Array 1 143581-142392 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV826879.1 Aerococcus sp. HMSC035B07 Scaffold90, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 143580 29 100.0 32 ............................. ATCAAAATTGAAAAGGAAGTCGCAAAAGAGCA 143519 29 100.0 32 ............................. GGCCCAACTATTAGCTAATTGTTGTTGTAACA 143458 29 100.0 33 ............................. GATAAAGACAGATTATAAGCCAGAAGCAGGAGA 143396 29 100.0 32 ............................. GGTTTTGACTAGCGGCTTAATGGCTTCCTCAT 143335 29 96.6 32 ............................C TTTAGGGACGTTTGGACAACCAACAAACCTTA 143274 29 96.6 32 ............................C AGGAACGAACCGTGACAGTAGCCGAAATGCAA 143213 29 100.0 32 ............................. TCCTCAATTTCTGTTAAAATTTCAACGCTTGT 143152 29 96.6 32 ............................C AGACTATAGCTCAGTGGGAAGCATACAGGGTG 143091 29 100.0 32 ............................. TAGCTTGTAGCGGCGTTTTAGCGCCTTCTCAT 143030 29 100.0 32 ............................. TAAAGATTTTAGGAGTCACATCGTTATGACCA 142969 29 100.0 32 ............................. GAAGTCCTCATCGATGGTGTGGTTTACGTCAA 142908 29 100.0 32 ............................. CCACCGTGACAAAAGATGGGACATACAATTCC 142847 29 100.0 32 ............................. GAATAATTTTTTAACCCTGGTGGTGCTTTTGG 142786 29 100.0 32 ............................. CAGATGACACCTAGTGAGTCGACCTATGCGGC 142725 29 96.6 32 ............................C TGCTTATCTCTACCACCTTAAAACCTGCGAGC 142664 29 100.0 32 ............................. CTCATCGATATTGCAACCATCCACGACGAGGA 142603 29 96.6 32 ............................C ATCACGGTTGATGTCCCACTCGCCGGTCCCCT 142542 29 96.6 32 ............................C ATACGTTCACGCTGAATCTTCTTCCACTGCAT 142481 29 100.0 32 ............................. GGAACAAAAATTACCTGAATTAAAAGGAACCC 142420 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 20 29 99.0 32 CTTCTTCCCGCACATGCGGGGGTGATCCT # Left flank : ATTATCCAACAAATCATTCGCTTTGGCTTGATCGGTGTCCTTGCCACAGTGATCGACTTCGCCCTATTAACGGGCCTTACTGAATGGGGCCATGTCCACTACTTGCTGTCAGCGGGGATTGCCTTTGTTGTCGCTACGATTTTTAATTATCTTGCCAGCATGCGCTATGTTTTTGTGAGTCGTTTTTCTAAGGAAGAGCGGGTCCAGGAATTGCTCTTGTTTGTCAGTCTGTCAGTGGTAGGCCTGATCCTCAACCAGTTCTTTATGTGGGCCTTCGTTGAAAAACTCGGCATCTTTTACCTCCTAGCCAAAGTCCTAGCTACCTTCCTTGTGATGGCGTGGAACTTTATCTCAAGAAAATTATGGATTGAATAAGGCATGAGGTTATCACTGGTTAAAGTGACTAAGATGGCTTATAGTAACTATGGGGGATTTTTTAAAGTGAACGAAAATGGCCGAGGGATCAAAAAAGAAGCCTGATTTGATGGGCTTTCTTTAGT # Right flank : GGACAGTGAAGGCCTAACGATAACGAATACCTCTTCTTTCCGCATACGCGGTACACGCAAACTTAAAGCAAGACAAAAAGAAAAAGCCAGAAAGAATATTTCTTCCTGGCTTATGTTCATTATAGGCTAGATTATTTAAGGTGCCTTGCTTTCTAGATCAGAAATTCGTTGTTCGAGCGATGAGATTTCTTCATGCATACTTGAGATTTCCTCGGTCATTTCATCGATGGTATTAGGGGGAATTTCTTCTTGGCGTGGATTGTTTTCGATAACGAGCCAAGCAATAAAGAAGATGGCAGTCACTGCAAGAATGACATAGATCCAATTGAGTTTGGGTGAGCCGTGGTCTAATTGCTCGAGGGCTTCATCGACGGTCAGGTTCTCCAAACGTTTCCGTTCACGTTCACTGAGATTTTCCAAATCCTTTAAGCGATAATATAATTTTTGGCGTTTCGCTTTTTTAGTCATTTTTGTCCATCCTTTTTACTAGCCTTGATTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTTCCCGCACATGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTTCCCGCACATGCGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 88396-88062 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV826908.1 Aerococcus sp. HMSC035B07 Scaffold787, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 88395 29 100.0 32 ............................. AATGGCAAACGCTATGATTACACAGTTCCAAA 88334 29 96.6 32 ............................T CGCATAATCCCATTAATTTCTTTGTACGTTTC 88273 29 100.0 32 ............................. GCAAGAAAAGCGATTGAGCGTGTAGGCGAGGA 88212 29 96.6 32 ............................T CAAGGAGAGCCTTGCAGGCGGTTCAGCGCCTA 88151 29 100.0 32 ............................. ACGCCAGGCGGCAATACGCCAGCTGGCAAGAT 88090 29 89.7 0 .................A........T.T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.2 32 CTTCTTCCCGCACATGCGGGGGTGATCCC # Left flank : GATCCTAAAAAAGATCAGATGATCGAAATAGGTGCTCTAAAGATAGAGGGGGCAGAAGAGAATGTCTTTCATTCTTTGATCGCTAATAAGAAAATCCCTGAGCAAATTCAAAAACTAACAGGGATTAGCCAGAAAGACTTAGATGAAGACGGTAAGGATGAATCGCAAGTGCTTGCAAATCTTCTTGAATTTATTGAAGGTCAAGTTATTGTCGGTTACAATATCAATTTTGATATTAGTTTTATTAATGAGCAATTGAAAAATATGGGACAGGAGAATTTATCTAATCCAATTCTTGATTTAAAAACTATTATCAAAAAGGAGAAGATGTTCCTAAAAAATTATCAATTGCAAACAGTTATAGCGAGTTACGGGATCAATAAAAAAGTCCCCCACCGAGCCTTGGAGGATGTTAGATTAATGGCTGAGCTCATTTCCAAAGTGAATAAATTTCCAGCTTACTTAAAAAAGAAAGCCCGGTAATATAGGGATCCTTTAGT # Right flank : GTGATTCGCTATTGGATCAGTCTACTATCACACCTCTTCCCGCTCACGCGGATTTTATTTTATAAATTTTTCATCTACATTTTTGAGAATCGGTGCTAAGTAAATCCTTCTTGATGTATTGCTATTGTGTTCTAAATGAATTACAATATAGACGAAGGGGCTGGTAAATATGTCAAAAAAAGCGAGTATATCAATCAGAATAGATGAAGATTTAAAGAAGAGTACCCAGGACATATTAGATGACTTAGGGCTCGACATGACTACGGCTATCACGATGTACCTAAAAAAAATAAATGCATGTCAAGGGATCCCCTTTTCTGTAAGGAGAACTAGTATACAAGAGGCCTTAGCAGAAGTTGAACTCGGAGAGGTGGAAAGTTTTGATAATGTAGAGGAGTTTAAAGAGTGGATGAAAGAACTTTAAGGATTGAATTATCAAGAAAGTTTGTACGAGCTCTTAAGAAATATAAGAAAAAACATTACAATATAAATAAGTTAGA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTTCCCGCACATGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTTCCCGCACATGCGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //