Array 1 25421-23668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUG010000197.1 Limosilactobacillus reuteri strain MR2 scaffold197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25420 36 100.0 30 .................................... AACAGCTTCGTCAAGATTCTTGGAGTTAGT 25354 36 100.0 30 .................................... AGAGTGCGTAATAGCTCACTAGTCGAGTGA 25288 36 100.0 30 .................................... CAACGTACAAAAGGGGATTTAAACAATTTA 25222 36 100.0 30 .................................... TAGATATGACACTGCAAGGACTATCACCAG 25156 36 100.0 30 .................................... CAACCATTACGACTGCAATTAAAGGGACTG 25090 36 100.0 30 .................................... CCTTGACGCTTTTAACAGTTCAAATGGAGC 25024 36 100.0 30 .................................... TTGAGCTTAGCATTTTGGCGGCGTAAATAT 24958 36 100.0 30 .................................... AAGTTCATTTTATTCTTCAAGGCGCTATCA 24892 36 100.0 30 .................................... TGAACGATTTGTTGAAGAACTTAAACAGCA 24826 36 100.0 30 .................................... AAATAATAAACACCGATAACATCTGCACCA 24760 36 100.0 30 .................................... GACGAATTTACAGACAATTAAAACAGACGT 24694 36 100.0 30 .................................... AAGAACAACCGAAGGGCGTTAGTTCTTTAC 24628 36 100.0 30 .................................... CCATACAAGGTTGATGCAGATAGAAACTTG 24562 36 100.0 31 .................................... AATGATTGTCAAACCGACGATCTAATCCGGT 24495 36 100.0 30 .................................... GAATCTATTACCCGTGACTTTGCCAACTTC 24429 36 100.0 30 .................................... TTTTGTTTGGCGTAACTGTAATGGTCATTT 24363 36 100.0 30 .................................... TTTATATTCCATTTACTTGCTACATTATCA 24297 36 100.0 30 .................................... TGGTGATATGCGTACTCATGAATGCTGGCA 24231 36 100.0 30 .................................... TAGATTGGCGCTACCAAGCCTACGAAATCA 24165 36 100.0 30 .................................... ACGATACAAGCGAAGAATTATATCATGAGC 24099 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 24033 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 23967 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 23901 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 23835 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 23769 36 100.0 30 .................................... ACGATACAAGCGAAGAATTATATCATGAGC 23703 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTTTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTACGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //