTCACATCTCTTCCTCCT 14421 32 100.0 36 ................................ AATTCATCAAGCGTCCCTTCGTTCCAGGCATGCACA 14353 32 100.0 36 ................................ TTGAAAGCCAATTATACTCACAAAGTCCAAGAGATT 14285 32 68.8 0 ..........G......CC.A..G...ATTTG | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 92.2 36 GTCGCTCTCCATGTGAGAGCGTGAATTGAAAT # Left flank : GATGAGTATCCGCCATTCTTATGGAAGTAGGTGAGCCCTAATGCTTGTACTCATTACTTATGATGTTCAAACGTCAGGGGCAGGAGGTGCTGCAAGGCTGCGTAAAGTGTCCAAGGCGTGCCAGAATTACGGGCAGCGGGTGCAGAACTCCGTGTTTGAGTGCATTGTGGATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTGACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGCTTCTATCGGTTAGGCAATAACTACAAAACCAAAGTAGAGCACATTGGGGCCAAGCCGGCGATAGATTTAGAAGAGCCGCTTATCTTCTAGTGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTAGAGATTTTGGCTGAAATTAATGAAAAAATTCGTGCTCGCAAAGTAGGTTCGCACTTTTAGGCATGCGAAGCCTTGTGGCTCAAGGCTTCGCAAGGCCCGCT # Right flank : GCTCCAACCTAATTACCAGTGCTTGAAATCATAACAGGCTTGAAGCAAAGGGGAAGAGGGAGACTGGAGAAGCAAAGCGCTCGCCTTTGTCCCCGGATTTCAACCGCTGAGGCGGTAGTAATCAAGAAATCTGGGGGTGGGCAGCGATCGGAAGTCCCCTCATTCCCCGTAGCGGCATACTTCACTGAAAATCAAGCACTGATCTCTGATTTGAGCTCTTTATTTTGATGAAAATGGATGAGCGGTTGCACGCCATGCGAGACGTGGTCTTGTGTATATCGCCCATGGACCTGCTAACAGCGTATTGCCATTACCGTTAACACTAAGGTAGTGAAAAATAGCACATGGCTTACAAAACAAAGCGTGTATAATCATCAGGTAAGCGAATTTGCTTTCGGCAAACTCGTGATTTTTTTCACTTATATTGTGAAAAAAATAACAAACTACGAGAAGGAGTAGGTAGCATGAGACATCTTAGGGGCAAGTACGGAAGAAAAAGT # Questionable array : NO Score: 8.47 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCATGTGAGAGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 24790-23015 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLZ01000006.1 Paenibacillus sp. 7541 contig00006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 24789 32 100.0 34 ................................ ACCACCACTTAATCAAGTCTTTAAGCCACAACAG 24723 32 100.0 34 ................................ GGTAGAGAAGAAAAAAGATAGGTTTTTGTATCAT 24657 32 100.0 36 ................................ GCTTGTCAGGGAGTGGAGCGCGTCCAGGTCGTGCTT 24589 32 100.0 33 ................................ TCCCTGGTGCTTTAAGTAAAAGTAAGCACAGAC 24524 32 100.0 34 ................................ ATCGCGAGGATACGTTCCCATGCGTCTTCTAACG 24458 32 100.0 35 ................................ GGGTCGTGCAGTGGGGAAGATTGAGAATCTGGAAA 24391 32 100.0 35 ................................ CCTTGATATGCTCTAACAGACGCTGACAACTTAAC 24324 32 100.0 36 ................................ CTCCCAGGCCGAAGCAGCCCAAGAGCTGACCACATG 24256 32 100.0 38 ................................ AGCAAGCCTATAACGCGAGTTGAGCTGGGGGTAGGATT 24186 32 100.0 35 ................................ ACGCTCAACCTCTAAATCAGTCATTTGTGGATTAT 24119 32 100.0 35 ................................ CCACCTGAGTATATGAGCTCCCCCACTTCCAAGTC 24052 32 100.0 33 ................................ AACTACACAAACTCGGTCATCAATTACGTAATC 23987 32 100.0 37 ................................ ATCTAAATAAGGAGTTATATAAATATACTTGTTCTCA 23918 32 100.0 36 ................................ GCCATTGCTACGGCTAAGCCCGCGTAAGCTGCGCCA 23850 32 100.0 34 ................................ TTGGCGGATATGTCACGCAACAACAAACGATTAC 23784 32 100.0 34 ................................ AAAACAGGAGCCGGGCCCGACCCGGTTTTTGTTT 23718 32 100.0 38 ................................ CTTAATCGCATCAAGTACGGACGATGTCGGCTTACCTC 23648 32 100.0 38 ................................ GTTACTCCTGATCCTGCTGCCGGTATTTCAAAGTCAGA 23578 32 100.0 33 ................................ TGCGCCATTTCCAACTCAGCTGCTGCCGCATCG 23513 32 100.0 34 ................................ ACCGAACTAATTATGGTCATGACGTGGGTTAATG 23447 32 100.0 35 ................................ AACCGGTCTGCAATACCACTGATGATGCCGTATAC 23380 32 100.0 33 ................................ AAGAGTTGTTGAGCATCTATACTGCCGTGCTTT 23315 32 100.0 36 ................................ TAAAATTATATTTCAAAAAAATAAAACCCTTATCTA 23247 32 100.0 35 ................................ TATCATCGTTACCCCGAACTGCAGCTGAAGATCGT 23180 32 100.0 35 ................................ ATTGTGCAAAGGAAGGATATTGAGCAATTGATGCA 23113 32 87.5 35 .........C..GT.A................ TGATAGTATTTGGGTCAAGTGGCATCCGCATTAGT 23046 32 78.1 0 ..T.........GTAA....T......A.... | ========== ====== ====== ====== ================================ ====================================== ================== 27 32 98.7 35 GTCGCACTCTATACGGGTGCGTGGATTGAAAT # Left flank : CTCCTGCATAAACAGCTTCACTAACCGGTCAATCCATTGCTCCTTAATGGTGATCGTCGGTGCTAGAATTAATGTTGGCTTATTCAGCCGCCTTATGATTTCGAGTCCAACCACGGTTTTGCCTGATCCCGGAGGTGCCACAAGATGAAAATGACGATTGCTCAAATAGCGGTCAAGCTGGTCCAGCACCTTCTGCTGATAGCTTCTCCAGGGATAGATAAAAGCGAGATTTGCTGGGAATGATTTCATAATGGCATCCTTTCTATGGTGGGTATGCTGTTTACATTTTACCAGAATGCAGCCTATCATGTTGAGGAATACCAGCTTCCCTGGTGCGAACCCCAAGCGCACATGAAATCCCTGGGAGGTTCGCACCCCGCGTCCCGCAAGGGGTTCAGCCGATTTGGTAGAAAATAGGGGGAGGTTATAGTATGCTAAAAAGGAGGTTCGCACTTTTGAACTTATAAAGCCTTGTACAACAATGGGTTATAAGGTGTGCT # Right flank : TACCCGCATTGTCCGAATGAAATCGTGCCTGGTGAACATTTTGTAAGTCGCAAATTCTTATCTCCATGCAACCCAAAAGGTTGCTTTTTTGTGATTTTCGTAAAACTACATTAATAGTAGTGCTAACGCGTCAGTTTTTCAGAGAGAATAATTACAAGGTGGCTAAGTCAGAGGGATAGATCTATCTTTTTACCTATTTATTGGTGAAATCTGGCGAATTATATGGTAAAATGTAACTAATTGTTATGTCATTTCGCGAGGAGATGTGCTTAATGTATATTGCACACGTTCGAGAACTCGATAAAGAAATTCAACCAATAAACAAGCACCTGCTTGGAGTACAACGGCTGGCGGAACAGTTCGGGGAAAAGCTGGGCCTGAAACATGTCGCTGGGTTAGCCGGGCTGCTTCATGATCTGGGAAAGTATAGTGATAAGTTCCAAGAATACATAGACATCGTTGCCTTTCACCCTGAATTGCCTCAGCCGAAGCGTGGTGAG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 205310-204012 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLZ01000007.1 Paenibacillus sp. 7541 contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 205309 32 100.0 34 ................................ ATGTTCATTCACAAAAAATTCTTTAAATAGGAGG 205243 32 100.0 35 ................................ TCTTTTTTCCTCCCTTAATCGTCTCCACGGACTCG 205176 32 100.0 35 ................................ GTATATCTCCTTCCTCAGGCGATCCAGGCGGCTTA 205109 32 100.0 35 ................................ TCCGCAGTCGCAGGCGCAAACCCAGGCGGATTCTC 205042 32 100.0 34 ................................ TCCCGGTTGAGGAAGTTAGCGACGAAGCAGTATT 204976 32 100.0 33 ................................ CTTATTTTGACGATGAGGAAACAACGGTAGAAA 204911 32 100.0 34 ................................ TAGCACGTCCGTGTCCTTATGCTTGTCCAGCAAA 204845 32 100.0 37 ................................ AGGATACAAGGATTATCTCACTATAGAGCGTGTGAAT 204776 32 100.0 36 ................................ ATACGTACCTGTTATCTTTTCCCCATTTACATAGGC 204708 32 100.0 34 ................................ GTATTGGATGACGTCATCGCCTTCGCCATTACGT 204642 32 100.0 35 ................................ TCGGATGTTCAGCTGGCACTTACCGCGTTCTTCGA 204575 32 100.0 35 ................................ ACATTTAACCAAATTATTCATTGATTAATCAAGAT 204508 32 100.0 33 ................................ TCCACGACGGGGCCGTCCGCGCTTAAGTACCAA 204443 32 100.0 35 ................................ ATTCCCCTCCCGCGTAAGGCCGCCGCCATTTATGC 204376 32 100.0 34 ................................ AGCTCGGATTCGTACTTTTCCTTAGCGGTCTTAT 204310 32 100.0 38 ................................ TCTCCACAGGAGATGTCAGACCAAGAGGATGACGGGAT 204240 32 100.0 34 ................................ CGTTCTTCATCTCCCTCTAGCCTCCTTGCTTACG 204174 32 93.8 35 ........A.A..................... ATCCCTCCTAATTTGCAACTCCAAAGTAATCTCTT 204107 32 87.5 33 ..........AC............C.C..... ATGATGTACAAGTACAACCAGGGTCAGGACCAC 204042 31 75.0 0 ..........A..C.......ACA.G..C.-. | ========== ====== ====== ====== ================================ ====================================== ================== 20 32 97.8 35 GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Left flank : TGTGGAATCGAGATCCGGAGGACTGGCTGACACGTGATCAGGACAAAATTGTGGATTATATCAAGCAGATGAAAGCCTCGGGCTCGATCGTTATTCTGCATGAGTCTCAAGCAGTAGTAGATTCGCTTCCGGAAATTATCACCTACCTCAAGAATCAGAATTTGAGTATTGTCGGCTTGCGATAAACGGACATTTCATAACAAGGCGATAGACTGGCGGACGCAAGATTCGTAGCCAGGAACAACATCCGATGGTTGAATAAGATGGTTATCCTTTTGGCGGTGGAAACACGGTTTAAAGAGGATAACCTTTTTTAGATCAAGGGGGTCCTGGTGCGAACCCCAAGCGAACATAAAATCCCAGGGAGGTTCGCACCCCGCGTCAGACAAGGGATAACGCGATTTACATGGTAAATTCAGGGTGTTTATAGTAATCTAGAAATGAGGTTCGCACTTTTGACCCGCCAAACCCATGAATCACAAGGCCTTGTCAGGCGGGCT # Right flank : GGATTTAACGAACCGATCTATCCCATTTCTGTTAGATCACCTCCTCCCTCTCCATCGCTACTTATCTCCCACACGCGACCGTTTCCTCTGCCCCTAAAGCTCTCCTGATCCCAGGAGGGCTTTTTTCATTTGTTAACAAATCCCCGCTGTTTCCTCAGAATCTATTCATAAAATTAACCAACTCCTAAAATGCGGATAACATCCAGATTACAATTGAAAATTACAGTAGAGGTATAGACGTCTAGACAATTTCGGTGAAAGGAGAATAACTTGAACAGGTTGCAGGCCAGTCCCAAATACGGACTACTGATTACAGTTCTCATCTGGACCTTGTTTCCGATCTACTGGATGGTGATCGTGGCCACACAGACCGATTTGTTTGCGGATGTGTCGCTATTCCCCCGTTCTGTTACGTGGGAGCATGTGATCAGTGTTTTTACAGAAGAAAATTACTTAGGGGCGTTAATCAACAGCTTTACCGTTACAGCCATCTCCTTGCT # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 212067-211432 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLZ01000007.1 Paenibacillus sp. 7541 contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 212066 32 96.9 33 C............................... CTGATTGAAACAGGAACATAAGTTCGTATATAA 212001 32 100.0 35 ................................ AGAGGCACAGCCGGCAATGAAGGGCAAGGAATTGT 211934 32 100.0 35 ................................ CGGCCACGTCCCATTCCTCATGTTCCGCGTCACGG 211867 32 100.0 39 ................................ AAACTTGAGGACGACAAGGTTATGGGTTTTGTCTCGATG 211796 32 100.0 36 ................................ GCATCATGTAAGTTGTGCTGATTTGGAATTTAGAGC 211728 32 100.0 33 ................................ AATAATGGCGAAATCGTAGGAGCCTTTGCGGTG 211663 32 100.0 36 ................................ GCAGCTTTCACCCTCGTATACCTACTCCCAGATAAC 211595 32 96.9 35 ...............................A GATATATCCGTATTGTGTCCACTGTGCCAGTGCTT 211528 30 84.4 34 .A...........--.......CA........ TCCACTAGTGTATCCGCGGAGATAACCATGATGC 211464 32 71.9 0 ....G.T..CC.A...A..........C.T.C | G [211461] ========== ====== ====== ====== ================================ ======================================= ================== 10 32 95.0 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : GCGGCGGTCAAATTACGACAGAACAAATGCACAAGGCTGTTCGGGATTTCGGTGTTGAACTGCGTGGTGCGGGGACAGACGAGAGCCCTTACGTATATCGAAAGCTTCAGGACGTGCTGGATGCACATGCAGAGACCATCGAAGTCCTGCATGTATTGAAGCCAATCGGTGTGTGCATGGCCGGAGCGGATGAATTCGATCCTTATAAGGATTAAGGGCATGTGGCGAGAAAGCAAACCGGGAAATTCATTATGGATGTCATTGATGTAAAATAAAATGAAATCGAATGAGATTACAGCAGTTTATACCATAATACAGATGAACGGCAGGCCTGGTGCGAACCCCAAGCGAACATGAAATCCCTGGGAGGTTCGCACCTCGCGTCCCACAAGGGCTCCCGGCGATTTAAGTGGAAAATATGCTCATTTTATAGTACTTTAAAAAGAGGTTCGCACTATTGCTCTTATGAAGCGTTGCTGCATAAGGGGTTATAAGGCGGG # Right flank : TCCGCTCCTTCCATCTCCTGAGGCGCACACCATTACAACAATCGGCTCCTGCCCAGGGCCGATTGATTTTTCTAATGTCCCTCCGCTCCAGAGCAAGCGGAGGGCTTTTTGTCTTCCCGAATTCATACACTTCCACTTCTCATCTGTTAATGGAATTCCCCCGCCACCAAAATTGTTTCATTATGCAACAATCATCTATAATCCATTGATCGGTTTTTGCCGATAAAACTCAAGTGAGTAGCAAAAAACAACAAATGGATTTCGGAGGGGTTAGATTGCGCAACAAGAAATGGACAAAATTTTCTTTTAAGGAATGGAACCGATACGGCAACAAGCTCATACTGTCTTTTTTAGTCATTCTGTTAGTGCCAAGCTCGGTGATCGCCTTCACTACCTACACAAGCGTTAAAGGAATGATAGACACACGCTTGCTCGACACGGCTCAGAACAATGTTCAGATGGCGGAGGAATCGATTGACCAGTTTATGTCTGCACAGATG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 222030-221130 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLZ01000007.1 Paenibacillus sp. 7541 contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 222029 32 100.0 34 ................................ ACCTTTACTTGGATCGTTTTATTCATCGATTTTG 221963 32 100.0 37 ................................ CGGTTATGTTTAAGACTCTTGGCCTAACTACTGTACC 221894 32 100.0 37 ................................ GCTGTAACGGTAGTTCGGGTTACCGAAGATGATCACC 221825 32 100.0 36 ................................ GCTTATCGTTGGGATTGAGCGTCACATAAGACATAT 221757 32 100.0 35 ................................ ACAAACACCACTCTATAAAGAGCAATGTTTTTCCT 221690 32 100.0 34 ................................ AAAGTGCAGCTAAACCAGTCTACAAGAGCGATTA 221624 32 100.0 33 ................................ CGTTAACCCTAACGTCATAATCAATCATTCAGC 221559 32 100.0 35 ................................ TCGATGTTTGTTGTGACGTACAATATAAAGTTTTC 221492 32 100.0 33 ................................ CATAACGAGTCGCCCGAGACGATTTTATACGTC 221427 32 100.0 38 ................................ TTGCTCGGTCGTCATGAGATCACCTCATTCACGCTTTA 221357 32 100.0 33 ................................ AACGAGTCGGTAGAATTCATTTTTAACCGAGAC 221292 32 100.0 34 ................................ AATCTAGATCCCAAATCACTCACATCTCTTCCTC 221226 32 100.0 34 ................................ TATAATACCTGTGGTGCTGAGTTTTAATTTGCCA 221160 31 96.9 0 .............-.................. | ========== ====== ====== ====== ================================ ====================================== ================== 14 32 99.8 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : GCGGATACAAAGACAGTGCTGCTGCGGGAGTAGCAGCACTGAAGTGGACCCTGGGCGGCCTTCGAACGAGACGTTCGGGGGCCGCTGTTTTGTATATAAATGATCCGCCTTGAAAATCACTGATGTAGCTGTCAGTGATTTTTCTATATGTTTGTAATAGAAGTCAATAAAGGAAATAGAGGGAGGGTCTTCTTGCAGATGCGATCTTTGTCCAGCTACCCCTGGGCTGGTAAGGGATTGCGAGATTAGCAGTGCCGGAGCGCAGTGAAGGGGTGCGGTGGGCTTGTGACGGACTTCCATGGAAACAGGAAGATCAAATAAAAGGGCCTTGAGTGCGAACCCCAAGCGCACATAAAATCTCTGGGAGGTTCGCACCTGGCGTCCTGCAAGGGTTTTCGGCGATTTGAGTGGAAAATATGCTCAATTTATAGTACTTTAAAAAGAGGTTCGCACTTTGGGCTTTCTGAAGCCTTGCTGCATAAGGCTGTATTAGGCGGGCT # Right flank : AGGCGCCCAGGCAAGCTGCCCACTCGCTTTACGGCGTACTCCATGTGAGTGCATTGAAATTGTGCTCCGGTCCCGAGGCTAACAGGCAATCAAATAAACATGTGTGAATGAAGAATGACGCGAGTTTTGCGTTGTTCTTTTTTTCATGCTTAGTGCGGCTCTAAGAATGCCATGTCTTTTTTTGGTACAATAGAATGGAAGTTATTGGGCGGGGGAGGAGAGAAAGTATGATTTATTTAAGGAGTTTTAAGATTTCCAGTTATACAGATCGAAATCCCAACATATATCCGGATCATGTGTTTAGGCACATCGCTGGCGAGGTGCTCTGGTTTGATCGAATTACGGTGCTGTACGGCAACAATGGCAGCGGCAAATCGACTTTGCTCAATGTCATAGCCAATAAGTTGAATATTAAGGGTGCTGAGAAGATGTCCAGTCATGGGCACAGTATCTATGTTCAGCGGTTTCTTGAGATGAGCAGCTGCCAGTTCGGACAGGAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //