Array 1 1134549-1141348 **** Predicted by CRISPRDetect 2.4 *** >NC_007498.2 Syntrophotalea carbinolica DSM 2380, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1134549 29 96.6 33 ............................A GTCCGCCAGTCGTTGAACACCCGGCGACAAACA 1134611 29 96.6 32 ............................T TTCCCGCGTGTCCCTGAGCTTGTTAAGCTTGC 1134672 29 100.0 32 ............................. CATTACGAGTGGGGAACCGAAAGCGTCAAGTT 1134733 29 100.0 32 ............................. TTTGGTAGGACGTGGCATGCTCAATAGGTGGG 1134794 29 100.0 32 ............................. TCGGCAGCGGCACCGGAAACGATGTGCTGTAA 1134855 29 100.0 32 ............................. TTCTGTTTTGCTCATGCTGCCTCCCTTATCGC 1134916 29 100.0 32 ............................. CCTGCCAAGGGTGGTTATTTTCTCGATGAAAT 1134977 29 100.0 32 ............................. GCCTGTTTGCCCTGATTTCCTCGGTGACTACG 1135038 29 100.0 32 ............................. TATCGCTTCGAGCATCATGTAAATCGCCTTTT 1135099 29 100.0 32 ............................. ATGGACGAGAACTACAACCTGACATACGAGGT 1135160 29 100.0 32 ............................. TTTTTCGACCATCTCGTCTTCGAGCTTTACGC 1135221 29 100.0 32 ............................. TGCCTTTATTTCGTTGCGGCAAACTTCTACGT 1135282 29 100.0 32 ............................. GTTGGGCCTGTTACAGCCGAATGGATTAACCG 1135343 29 100.0 32 ............................. GAAAATAGATGGCAACAAAAGTAGGAAATTTA 1135404 29 100.0 32 ............................. TGGAAATGATTGGAGAAGAGCAACACCCAATA 1135465 29 100.0 32 ............................. AGCACCCGGCAAATGTGGAAATGCACGTTGAC 1135526 29 100.0 32 ............................. GTGCTATCGTCTTTCATTCCCCACCTCCATAC 1135587 29 100.0 32 ............................. TTGTACGGTGCTTCTGTAATGCCCTGACCAAG 1135648 29 100.0 32 ............................. GAGAACTCGCCAAGGATGTCAACAGCGTTGTC 1135709 29 100.0 32 ............................. GTTATTACCGTCTCCCCGTCCACGCTGAAACA 1135770 29 100.0 32 ............................. GAACAGATCCTCCACCTGCTGGCGCTCGCTGT 1135831 29 100.0 32 ............................. AAGTTGAACACTCCAACAAAAAGAAAAGGCCA 1135892 29 100.0 32 ............................. GTTTGGCTATGCCGATGCTGAAGTGAGCGTAA 1135953 29 100.0 32 ............................. CTCGATCACGCCGCGCCTGTAAATCGTTCAGT 1136014 29 100.0 32 ............................. TATATCCCGAATCCGTGGTTGACAATGGTGAT 1136075 29 100.0 32 ............................. GGGAGGATTTTGATGAACTGATACGCCAGCAC 1136136 29 100.0 32 ............................. GACGACAACACGCCGTTTCCGACGTTGCCCGG 1136197 29 100.0 32 ............................. GCAGCCGTGCCGTTTTCCTTACCAACATTATT 1136258 29 100.0 32 ............................. CTTTTTGATGTCGTCAATCTTGGGGTTGAAAC 1136319 29 100.0 32 ............................. GATTGGGGCTGGCCGAAAAGCGGAAAGCTCAG 1136380 29 100.0 32 ............................. ATAGACGACAACCAGGTGTTGTTGTTTGAGAG 1136441 29 100.0 32 ............................. GCGGATGGAAAAGTCTTTACGCTCGACCTGTT 1136502 29 100.0 32 ............................. GGCATCTCTGCGAAAAATCATAGGGTGACAAT 1136563 29 96.6 32 ............................T GTTGAAGATGGGATCAATTTTTTGTTTCGGGC 1136624 29 100.0 32 ............................. CTGGCGCAGTTGTTTCCACTGACCCAGCACCA 1136685 29 100.0 32 ............................. ATATGGTTATAACAAAAAACAAATCATGGAAG 1136746 29 100.0 32 ............................. CCGCTTGACTTCCACCGATGCCAAGACTGTGC 1136807 29 100.0 32 ............................. GAGGGTTACACATGAGGGCAATGTTTCAAGGA 1136868 29 100.0 32 ............................. TGTGATGTTTCAGGGACGCTCTCTTAATTTTT 1136929 29 100.0 32 ............................. CCCTTAAAGTCACCATACTGTAAGTCATACAT 1136990 29 100.0 32 ............................. TTTGAGCCGCTTATCGGTGATCCTGGTGATGG 1137051 29 100.0 32 ............................. GTTTCGTGCAGCGTTGCTTCGCTCGGATATCC 1137112 29 100.0 32 ............................. GGAGGCTCGCCTTGACCTTTCAGTTTTTCAAC 1137173 29 100.0 32 ............................. AGTGTGCGGTGGGTGAAGCGCCAGTGGCCGGA 1137234 29 100.0 32 ............................. TAACAGTAGTAGGTTCAACAGGAGGTGCAGTA 1137295 29 100.0 32 ............................. ATCGCCGCTCTTAATGCAGCACTGGAAGACGA 1137356 29 100.0 32 ............................. ACTCTTGAAAAAATCGCTACGTGGTTACAACA 1137417 29 100.0 32 ............................. TTGATACGTCTGGTGGGCCGGTGTCCTGGCTG 1137478 29 100.0 32 ............................. GCTCGATCATTATTCGCTAGACTACATGCTAA 1137539 29 100.0 32 ............................. ACGTTTAGCCAACGGTGGCTTGGTGGACGTGG 1137600 29 100.0 32 ............................. ATGCGGTTTGCCACCGGGTCTATAACGCCTAA 1137661 29 100.0 32 ............................. GCGACCAATACCGCCACGTAAATGTGGTTCCA 1137722 29 100.0 32 ............................. GCCGTTGCCAAACTCTTTAACGATTTTCACAG 1137783 29 100.0 32 ............................. GCGCGGCTGTTATGTCCACCGCCGGTTCTGCC 1137844 29 100.0 32 ............................. GTCATGAAGACGGTCGGCGATACGTCAGCCAG 1137905 29 100.0 32 ............................. GGGGAACGGATACCCGACATGCTACAAAATCG 1137966 29 100.0 32 ............................. CTCGGCCTGTACAGCTGCCTGCACGGATGCAG 1138027 29 100.0 32 ............................. TGGGCTATGGTTCATCCAGATGTTTCCTGGAT 1138088 29 100.0 32 ............................. CTCGAACACATGAAAATTCTTGAGGTGTGCAA 1138149 29 100.0 32 ............................. AAAGGATAAAGTCATGGGGCTTACTGGAGACG 1138210 29 100.0 32 ............................. ATGTACGGGTCGGTGCATCGCATGGAAGAAAT 1138271 29 100.0 32 ............................. ATGCTTCTTGCAGCTGCACATGCCAGAGAGCC 1138332 29 100.0 32 ............................. CATCCCCGTCTTCCGTGATTGCTGATCGAGTG 1138393 29 100.0 32 ............................. GCCGTACGTCCATTACCGACCATGCTCTGGAA 1138454 29 100.0 32 ............................. CCACCTTGCTCAATGCGGCCTCCGAGGTCGGA 1138515 29 100.0 32 ............................. TGCATATATCCCACATGACATGATCTTCAAAA 1138576 29 100.0 32 ............................. TTTTGGTTTTAGACACCGGTGGATCGGCTAGA 1138637 29 100.0 32 ............................. ATGCGCGAGGCGATCGAGGAGGCAGAGGCGGC 1138698 29 100.0 32 ............................. ATGCGCGAGGCGATCGAGGAGGCAGAGGCGGC 1138759 29 100.0 32 ............................. AAACAGGCCACAGCCAAGGGGGTGCGCCTATT 1138820 29 100.0 32 ............................. TTAACATAATAACTTGCCCGTCAACACATTGA 1138881 29 100.0 32 ............................. ACCGACTTCCTTGCGGGAAAACTCGGACGGAT 1138942 29 100.0 31 ............................. TTCGCTTTCCATCCTTGTCAACAACGCCATC 1139002 29 100.0 32 ............................. GTCCGCGTCATCTCCACCCACGACGGCGTGGC 1139063 29 100.0 32 ............................. TTTCAGGTCGAGTTGCGCAATCTTCCCTTCGC 1139124 29 100.0 32 ............................. ATGCCGCCTTTCTGGTTGAGGGCATAGCTGAC 1139185 29 96.6 32 ............................C CTCCATTCCTACCGTTAATCGTTCTCTTCGGC 1139246 29 100.0 32 ............................. GCGGACGCACCGTCGCGTTTGAACACAACCCC 1139307 29 100.0 32 ............................. CCTTCGCGCTACGGAATGATGCAACCAGGTGG 1139368 29 100.0 32 ............................. GGAGGTAATGTCGATGCCCTGCGAAAAGTCGC 1139429 29 100.0 32 ............................. TCGGGTCGGCTTGGGTGGACGAATCCTCCGAC 1139490 29 96.6 32 ............................A GCCCTTGACCTGATCAAACCCTATAAAAAAGA 1139551 29 100.0 32 ............................. GGTATTGAGACATGGTGACCCTTTGATTGGTA 1139612 29 100.0 32 ............................. ATGCTTCTTGCAGCTGCACATGCCAGAGAGCC 1139673 29 100.0 32 ............................. CCGCACCGTGGTGGGAACAGAATAGGCACGAA 1139734 29 100.0 32 ............................. GGGCAGTGGATGATGTTGACGAGTTGGCTGAA 1139795 29 100.0 32 ............................. TCACCAACATAGGGGGGTATCTTTTCCCAAGC 1139856 29 100.0 32 ............................. TCGCGCATGGCCGTAGCTTCCTTGGCGACGTA 1139917 29 100.0 32 ............................. CCGTGAGGCGGGTCGTGGAGGCCAAGGGCAAG 1139978 29 100.0 32 ............................. CGGCAGGCTGAGCAGTTGGGCATACCTGAGAG 1140039 29 100.0 32 ............................. GGTTTTGGGTTCAGCCTTATACCCAGTGCGAA 1140100 29 100.0 32 ............................. GAGGGATTACACGTGGACACTATATCTGTATC 1140161 29 100.0 32 ............................. GCGCGGTAAAGGATCTTCGCTTCTTCAACCGT 1140222 29 100.0 32 ............................. GGCCATTTGTCTTTCTCCTTTTTGTTTGAGTG 1140283 29 100.0 32 ............................. TTTCGTCAACATTTTAACCATGGAACACCTGA 1140344 29 100.0 32 ............................. GAAACGGCCAGCATCTTCCGGGTGGTGGCTCA 1140405 29 100.0 32 ............................. CCGCTTACCATCCACATGATGAACAATTATCT 1140466 29 100.0 32 ............................. GCATAACCCGCACCATTACGGATTACACCTTG 1140527 29 100.0 32 ............................. ATGTATCTGAGAGACACAGGTTTTCACAGGCT 1140588 29 100.0 32 ............................. GAGAGAGGAAACTATGCCCGACGAAACAACCA 1140649 29 100.0 32 ............................. TGTAGGGGATATTTCCGAATTGCTTATCAACA 1140710 29 100.0 32 ............................. GGTTCACGGCATTACACACGACGGCAATGAAA 1140771 29 96.6 32 .............G............... TTGTCTTGAATGGATTGCTAATCTGATAGGCG 1140832 29 100.0 32 ............................. GCCTTTGATGCGGCACCGTCGGTCTGGGCCAA 1140893 29 96.6 32 .............G............... GTACGGCGCACCTTTGTTCAGAAATACACCAA 1140954 29 93.1 32 .......T.....G............... GAGCCTGCAGAGTTTGTTTGTCACGGAGCTAG 1141015 29 96.6 32 .............G............... ATCGCGATTGAGTTTGATACGGATCGGCTTGG 1141076 29 93.1 32 .............GC.............. AATGGATCGATAACGTACCGGTCAACGACATT 1141137 29 96.6 32 ................T............ CTGGTCGGAGACGGACACCGGGCAGTCAAGAG 1141198 29 93.1 32 .............G.......G....... TGGTTGACCTGGTTGAGGTTAGCGTTGATACT 1141259 29 86.2 32 .T.G.........G.............G. CCGCCGGCCAAAAGGCGTTTGCCCTCATGTAT 1141320 29 82.8 0 .T.G.........G.............GA | ========== ====== ====== ====== ============================= ================================= ================== 112 29 99.3 32 GAGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : GCTATTAAACCGCATCATTCCAACCATCGAGCAGGTGTTGACGGCGGGCGAGATGCAGGTGCCGAAGGCTCATGAAGAGGCGGTTGACATAGCCATTCCAAACAAGGAGGAGATAGGCGATGCTGGTCATCGTGGTTGAAAACGCCCCGCCTCGATTGCGAGGGCGCTTGGCTTTATGGTTACTCGAAGTTCGGGCCGGTGTTTATGTGGGCAAAGTGTCCCGGCGCATTCGAGATATGATTTGGGATAATGTGGAAAAGGGGATAGATGACGGCAATGCCGTGATGGTCTGGAGCACCAATACCGAATCCGGCTTCGATTTTGTGACCCTCGGTGCGAATCGGCGTATTCCCAAAGAAATGGAAGGTATTAAATTGGTGTCGTTTCTCCCGGAAATCTCTTCCGGATACTCTCCGGATTTTGAATAAATTTTGATCAGATTTTTTGGTGCAGTTTTTCGGTCTTTGAAAACCTAATATTTTCATGTGCTTAAAAATAGT # Right flank : ATTGCTGCCCGGTGAACAACTGGCCACCGAATTGGCCTACGGCAGCGCTTTGGTGACGATATCACCATGGATAGCGCCTGCCTGCGGATGCGTTATCTGTCCCAAGCCGTCTCTGGTGGTGCCACCTTGTACCCCAACCTGTTTCGGAGATTACCCTCGGTACCAGTCTCTTTATGTCTATCTTAAAAATATTGCCCATTTCATTTGCGCAAAATAATGTGTATACCCTTTCGAATTGTTGAGTTCTGGTCTTAAAAGTCGTACCATCAGTTACACTCTTTAACATAGGGCAAAACTGGAGTAATCCAGTGACGCAAAGCCACGGGTCCTTGCCGAGGATAGCCGGGTTGCTGAAGACGCGATTGTTACTCAATTTACGGCCGTATTTTTAGACCTGTAAAGCAGTCCACCTCTTGCCCGGAGGTGGATTTTTTTATTTGCTGACTGCCCGGTTCAATCGAAACAAGGATGGGAGAGCCAACGGACCTTTTTTATTATAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //