Array 1 21292-22338 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNV01000043.1 Pseudomonas aeruginosa strain PAE006 NODE_43_length_30674_cov_25.695453, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 21292 27 100.0 33 ........................... TGAAATCATTGTCGCTCACCGCCAACACCTGGC 21352 27 100.0 34 ........................... TCCCCACGGCCTGCCCTTCGCCAGCCCCCATTGG 21413 27 100.0 33 ........................... TGACTTGGCGAGTGGCAAATTACCGCGTTTTTC 21473 27 100.0 33 ........................... TCAGTGCCCTGTGCACCACCTTGGGAAGTAAAG 21533 27 100.0 33 ........................... TCAGGCCTCCACCGCCTCCTTGCCGCCGGCGGC 21593 27 100.0 33 ........................... TCCCAAGGTTGCTTGAACAACGGCCTCGATGCG 21653 27 100.0 33 ........................... TCGTTACAAAGCCAACGGGCGGGCGCTACTGCC 21713 27 100.0 33 ........................... TTAGCCCTGCACTATGAACGTGCGCAGCGTGCG 21773 27 100.0 33 ........................... TGCTGGCGTGGACAAACACTCGGTTCCAGTTGT 21833 27 100.0 34 ........................... TGATCGGCCGGCCTGGCAATTGACAGCGATATTT 21894 27 100.0 33 ........................... GAGGCTGGCTGCCAAGGGCAAAGCTATCCATTC 21954 27 100.0 33 ........................... GTGCGATAGTCAGCGCACTGACGATTGCAAGCA 22014 27 92.6 31 ...........C.............G. CTGCGGAATCGTTGAAGACGGCTGCGAAACT 22072 27 85.2 33 .......A....A.G..C......... GTACGATCTCGGGAATTTGCGTATCTGGGATAC 22132 27 85.2 32 A...........C....C.....T... AACCAGTGGGGCATCGTCATCGGACGGCTTTT A [22154] 22192 27 88.9 33 ..A.........C...........T.. GCATAAGCAGGAAATGGGAGGTGAGCCCTGTTT 22252 27 81.5 31 ..A........C.....C..T.....A TAATCGACCGATCTAGGGGCAGACGGGCTAG GG [22275] 22312 27 85.2 0 .......C.T.......C..T...... | ========== ====== ====== ====== =========================== ================================== ================== 18 27 95.5 33 GTGTGCCGCCGTGTAGGTGGCTTGAAG # Left flank : TCAAAGACGCTTGCGTCATGCCGACAGCTTTTCGCAGTGCCGCGCTCGGCGACGACAGGGCCGAATTTAGGGCCAAGTGCATTGCTGTCTTCGATAAATACCGGGTTTTGGAAACCATGATCGAAACAATTAAGGACGCTTGTGATTGTCATCGCCGTTGATGAGAGCCAAAAGCGTTCGCTGAGGAGATCCAGGCGAGTGTTATCCAAATGGCTCAGCCAAATAGGCTCTCGCACATGGACTGGGAGCCTAAGCCAAGAGGGTATCCAGCAGATGCGCAGCGAGCTTGCAAAGGCAGCGAGTAAAACCAGTGCTGTGGCCGTTTTTGCTGTGCGATCAGGGCGCAGAATGACTCTTTTGTTCTTCTGTGGTGCTCGAACCGATTGGGATGAAAATGGCTGGTTTTCTCATAAATCTATCAGCGCAAAATGCCTCATTGATAGTGACTATTTATTGAAGCAAGTGATTGAAAAATAGAAAGTAATCGCGGATTTATAACA # Right flank : GGCGTATGTTTCGAGTAGCCCAATAAGCTCGAGTCAGCGCCGTTTTTTGGGGTTCAACAGTGTTGCGCGATAAGCCTCGCCCTTCAGGGCAGTGAGGATGTCAACGATACAAAGAATTACTGACCAATAAACACCGCTTCAACTGCCGCCAAGGCTTGGCGCGCGCCTTCAAGCTCCGGCTGAATCAGTTTTAACCCTCCCAGATCGTTGTTCATTACCGACACGCAATCTTGAAGCGCTTTTTGGGCTTCAGCGAGAGCAGCCAGCAGAGCTTCGTTTTTGCGATCCACAGCCGCTGGCGCTCCGTCTACTACGCTGAGGCGCTTGCTGAGAACGAAGTAGATGTGCGGGAACACCAACTCTGAGACAACGCCCGCGTTCTTCGCTGTTTTTGCTGACGCCTCTTCAACGATAGAGATCAGTTCTGCCTTGTGGATCGGGTTGAATAGCTGCATGTGGTGGCTCCCAGTGATTAATGCTCCCAGGATGCCGACCATCCC # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGCCGCCGTGTAGGTGGCTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //