Array 1 1775336-1775002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1775335 37 100.0 35 ..................................... TCGGCCTTGCTCCGGCACCAGTTCTCGTTCCCGGA 1775263 37 100.0 39 ..................................... CGGGGTCGGCGGCGCTCGCCGCCGGCGTCAGCGCCGAGG 1775187 37 100.0 37 ..................................... CCAGCCATCAGGCCTATGACTTCGCGCAACTTCACCT 1775113 37 100.0 37 ..................................... ACCAAATAACACTAGACATTTTTCCTCCTGTAGTAAT 1775039 37 73.0 0 ..............T.......GG..CT.CC...CTT | T [1775033] ========== ====== ====== ====== ===================================== ======================================= ================== 5 37 94.6 37 GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Left flank : TCCTGCGCTCTCGCCTGGCCTACCCCGTGGCTACACCGGGGTTAACTCCGTGCGTTACCCTTGCTGCTGGCAGCTAGGGATGAGACAGTTCCCCGAGCACCGATTCGTAGAGCCCCGCACCTAGTGCGGGGTTTCTTCGTCCTTCAAATGAAGGGATGTCTACGGTGCTGCGTCTATGCTTGAGGACGGGGCCTGTGCCGGGGGATCTGGTGAGGGAGGGGGTGCGCGTGCGGGTGCTCGCAGGGTTGAGGCAGATCGAATCTGTGACATTGGTCACCATCAGTGTGGTGTGGGACACCCCGTCTGACTGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCTCCCGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAGGTGGTAAAAATGGACCCGTTCCAGCCACCTCCGGAAGGGCCTCCACAGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAACCACGCGGCTCCCAGGAGCAGG # Right flank : TTTTCTACGCGAATCCGAATAGGTTTATACGGCGCCCTGCGTAGTCTGCCGACTGTCTGCCGACCCGGTTCGTGTGCGTGTCGCAATCTGAGGATCAGAACGAGGGACACCCTTGACCGCGTCAGGGTCCGGGCTCCTGACCTGCGTGGACATTGGGTGTACAAAGGTGAGAACGGGGTGGGGTCAGCTCTGATCCTCAGATTGCGACAGAACCGTCCGCCCACCACCGCCGCGGCCGTGATAACCGCCGCGTATAGCCTCCTCCCGGGGCGATACAGGCCGCCCGCTGCGACCAGGGCCATCCGCGCGCCAGCCGAAGCAGCTCCCCGGGCGCCGACTCGTAGGCCCCCGCAGGCGGAGGGGGACTCTTCCGCAATTGCCGGACTTAACGCGAAATGCCAGGACGTAGGCCCCCGCAGGGCCTCTTCGTCCTGAGGCGGTGGCGTCACACGTGGGGGAGAGCGGCGTCGGCCTACCATCGTGCCGGGTGCTCCCCGCCG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 2 1897811-1898139 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1897811 37 100.0 35 ..................................... CTGATGTTTCTGTCGCGTTGGGCATTGATCTTCTC 1897883 37 100.0 38 ..................................... GTACTTGTAGACGGGGACAAACCGGGGCTTGCGCCCCG 1897958 37 100.0 35 ..................................... CAGAACCCAACGGCCTGCCAAAATGACAGGTGAGG 1898030 37 100.0 35 ..................................... CAGGTGAACTTGGACAGCTCCTCGTACTGCGAGGG 1898102 36 81.1 0 ......................A....-T...CT.GG | T,G [1898105,1898124] ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 96.2 36 GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGAC # Left flank : CGACTCACGGCCGAGGAGGTGTCCGAGGGCTGCGACTTTCGTGATAGATGGCGCCCTCTTTCCCTGAATCGCCTTCCCGATGGAGATCTCGTCCGGGTTTGCCGGAATGGTCGGAGGATCGCGTTCGTTCCGGTCGGGGCTCGGGGCCGGGCTCGTTTGGGCCCGGGTGTCCACGTCGGGTCCGGTCGGTGTGCAGGGGTGTCCTCGGCGGGGCCGACCCGGTTGGTGCTGGAGGTGCTGTTGTGGCTGGTGGGGCGGTATAGTGAACAGGGTGTCATGTTACATGTTTGCAAGATGGTGCTCCGACACCGACTTTTCCGCATGACCTGGTTGAAAGTTGGCGCGCGGAGGGCTCTGAGGGCCGTCGATGGCGCTTGGCGTGATTCCGCCACTATGTGCTAGTCTGAGCCCGGTGCTGGCCGGTCCGCAGGGGTGCTCCCGGGGCCGGTGGCGCTCCGGGCCCTCGAAGTGGCGTCATACCGCCACTCTCGGAGGCAGGG # Right flank : GGGCGTCTGGGTATGTCGAGTCCTCCTCATCGGGGAAGGGTTCCGGGGCGGGGTCGGTGGGGAGGGCACATTCTGCGTCCGGTTCGCCAGCCCCTGCCCGTCATCCTCCGCGAACGCGCACCTCCCATCTGCGCGTTTGACTGGAGACCTGCGCGCTCGCGGAGAACCGGGGGACTCCCGGCGGGGCCGTCCAGGCGGGCGCCGGACCCGCCGCCCACTGAATAACCTTCACTGACACAGCCGGTCCCTGAGGCGGAACGATCCGCTGCGTCGAATTCGGGCGAGGACGGTGAGGTCCTCGCCCTTCTTGCTGCTCGGCCGCGAATACCATCGCGAGCCGCACGGTCTCCCGGCCGCACGAGGACGACGGTCATCGAGCGGCGATCAGCGCGCCATCCGTGTCGGGTCATTAAGCCTTTCTCATCAGAAGCGGTGGCTTGGAGGCCGGAGTCGGCGCGATGACGCACGATCGTGGTGGGGCGTGTGAGGCTCCCGGGGCT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCACGCACCTGTAGGTGCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 2158157-2159527 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2158157 28 96.4 33 ............C............... CGGCCTTGTCCTGCGGAACACTCTGGGTGGCGG 2158218 28 96.4 33 ............C............... CAATGCGGCGATAATCAGGTGGTCCTCGTCCCG 2158279 28 96.4 33 ............C............... TTCTCTGTGATAAAAACCTCCTTCCCATCCTTG 2158340 28 96.4 33 ............C............... GATTTCCGGCTGGTTTTTCTTTCGGCAATACAG 2158401 28 96.4 33 ............C............... CTCCGCGTCAAACGTGTACACAACCCTCATGAC 2158462 28 96.4 33 ............C............... CTTCCTCCTCGAGCTGCGCGATACGAGCGTCAA 2158523 28 96.4 33 ............C............... CTGTTCCCCAGGATCGCCGCGTCGTAGGCGGCG 2158584 28 96.4 34 ............C............... GCCGTCAGTTCACCCACCTTGAACGCGACCTCGC 2158646 28 96.4 33 ............C............... CGGGATCCAGGTCCGGGTCACGGGAGGTCCCGG 2158707 28 96.4 33 ............C............... CAGGGCGGCGCTACGGGTGGGGTCCATACGGTC 2158768 28 96.4 33 ............C............... CCGCGTGAGCACGATCCTGCGGCTGGACACCCC 2158829 28 100.0 33 ............................ GCTCTACCTGAATTCGTTGTACGGGAAGTTCGG 2158890 28 100.0 33 ............................ CGGCGGTGCCGGGCGTCCAGACGGCGTAGGAGA 2158951 28 100.0 33 ............................ GAAGGCGGAGCCGGTGGAACCGGGCTCCCGGGT 2159012 28 100.0 33 ............................ GACCGGTGGCCTGGGGCTGATGGTGATCATCGT 2159073 28 100.0 33 ............................ GCCGCCCTCGGACGGGGGGTGCTGACCATGGGG 2159134 28 100.0 33 ............................ CATGTTCGTCGCGTCGTACCGGGACCCGTTGAA 2159195 28 100.0 33 ............................ CGGTTTGACGGTGGGGGCCCAGTTCAGGGGGTC 2159256 28 100.0 33 ............................ CAGCGCGAACACGGTCCAGGAGGAGGTGGACAC 2159317 28 100.0 33 ............................ CTTGATGGTCTTGGGGGCCTTGATGATGTCGGT 2159378 28 100.0 33 ............................ GTCGTCCTGGCTGGCGCCCATGAGTATCAGGGC 2159439 28 100.0 33 ............................ TCATTCCTGTGATCTGCGACACGGTAAAGGGGA 2159500 28 78.6 0 .....G................ACC.AA | ========== ====== ====== ====== ============================ ================================== ================== 23 28 97.3 33 GACAGCTCCGCGTATACGGAGATTAAGG # Left flank : AAGGGCGCGCAGAGTCTTGAGACCCCTGACGGGCTGGCGGCCGGGCAGCGGCTGACTGTCCGCGCGGTTGCCGAGAAGCGACGCGAGGACGAGAGCGGGCGCACCCGTATCCGGGCGGTTCGGGACGAGGAGGCGGAGGACTGGGCGCGCGCGCTCCTGGGACGCCACGGCCTTGAGGTATGCGACCTCAAGGTGAGTCCCCGCTGGTTCCTGGGAAGCCGGGGGCAACGCTCCTTTATGGTCCGTGACCTCACAGCTACCGTGACAGCAGTACGAGAGGAGGCAGTACGTGCCTATGTCAGCGGTATCGGCCGCGGAAAGGCCTTTGGGTATGGCATGCCCATTGTGTTGTGATATCAGCACGTTTAACGTCGCTAAGTGCACAAACTGAGGTGCGACGCAGGCACGCCTCTGGTACCCTTGCGGGGTCCGCGGCAGCCAGCAGGTCGGCAGTAAATGCACGACGACCATCCGCCCAACAAACCTGCAGATCAGCTAGC # Right flank : ACACGCGCGTGTCGTCAATTCGGCCTCGCCTCCTTAGTTGGCCGTCCTGCCCTCGCCCGTCGTCGGCCCTGTACCACCTACAAACCATCTACAACCCTCGGTCAGCCCGCCAGCCGACCGCCACCGCTTGACGCACCGCGCAGGGCACCCTGGGGCTCACGGAATTATGCGTATATCTCAGGGTCGGGAGGAGGGGCGGCACAAAACTCGTGCAGTTTGCAAGAACTAGTGCATTCTGCAAGAACTCGTGCGCTCAGCGCCCGCACCTGACGCCCAGGACCGGACCAGGCCCCGGCAGCCCCAGGGCATCGCGGACCACAAGCCGGGGAGCTGGCCAGAGCGGGTCCCTGGTACCAGGCGGAGGGTGCGCCACGGCGGTCGGCCTGGCGCCAGGCGGGCAGGCGGGACACGCCAGGTGCATCGTGCGGACCCCGGCCGCGGCCTGGTGGCGGCTAGGCGGGCAGATGGGACACGTCTGGGGAGGCCAGGGTACGCCACGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACAGCTCCGCGTATACGGAGATTAAGG # Alternate repeat : GACAGCTCCGCGCATACGGAGATTAAGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 2186241-2185501 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 2186240 36 100.0 28 .................................... TGTTCGGCCGTAACCTGGTGGCGTACCT 2186176 36 100.0 28 .................................... CGGATCATCAACGGAAGCCTCGACCTGG 2186112 36 100.0 28 .................................... TGTGCTGGCTCCTCAAGGCCGGCGTGCA 2186048 36 100.0 28 .................................... TGGAGCGGACGAGGGCGGTGATGGCGTC 2185984 36 100.0 28 .................................... ACCGTCTCCATCGACAGGATCGCGATAG 2185920 36 97.2 28 .................T.................. GGCCTGAGCCAGAGGCCCCGCCACCGCC 2185856 36 100.0 28 .................................... ACCAGGTGGCGTTCGGCCTCGGGCAGGA 2185792 36 100.0 28 .................................... AGGCGTCGGTCTCCCCGAGGCCACCGGC 2185728 36 100.0 28 .................................... CCGAACGGGCGTGCGGGCAGCAGTATGA 2185664 36 100.0 28 .................................... GTGTACCCGTCATGGTCGGTCACCGTGA 2185600 36 100.0 28 .................................... CCCGCCCCAGTGGAGTCCGACGCCCTCG 2185536 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 12 36 99.8 28 GGAGTCTACCAGGGGGACTGAGGACTGATTCCCAGC # Left flank : CGTTCGATTCCACGGGCTCCACGCTTCCCACCGTCCTCGAACGTCTGGCTCAGCATCTGGGGCAGTACTGTGAAGGTGATCGTGACCGTTTAGATGTTCCTTCGTGGGCTGGACCTCAGAAGGTTTCTAATGGCAGATGACCCGATGTGGTCCATTGTCATGTTCGATCTTCCGGTCCTGACTGCGAAGCAACGTCGTGAGGCCAACCAGTTTCGGCACCTTCTTCTTGACGAGGGATTTTGGATGGCGCAGTACAGTGTGTACGTGAGGTACTCTCCGACCATGTCCGGCGAGGTTCGCAGAATCCGGGCCATCAAGGCTGCGCTGCCAGACGGCGGCGAGGTTAGAGTGCTCTATGTCACAGATCGCGAGTGGTCGACCATGCTCTGTTTTCGCGAGGAGGCTCCTCTTGCCCCGGATCCCGCACCCCAGCAGCTCACGATTTTCTAGTCACGGAGAACTGCGTATGCGCAGGTCAGAACCCCCTGGCAGGCTCATGA # Right flank : AGGTCGATGGCGGTGCGGAGCCTGTCGAGGAGTCTACCAGGGGGACTGCCCAGCTTGTCAGGATGAGGAAGGCGGAGATACGCTCAATTCGCGCAAGATGAGCATAGTGCGCAGAGCGTGTGCGCCACCGGTTGGCAGGAGGTCTGATGACTACAGCGGCGGAGAGCAGGACCTATCTGCCCGAGGAGGAGGTTGCTGGGCGGTTCGGTGAGATCGTGGAGATGCTGTCCTCGCACGGGGCGTCCGCGCACCTGGTGGCTGGTGGTGAGACGATCGAGCTGAGCCAGTCCATGGCAGACCTTCTGGTCCAGGTCGCTCGGGCGATGCGTCAGGGGCTCGCGGTGACGATCGCCCCGCACGGCACCCGGCTGACGACGCAGGAGGCGGCCGACATGCTCGGCATCTCCCGCTCTACCCTGGTCAGGATGCTGGAGGCGGGGGAGATTCCCTTCGAGAGAGTCCGTCGGCACCGTCGGCTCTGTCTGTCTGACGTGCTTGAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAGTCTACCAGGGGGACTGAGGACTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 5 2373259-2373003 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 2373258 38 100.0 33 ...................................... TGTCAATACACCTCCGCCACCAGGGGCGGCGAA 2373187 38 100.0 35 ...................................... TGAAGATTCGGAACAGGATGCTCGCTGGTGCGAAC 2373114 38 97.4 34 ..................................A... ATGGCCGCCGTCCGGGCTGTCATCCCCATGGCCT 2373042 38 84.2 0 ........................T.C...A..G..TT | G,A [2373010,2373015] ========== ====== ====== ====== ====================================== =================================== ================== 4 38 95.4 34 GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGACC # Left flank : CGCCCGCACGCAGACGACAGAAGAAGAGAGTCTTCCTCTGCCACACGACCTGCCCCAGACAAATCGGTCCACGATTAGATCCCGTTCCGTTCGCGCTATAATGGAGCCCAATGGCATGGTCTGCCTCTGTCTTGTGTGTCCTGTGCGGGAGAGTGGGCGGTACGGTGCCTGTGCTCGACGCCGTGGGCCTGCGCCGGAGTGGACCTAGTGAGGGGGAGGGGGCGCGGTGCGGGTGCTCGCGAGGTTGAGGCCAGCCGAACTTGTGGTCTTGGTCACCATCGATGTGGTGCGGGACACCCTGTCTGACTGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCCTCTGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAAGTGGTAGAAATGAGGCGCTCCAGCCACCTGCCGGAAGGGCCCCGCGGGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAACCACGCGCCTCCCAGGAGCAGGG # Right flank : AGGATCTGGTTGTAGGCTTGTGCTGTCCGCGCTGTAGGTCGTCCTGTGTGCCTGCATGCAAGGTGTCTTGTGTTCCTGTGGGCTAGCCGCACCCGTGTTGGCGCGACCAAGGGAGACCGGATCCACCTACCTCGGGCTGCCGGTCCGGGGCCTGTCCTGTACTGGCGTGACCGGAAATCCTCTGGGGTGGGTGGTGGGATGTTTTGCCGTCTGGTCTGGTGTCTGGGCGGGGCCGTCGCCATAATCCCTGTGCCTCGTACCGCCTCCGTCACTGTCCCGGGACCGGCCCTGACTGGCGGGCTACGATCCCTGCGCCACCTCTATCCATGGTCCGGGTCCTGTTTTGGGTTGGGGTTGGGTGGGTTATGCGCGGTCCTGGCAGTGGTGGGTAGTCGGTTCTGTCGCAGTCTGAGGATCAGAACCGGATCCACCCCGTTTCTACTTTTGTGCGCGTAATGTCCACGCAGGTCAGGGGCTCGGGCCCTGGCGTGGCCGGGAGT # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 6 2523447-2523775 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2523447 37 100.0 36 ..................................... GCTAGGGCCATGGCCGCCGTGCGGGCTGTCATCCCC 2523520 37 100.0 33 ..................................... CCTGAACGGACCAAACGATCCTAAATCGACAGA 2523590 37 100.0 37 ..................................... CAAGCAGGCGACAAGTGCAATAATGAACAAAGTAACA 2523664 37 100.0 36 ..................................... ATCTTAAGAGTCTCGATTTCCGCGAGCCGTTCAAGG 2523737 37 86.5 0 ........................A...G.A..GA.. | T,T [2523761,2523766] ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 97.3 36 GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Left flank : AGGCCGTTTTCGGGTCATGTGTGCGGGGTATCTTTTCCTGCTGCCCGGCCTGCTCCGGACAAACCACTCGATCCTATTCTGTCCGCGCTGTAATGGAGTCCGACGACGTGGCCTGTCTCTGCTTTGTACGTGTCCTGTACGGGACGGGTGGGGATCTACGGCACGGCGCCCGCGCTCGACGACGGGGGCTTGTACCGGAGGGGATCTGGTGAGGGAGGGGGCGCACGTGCGGGGGCTCGCGGGGTTGAGGCCAGCCAGACTTGTGGTCTTGGTCACCATCGATGTGGTGCGGGACACCCCTCTTGACCGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCTCCCGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAGGTGGTAGAAATGGACCCGTTCCGGCCACCTCCGGAAGGGCCCCGCAGGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAACCACGCGGCTCCCAGGAGCGGGG # Right flank : CAAACTCTAATTGTAGAGGATAGAGCATCCCTAATTGGTGCCGCTGGTGGGAGTGGTGCTGGTGTGCTGCTGTTCTGCCCGTGGGAGTCAGGGGCTGTCGGCCGGGTCGCTGTTACCGATGAGGGGAGGAAGGTCCTCGTGGGGAACAAACGGAGCGCGCCGTGTGTTCTCATGAGGGTGAAGTCGAGGGCGGTGCTGCTCCTGGCCGGGAGGACGAGACCACACCCCGGCCGCGGGAGGAGATCCCAGGGGGCTATAATCGGTTCCCCGGGCCAGGACAGTCGAGTTGGAGCCCCGCGGTCCTGAACCGGCCAGGACAGTACCACCATTATCGACGCCCTCGCAGGCCTGACCCTTGGGGGCACCGGGGGAGAGTGACGTAGTTGTTATCTGGGCAGGCGCAGGTTGGCACACGTCCAGAGGGGCCCCAGAAATGCCCCGGGAGGACCGGCCCGGGCCCCCGCCGGGCGCCTGGTCAGGCACGCCCACGCACCCGATCT # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 7 2685053-2684506 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2685052 37 100.0 36 ..................................... AGGGAACCGTTCAATGGCACTCATCAGGCTCGCTCC 2684979 37 100.0 37 ..................................... TGAACGCCAGCAGCGCCGGCGATACAGATAACGGCGA 2684905 37 100.0 37 ..................................... TGAACGCCAGCAGCGCCGGCGATACAGATAACGGCGA 2684831 37 100.0 36 ..................................... TCCCACATGGCGGGCCAGCCGCCCTTCGTGACGACA 2684758 37 100.0 34 ..................................... TCTCGTTCTCTCCATACCTATACTCGTAAAGGTA 2684687 37 97.3 35 ...........T......................... GCTGACAGCCCAAGGCAGGCGACAGTTATGGTCAC 2684615 37 100.0 36 ..................................... CGTCCCTGGACAGACCAAACGAGCTTGAACCTCGTA 2684542 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 99.7 36 GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Left flank : GCCGGGAAGCATCCGGGTAAGGGAGGGAAGGGATCCAAGAGCGCCGGGAAGCCCTCCAAGGGCGGAAAGGCCGCTAAGCTCGGTAAGACCGGGAAGGGCACGCGCAAGGCGGTTAAGAAGGCCGCGGCCAAGGCGGCCAGAAAAGCGGAGAAGGCCAGGAGGTCGCACAGCTAGGGTTTGTACCGGGGGATCTGATGAGGGGAGGGGGCGTAGGTGCGGGTGCCCGCGGGGTTGAGAACCACGCTTGAGGCTGGCCGAACTTGTGACGTTGGTCACCATCAATGTGGTGCGGGACACCCCGTCTGACTGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCCTCTGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAGGTGGTAGAAATGGGGTGCTCCAGCCACCTGCCGGAAGGGCCCCACAGGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAATCACGCGGCTCCCAGAGGCAGGG # Right flank : ACCAGCTTTGTTCGTCATCGTCATCATCAGCCAGGAGCACCCGGCCAGGGAACCACCCCGCACGCGCCCCCGCCCCTGGCACGGGCGCCGTCGGCCTGCGCCCCCGACCTCACACGCCACAGATCTGTTCTCACGCCTACGGGGCGCGGTAGACTGCCCGCCCATCACCCGGCTCGTCCGGCTACGGGCAGGTACCCGCAGCCGTCCACCCGTCCCCGCCTCATCCCTCACCGACTCGTCCGGCTACGAGCGGGTGCCGGGTACCAGGGCGAGCCACCGACCACACGCAGGAGGAACCATGGCTGAGGAGCAGAGCACCTGGCTCACTCAGGAGGCCTACGAACGACTCACCGAGGAGCTCGTACGCCGCAGGGAGGTCGACCGCAAGGAGATCACCCAGCGCGTCGAGGCGGCCCGGCAGGAAGGTGACCTCCGCGAGAACGCCGGCTACCACGCCGCCCGCGAGGAGGCCGCCCTCAACGAGGCCCGCATCGCGACCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 8 2912433-2913263 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2912433 37 100.0 35 ..................................... AGGTGGCTAAGGACATCGTCAAAGGAGATGACATC 2912505 37 100.0 36 ..................................... ATGACGGGGGTCTCCCGGGGCAGGTCGCCCGCAGCG 2912578 37 100.0 35 ..................................... AGGTGGCTAAGGACATCGTCAAAGGAGATGACATC 2912650 37 100.0 36 ..................................... CCCGGCACACGGCCCCACCGGCACGAGGCCGGGACG 2912723 37 100.0 34 ..................................... TCCTCGGCCACGGCCAGCGGCAGAGGCACGCGGC 2912794 37 100.0 35 ..................................... GATCCATGATCTGCGTCATCTCTCTCGTCCTCTCA 2912866 37 100.0 37 ..................................... GTGATCATCAGCGGGTCCTCCCACCAGCAGCGAGCCA 2912940 37 100.0 35 ..................................... GTGTCAGCCCCGTCCGCCAGGTGCCCGGCCGCAAA 2913012 37 100.0 36 ..................................... CCAGCCCCCAGCGCGGGGCGCCGCAGCTCCTGGGTG 2913085 37 97.3 34 ...................................G. TGGAAAGGATGAGAATGACAAAAATGATGATGGT 2913156 37 100.0 34 ..................................... GGGTCGCCAGCGGGCTCGGCGTCGCGGGGGTCGC 2913227 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 99.8 35 GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Left flank : GTGGGTTCACGATGAGGGTTTGTTCTGGTGCTGTGCTGAGGAGCCTAATGACGTGGTCCGTCTCTGTCTTGTGTCCTGTTCGGGAGGGAGTGGGACTCCGCCCTCTGGCGGGTCGGATACGGGAAGATGCGTCTCCTGTGCGGGACGGGTGGAGGTCTACGGCACGGCGCCCGCGCTCGACGACGGGGGCCTGTACCGGGGGATCTGGTGAGGGGAGGGGGCGCACGTGCGGGTGCCCGCAGGGTTGAGGTTGATCAAATATGTGACTTTGGTCACCACCAGTGTGGTGCGGGACACCCCTCCTGACTGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCTCCCGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAGGTGGTAGAAATGGACCCGTTCCGGCCACCTCCGGAAGGGCCTCCACAGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAATCACGCGGCTCCCAGAGGCAGGG # Right flank : CCAGCTCAAAAGAGCTGAAGCTCGCCCCCTCGACAGGTCAGGGAGCACCCCGCACCGCGGGGCTCTCTAGCTTCCTCCTGCGCGAATCTGGATAGGTTTATGCGGTGTCCTGTGCAGTCTGCCGTCTGTCTGCTGGCCCGGTTTTGTGTGCGTGTCGCAATCTGAGGATCAGAACGAGGGCCACTCTCGCCCGCGTCGAGGTCCAGGCCCCTGACCTGCGTGGACATTGGGCGCACAAAGATGAAAACAGTGTGGGGTCGGCTCTGATCCTCAGATTGCGACAGAACTGTCCGCCCGCCACCACCGGGGCCGTGCATAACCGCCGCGTATAGCCTCCTCCCGAGGCGAGGCAGGCCACCCGCTGCGACCAGGGCCCTGCGTACTCCCCCCTCCTCACCCCAGGGCGGGTCCCGGACCAGGTGGTGAGGCGGTGCGGGGCGCAGGGGTCGTGGTGGTGGCCTCGCGCAGACCCCGGACCGGGCAACAACGCGGCTCACCAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 9 2928553-2928344 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2928552 28 100.0 34 ............................ GTCCCGCGGCCCGCCGCCCGCGGCCCCCTGGGTC 2928490 28 96.4 32 ....................A....... GCGGCCTTTGGTGAAGGGCGGCAGCGCGGCCT 2928430 27 82.1 31 .....-.TT.............C....G CCCCTGGACACCCTGGCCCTGGCCCAGGCCG A [2928406] 2928371 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 4 28 94.6 33 CACGCTCCCGGCAGCACCGGGCGGCCGT # Left flank : AGGGCGAGCCAGGTGGCGGCGTCGGTCTCGACGACGCTGGGCGGGGTCCCTCGGCGGTGTACCGTCCCGGCTACGGCCTGGACAGCGCCAAAAGGTGGCACGCGGACCTCCACGCTCCGTCCGGGCGCGCAGGCGGCCAGCTCTTCCAGGGTAAAACGCACGGCGGTGGCCGTGACCTGCCGGGGCAGGGACTGGCCCTCCTGGGCCGCTGCCCACTGCCGAGCCGCGCGGGCCCCGTCCTGAAGGCTGACTCGTCGTCGTGCTGCCATGGCCCCAGGCTAGCCCCGCCCACGACAGGCCCCGCAAGACCCTGTCAGGAGCTGACCACGGCGTCCATCGGGAACCCCCGATCTGCTGGACGATGGTCAGGACGAGCTTGTCCCTGACCACGGCGTCCATCGACGTCGCACCAGCAAGACCTCGCCGGGAGCAGTTGGTGGCGGCCTGGCGGTCCTGGTCGGGCTCCCCGGCCTCACGAGCAGCTAGTACCGGAGGGGTCT # Right flank : TTGGTGCAGCCTAAGACTTACGTTTGGTGCAGCCTGAGACTTGGGGTGCCGGGTACAGGCTGCGACGGTGCTGACGCCAAGACTACCGAGGACTCCCGCAGGGGACTGGGGACAAGCAGCTATCAGCTCTTAGGGCCTGGGGTGACGAGAACCCCGCAAGGGACTGGGTAAGGGACTACCGATGGTCCGGCGCGCCGGACCCTGCGATGCCCGCAGGGGCCGGGTGAGGGGTCACCTGCTACCCCATGAGTCACGGTTACTGGGCGATGCCCGCAGGGGCCGGGTGAGGGACTACCAATGGTCCGGCGCACCAGCGGAGGATCTCCGCAGGGGGCTGGGGACGAGGCACCTGGGCCCAGTCGGGCAGCAGCACACGACCCCCGCAACTACCCAGGCACGACGCCGCCCGGTGACCGTACCTGACGGTCACCGGGCGGTATTGCAGCCCCGGTCGGGCCGGGTGGGGAAAGCCCGACCAGAAGCGGCTATGAGGCGGGCAC # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACGCTCCCGGCAGCACCGGGCGGCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.20,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 10 2980619-2981017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 2980619 38 100.0 31 ...................................... GCGAACTCCGCCGCGGACGCGACGGGACGTC 2980688 38 100.0 35 ...................................... GACTCCTTCGGGCGTGACAGCCCGCCGTCCTGGGA 2980761 38 100.0 37 ...................................... GGTAGACTACTTGCTGAAGTGGCGGAGTGCCGCCTTC 2980836 38 97.4 32 A..................................... TAGGGCGGCGAACAGGTTCAGCCTCGGGATCT 2980906 38 100.0 33 ...................................... CTTTTAATCCGAAGGTCGTGGGTTCGAGACTCA 2980977 38 76.3 0 C.........................CCC.C...GCGT | G,CT [2980992,2980999] ========== ====== ====== ====== ====================================== ===================================== ================== 6 38 95.6 34 GGTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Left flank : TTCCAGGGGTGGGGGTACCGTATTCAGGAGTCGGTGTTCCAGCTGCGGGTCGAGCCCGCTGACCTTGAGGTACTGCGTGGTAGGATCAGGGACATTATTAAGGAGTCCGACGACGTGGTCCATCTCTGCCTGTTGTGCGCGTCCTGTGCGGGACGGATGGAGGTCTACGGCACGGCGCCCGCGCTCGACGACGGGGGCCTGTACCGGGGGATCTGGTGAGGGGGCGTGGTGCGGTGCCAGCGGGGTTGAGGCCGGTCGAGTCTGTGGTCTTGGTCACTACTACTGTGGTGCGGGACACCCCTCCTGACTGCCACTTTTCCGCATGGTCTCGTCCAAAGCCGGCGCCGGATCCGCTCCCGGGGCCGTCGGTGGCGAGTGGCGTCATACCAACGAAAGGTGGTATAAATGGACCCGTTCCGGCCACCTCCGGAAGGGCCTCCACAGGCCGGTGGCGATCCAGCCCCTGGAAACGTTGCAATCACGCGGCTCCCAGAGGCAGG # Right flank : TGGACGGGGCAGGGCCTGTTTGCAGGGGTCGGGGCGCAGGGTGTTTGCTTCCGGGTTCAGGCGGTGTGCAGGTCGTGTGGGGTCGGGGGTGGTCGCCGTCGGGCGGGAGGTCGTGGTGCCTGCTGGTGGCGCGGGGCCGTGTTGCACATTCATCCCGGGGTCCTGGTGGGGTCGTTGGCGTCATTCCAACGTTTTCCCGCCCCGTGGGACGTCCGGGGACAGGATGAATGTGCAACTCGGGCGCCGTTGCACATTCATCCTGTTTCCGGGCCCTGGTTTGCCAGGCAGATCCGCGTGGTCCCGCCGTTTACTGATCGCGGTTTGTAAAAAGAATGTGCAACTCCGGCTGACGGCCGCTCGCGAGAGCCGCCTGAGCCACCTGGGCGCCGCCTGAGCTGCCATGACCTGCCTGTGGGTGCCATCTGAGCCGCCGTGGCCTGCTTGCGAGCCGTCCGCGGCTGCCATGGCCCGTCCGCGAGCCGCTTGAGTCGCCATGGCCT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCAGGGAGCACCCCGCACCGCTAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 11 3081841-3068689 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027236.1 Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3081840 29 100.0 32 ............................. TCCTGAATGCGGCCGCTAATTCGCTTATCGAA 3081779 29 96.6 32 ............................T GGCTCAGGGTCACCAAGGACGCCTACATGGGA 3081718 29 100.0 32 ............................. GGAGTAGTGTCCTGGCTCACCAACCCAGATTC 3081657 29 96.6 32 ............................T ATGATTCTTATCCACATGGAGAAGGAGATTAT 3081596 29 100.0 32 ............................. CAGACACGCGGCTGGACACCCGCCACCATCGA 3081535 29 96.6 32 ............................G TGGTTTTGGGTTGATTTTCCAAGATTTCTGTC 3081474 29 96.6 32 ............................T CCCGTCGTCACAGGCACCCTAGCAACGGCCAC 3081413 29 100.0 32 ............................. GTCAATCATGAACAGCCCAAGGCCGTCGGAAA 3081352 29 100.0 31 ............................. GCGCCCGCCGCGCCCGCAGAGACCGCGCAGC 3081292 29 100.0 32 ............................. GTAGCCACCCTAACAACTGCCACTGACATCGC 3081231 29 96.6 32 ............................G TGAGGCCAAGGCGGCCCCACGGGAAACCGTGG 3081170 29 100.0 32 ............................. CCCCTCGTCAAGCGCTCCCTGGTGATCGTGGA 3081109 29 96.6 33 ............................G GTCTCTCAGAAACGCTCACAGCGTCTCTGAGAG 3081047 29 96.6 32 ............................G CAGTACTTGAGCATGGCCGGCTTCGCCCTGAG 3080986 29 100.0 32 ............................. GATCACCCTCTACCGGACCCTCAGGCCCGGGC 3080925 29 100.0 32 ............................. GCGGAAGCCACCAAGGTGAACTATCTGACTTG 3080864 29 100.0 32 ............................. TACCGCATGAGAAATTGAGAGTCATCTACACC 3080803 29 96.6 32 ............................G ATAGTCGACAATAAAACTACCGTCAAACGCCA 3080742 29 96.6 32 ............................T GACGGGTTCTGGCATGTTAATATTCCGGATCT 3080681 29 96.6 32 ............................T GCCGCGGCAAGAGCGTCAACGTCCATCGCCGC 3080620 29 96.6 32 ............................G GAGGTGCGGCTCATGGGCCGCACCGTCGCCCG 3080559 29 96.6 32 ............................G GGCACCAGAGCCCGACCGACCTACCACAAGGA 3080498 29 96.6 32 ............................G AACCCCGGCAGCACGTGCAGTTTGGCGACCAA 3080437 29 100.0 32 ............................. GATACTGTTATGGGGATGATGCGAACCGCCTT 3080376 29 96.6 33 ............................G GTTTACTCCAATGGCTACTGACATTTCTACTGA 3080314 29 100.0 32 ............................. TGAAGCACGTCCATCACCGGGACCACGCCCCC 3080253 29 96.6 32 ............................G TGAGCCATGACCTCCGCGTCGTACAGGCCCGT 3080192 29 100.0 32 ............................. TTTATTGGGAGGATTCTGGTGAGGTATTCTGA 3080131 29 100.0 32 ............................. CCACGGGCGTGTGATGGTGCACATAGCGGTGT 3080070 29 100.0 32 ............................. CCTGCCATAAACTTCGGCAATAGCCTTGGACG 3080009 29 96.6 32 ............................T ATTAAGCAGTGTCTGCCGGTAGGACATGAGAA 3079948 29 96.6 32 ............................T ACGGGCCACCCACAATGCCAAGCCTAGAAGCC 3079887 29 100.0 32 ............................. AAGGCAGAAGTCGCTTCCCCCAGGGTACAGTC 3079826 29 96.6 33 ............................G AGCCTCCCTCTCTCCGTCCTCATGGAGGTGTGC 3079764 29 100.0 32 ............................. GACTTCTTCGGCACCACCACCGCCGGGCTGGA 3079703 29 96.6 32 ............................G GGCGCCCTCACGGCCCGAGGGTGGACCATAGC 3079642 29 96.6 32 ............................G TTCCTCGACCAGGCCACCGTCGGCGGCATCAG 3079581 29 96.6 32 ............................G CCCTGCACGCCATGGCCCCGGCGGGAGGCGTG 3079520 29 96.6 32 ............................G CTCCCGATCGGGGTCGGGGCGGCGTCTATCCA 3079459 29 100.0 32 ............................. GCCCACGGCACCCACCTGAGGGACGACCTGGA 3079398 29 100.0 32 ............................. GCCAATATCCGGGCCGGCTACGTCTACGTAAT 3079337 29 100.0 32 ............................. GCAGCCGGCAATATTCTCACAGGTCTCGCCAC 3079276 29 96.6 31 ............................G GTCCCCGAGCCGTCGTTGCCCCCGTAGACGG 3079216 29 96.6 32 ............................G ACGCTTACTACTCTCATAGGCGAGAGAAAGCG 3079155 29 96.6 32 ............................T GTTTGACGAATTTATCATCGGAAAAGGTTCTC 3079094 29 100.0 33 ............................. TGGGACGAGTTTCTCGCTACTACGTCGCTCTTT 3079032 29 96.6 32 ............................T GGCGTGTTTCATCTGGTCAAAATCGATTGGGT 3078971 29 96.6 32 ............................G GAGGCCGCGCTTAAACTCGGCCAGAGGATTCT 3078910 29 100.0 32 ............................. TGGTGCCCGAGAGAGTCCCAGGAGGGGTCATC 3078849 29 96.6 32 ............................A TTCTCACTACTGGCGCCGGGAATGTCGGCCGC 3078788 29 96.6 32 ............................G CCCCGTGTCAGGTTTTCCCGGCTCAGGTGGTT 3078727 29 96.6 33 ............................A TCGAGTGCCGGCCAGAGATGAGCTCGGGGGACT 3078665 29 96.6 32 ............................G AGTGGAAGTGCGAAGGAATTCCAGGCTTCGAA 3078604 29 100.0 32 ............................. CGTGCTACAAAGAACCGCTGTAAGCCAAAATA 3078543 29 96.6 33 ............................A GATTCCTCTCCCTGTCGCTCAGATTCCGAAGGC 3078481 29 96.6 32 ............................G CGACGCCACGGCGGTAATGGGCTCACTCATAA 3078420 29 100.0 32 ............................. AATAATGAACTGGGGGTCAGACGGCCTACCCC 3078359 29 96.6 32 ............................G CGACGCCACGGCGGTAATGGGCTCACTCATAA 3078298 29 100.0 32 ............................. TACGCGACAAGCGCCGCCGACAGCAAGAGCGT 3078237 29 96.6 32 ............................T CACCTGGCAATCAATGTGATTGCCTTCCTTAG 3078176 29 96.6 32 ............................T CCAATCCACAAGACGCAAAAAAGCTCTTCAGA 3078115 29 100.0 32 ............................. TCCTCCTCGGCCACGGTGCAGTAGCCGTGGTC 3078054 29 96.6 32 ............................G CGTACCCACGGCCCACGTCACCCCGACCCGAC 3077993 29 96.6 32 ............................G ACACCACCATGGACACCGACCCCACCACCCGG 3077932 29 100.0 32 ............................. CGCGCGGCCCCGTCGGCGTCCGCCAGGACCTG 3077871 29 100.0 32 ............................. CTGAACGAGAACTCTAATTCCTCCCTCACCGA 3077810 29 96.6 32 ............................G CCACCACACAAAACCCGAGCAATCCGTGACAC 3077749 29 96.6 32 ............................T CGTTTCGCGTGGGACGGGATGCCCCCGGAGAT 3077688 29 96.6 32 ............................A CGTTCGGGGAACGTCCTGCCCGTGCCCATTTT 3077627 29 100.0 32 ............................. AGGCTTGGAGACCATGTCCCGAAGACGCTTCG 3077566 29 100.0 32 ............................. GACACTGTTATGGGGATGATGCGCACGGCCTT 3077505 29 100.0 32 ............................. CATAGCTTCCTCCGAGTGGCGGGCACCACATG 3077444 29 96.6 32 ............................G ACACTTGCCGAGGACGCCAGCGACCGCGCCAC 3077383 29 96.6 32 ............................T CCCGATGCCGGCCGGATTGCCTCCTGGGCCGG 3077322 29 96.6 32 ............................T CATCCCGGTTAGGCGTCGTCTCAAAATCCGCC 3077261 29 96.6 32 ............................G GACGCCTATATGGGAGCAGTCACCGTCACCGA 3077200 29 96.6 32 ............................G CGTTTCTGGCGGCCAACTCCATTCACCCCCAC 3077139 29 96.6 32 ............................G GTGGTGCGCTGTTTCAGTTCTGTTTTGTAGCG 3077078 29 100.0 32 ............................. ACCGGCAGCAACAAATCGAATACCGATTCGAT 3077017 29 96.6 32 ............................T GATGTGATGGTGGGCACGAAGATGTGACCCCC 3076956 29 96.6 32 ............................T ACCGCTCATGACGCCACCGAAAGCCGCCGACA 3076895 29 100.0 32 ............................. ACGCCGGTGGGGGTCATGCCCCGCCGCGTGGC 3076834 29 100.0 32 ............................. GATTCTCTTCGATGCGCTTCTCCGTAACTACA 3076773 29 100.0 32 ............................. TCACCAATTCTCTTGCGTGCGCCGGAATTAAT 3076712 29 100.0 32 ............................. CAGCCCGTGGTGTTTTCGGTTGGTCCCATATC 3076651 29 96.6 32 ............................T CGTTGAAAACCGAGCATTCGTTGTTCAGGTAG 3076590 29 96.6 32 ............................A AAAGTCCAAGAATGGGCTTCAACGCCACGATT 3076529 29 96.6 32 ............................G CCGGGCACCGAAGTGCCCGGCATCACACCTCA 3076468 29 96.6 32 ............................T ATCTGTGCGAATGCGTTTCGCGTGCGTGGCGT 3076407 29 96.6 32 ............................T GAGGCCGGCGACAGTGTCCCAATCCCCCGAGC 3076346 29 100.0 32 ............................. GGGGACCGCTTCTGGTGGGATGCGGGGGAGAA 3076285 29 100.0 32 ............................. CTCTTTAACGAGGTCCTCGACGACGCCATCGC 3076224 29 96.6 33 ............................G GGGCCGACAGGCGGCGCATGCCCCTCCCGCTGA 3076162 29 100.0 32 ............................. GTCGACACCACCACGACCGATGCCGAGGCCAA 3076101 29 100.0 31 ............................. GATCACCCTCTACCGGACCCTCAGGCCCGGG 3076041 29 96.6 32 ............................G CCCTCATCCACGCAATGAAAGCCCGCGCCGAG 3075980 29 100.0 32 ............................. TAGACCTCACGTCAACATCATGAGTCCCGAAA 3075919 29 96.6 32 ............................G ACGGGGTACGTGACACGCGCCGACGGCTTTAT 3075858 29 96.6 32 ............................A ACTGTCTCAGTGAGGATGACGCCTCCTGGGAC 3075797 29 96.6 32 ............................T CCCGTCAGCACTCTTAGAAATCCACCGAACTT 3075736 29 96.6 32 ............................G TCCGTGCCCGGCGTGTTGATGGATGCTTTTGG 3075675 29 96.6 32 ............................T GGGGCTGACAGGTAGTCGGAGGTGTCTGACTG 3075614 29 100.0 32 ............................. ACCCCCACCACAGCACACCCCGAAAAACGCGC 3075553 29 100.0 31 ............................. TCACCGACCGAGTAGCCGGTACACGCCCGGA 3075493 29 100.0 32 ............................. ATGCCAGAAACCATCATTCTTCTCATACTCAG 3075432 29 96.6 32 ............................G GCATGCATTATCGCTACACTCGCCGCCGTAGA 3075371 29 96.6 32 ............................G GGAATCCCGGGCCTTGACGGCGCTGACATGGC 3075310 29 100.0 32 ............................. GCCCCAAAAAGGAATCATTGCACTCCTACGGG 3075249 29 96.6 32 ............................G AAGTGTCTGCCGGTAGGACATGAGAAGCTGGC 3075188 29 96.6 32 ............................T AGTCTACATTATCACTCTTAAGGTCACGGTTA 3075127 29 96.6 32 ............................T TCGCCCACCACCATCATATCTATATTAAGAAG 3075066 29 96.6 32 ............................T TCTCAGGGTCAAGCCGCCCGTATCCCTGTGAG 3075005 29 100.0 32 ............................. CATTCCACGGCATTTCCACATCCGACGTAGCG 3074944 29 100.0 32 ............................. TGCGTTTTCCGACTTCGTGGCGTCGGTAACGG 3074883 29 96.6 32 ............................T TGAATGCCGACCGGAGATGAGCGACGGCGACT 3074822 29 96.6 32 ............................G GCATCCGCGGCTAACATCCTCGCAACGGCCTC 3074761 29 96.6 32 ............................T TCCCCGCCGTCAGACGGCTCGGAGGTGGGCGG 3074700 29 100.0 32 ............................. TTGCCCCCCGCGTCCTTCGTGGAGGACTTGAT 3074639 29 100.0 32 ............................. TACTCCGGGGTCCCGGCCGGGCACCGGATCCC 3074578 29 96.6 32 ............................T GTGAATGTGGTGCTGGCGTGGACGGCGGTCTT 3074517 29 100.0 32 ............................. GCGGTGACGGACAGGCCCTCGTGGTCCAGCAG 3074456 29 96.6 32 ............................G TGGTACAAACCCAAGCACTTCCCGGCCGCGAG 3074395 29 96.6 32 ............................G TCGGGTCGCCGTGACGCCGATCACGCACGCAG 3074334 29 100.0 32 ............................. GCCTCGCTGGCCTCAGTGATCTCGGTCTCAGT 3074273 29 100.0 33 ............................. CCCCTCACGGTGCACGCCGCGCGCGTACCGTGC 3074211 29 100.0 32 ............................. GCCTCGCTGGCCTCAGTGATCTCGGTCTCAGT 3074150 29 100.0 33 ............................. CCCCTCACGGTGCACGCCGCGCGCGTACCGTGC 3074088 29 96.6 32 ............................G CCATTCTAACCATCATCAAGATCCGGCAGGAA 3074027 29 96.6 32 ............................G GGGGCCGCTCAGCGCCTTCCCCTTCGACCGGG 3073966 29 100.0 32 ............................. GATCACCCTCTACCGGACCCTCAGGCCCAGGC 3073905 29 100.0 32 ............................. TGTTCCCTCGGCGACCTCGCGGATCGATTTCC 3073844 29 100.0 32 ............................. GCTGACGAGCCTCCCGGACATGATCGTAGCAA 3073783 29 96.6 32 ............................G CCCGGGAAAGGCCACCAGCGGCCCCGCCAGCG 3073722 29 96.6 32 ............................G TTGTGGACGTGTGACGCCGATCACGCACGCAG 3073661 29 96.6 32 ............................G TCGGGTCGCCGTGACGCTGGTCACGGTGCCCG 3073600 29 100.0 32 ............................. CGTATGATCCCCGAGATCACCAAGATGACAGG 3073539 29 100.0 32 ............................. CGGTCCTCCCTACCACGCCCCGTATCCACCCA 3073478 29 96.6 32 ............................G TTGTTGACCACTGTGGCCCGCAGCACATCGTC 3073417 29 96.6 32 ............................T CCAATCCACACGAGCAAAAATAAGCGGACCGA 3073356 29 100.0 32 ............................. CCCCTCGTCAAGCGCTCCCTGGTGATCGTGGA 3073295 29 96.6 32 ............................G GGCCGTCACCACCGGCGCTTGCGCGGGCACCG 3073234 29 96.6 33 ............................T TCTCCGGCGTAATGCTGGGCGTACCCCTGAGCA 3073172 29 96.6 32 ............................G CGGTTTTAGGTTGATTTTTCGGGATTCTCCTA 3073111 29 100.0 32 ............................. GCCTCCACCGTCGGGTCCTGGGGGGCGTCGCC 3073050 29 96.6 32 ............................G GCGTCGTCGCTGAGCGCGGGCTGACCGTAGTC 3072989 29 96.6 32 ............................G GCAGCTGTGAGGCTCCAGAGAATCGGTATCGG 3072928 29 96.6 32 ............................G GCGTCGTCGCTGAGCGCGGGCTGACCGTAGTC 3072867 29 96.6 32 ............................G GCAGCTGTGAGGCTCCAGAGAATCGGTATCGG 3072806 29 96.6 32 ............................G GCAGCTGTGAGGCTCCAGAGAATCGGTATCGG 3072745 29 100.0 32 ............................. GCTGTAGGCGCTTCTGGAAGAGGGCTTCTGTC 3072684 29 96.6 32 ............................G GACGCCCAGGCCCAGCAGGCCGCGACCCTGGC 3072623 29 100.0 32 ............................. TACGCCCTAGAAAGCGAGAAACGCCAGCCCTT 3072562 29 96.6 32 ............................A GGGGGACACATGACGACGGAAAGCCGCTCAGA 3072501 29 96.6 32 ............................G TCGGCCGAGCGGATGCCAAAGCACTCATGAAC 3072440 29 100.0 32 ............................. GCGTGGGGCGCGGTCACGAAGACCGCTATGGC 3072379 29 96.6 32 ............................A ACTTAGGTAAACCTAACCCACCCATAACCCTT 3072318 29 96.6 32 ............................G GACTTCTCCCGCCGCCGGACGTCATCATCACC 3072257 29 96.6 32 ............................T GGATAACCACGCGCTTCTACGGATGGACGGAC 3072196 29 100.0 31 ............................. CGCCCACGACGACCATACGACCGCGCCACGC 3072136 29 100.0 32 ............................. GGCCCCCAGCCCGAAAGGGCATCCCCGCTCAC 3072075 29 96.6 32 ............................G ACAACCTTGCCGTCGGCGTCGGTGATGACGCC 3072014 29 100.0 32 ............................. GTGCCCGACAAGGAGTAGTTTTGGCTGTTAAC 3071953 29 86.2 32 ...........GT.T.............G GGTAGCACAATTCGACAACCTTAAGATTCGTG 3071892 29 86.2 32 ...........GT.T.............T AAGCGAAAGTGCCCATTACCGAGCGTGCGAGT 3071831 29 86.2 32 ...........GT.T.............T GTGGGCGGTAGCAGTGAGGCGTCTAGTAGTGA 3071770 29 86.2 32 ...........GT.T.............T GTATGATCGGAAATCCTGAGGTCCGTCGGTGG 3071709 29 86.2 32 ...........GT.T.............T ACCCTGTCAACTGGGGTGAACGCTGCGGGCAA 3071648 29 86.2 32 ...........GT.T.............G CCGCTCAGAGACGCTCACAGCGCCCCTGAGCG 3071587 29 86.2 32 ...........GT.T.............G GCGACCGAGCGCCTCCGCCTGGACCACCTCCT 3071526 29 89.7 32 ...........GT.T.............. GTCCTCAAGATCGTCCGGGAGACCGGCGACGA 3071465 29 89.7 32 ...........GT.T.............. CCGTTTTTTATGACCTCTGATGAGGCCTCGCG 3071404 29 89.7 32 ...........GT.T.............. CACCTAACCCCCACAGGGCCACACACGACGGC 3071343 29 89.7 32 ...........GT.T.............. CCCAACACACCCCCACCAAACTTAGGTAAACC 3071282 29 89.7 32 ...........GT.T.............. ATGCGGCGCATGCGGGCTGAGTCCGTGCGCGT 3071221 29 86.2 32 ...........GT.T.............T CAGTGGCCACGTGACGCCAGTCACGCGGTCAC 3071160 29 86.2 32 ...........GT.T.............T CAGCTGGCCCACGTGCAGTGGCACAGTGGCCT 3071099 29 86.2 32 ...........GT.T.............T TTACATCACGCCCCAGCACCAGGCGTCGCCCA 3071038 29 86.2 32 ...........GT.T.............G CCAGCCAAACTTAAGTATTCCCGGGGGGGCTT 3070977 29 89.7 32 ...........GT.T.............. CGGCGGCCCCACGCGTCACAGTGCTCGCTCAG 3070916 29 86.2 32 ...........GT.T.............G TCAGGTCGCCGTGACGCTGGTCACGGTGGCCG 3070855 29 86.2 32 ...........GT.T.............G TCAGGTCGCCGTGACGCTGGTCACGGTGGCCG 3070794 29 86.2 32 ...........GT.T.............G CTGGTGCGGTACGCGACAGACTACCTGGTGTC 3070733 29 86.2 32 ...........GT.T.............G GCCGTGCGGGCGGCCCTGGGGGAGCTGGAGGC 3070672 29 89.7 33 ...........GT.T.............. CGAGAGCCTGGGGTGTGGGCGCGGGCGGGAGGG 3070610 29 89.7 32 ...........GT.T.............. AGGGTCTCCCACATGTACGAGCCCACCGACCG 3070549 29 89.7 32 ...........GT.T.............. GGTGATCGTCGGGTCGGGGTCGCCCGGGCCGC 3070488 29 89.7 32 ...........GT.T.............. AGCCCAAGGCCGTCGGAAACGCCACCGACGGC 3070427 29 89.7 32 ...........GT.T.............. ACCCATAACTATACACACTCTAGTGAGTATGG 3070366 29 86.2 32 ...........GT.T.............G CCAGAGCCACCATGCTCAACCACGCCCTCGAA 3070305 29 89.7 32 ...........GT.T.............. CCCCGTGCCGCCTCATGGGAGGCCGCATGGCT 3070244 29 86.2 32 ...........GT.T.............G TCCTACATGCCCCAGGGCAACATGTTAGAGTG 3070183 29 86.2 32 ...........GT.T.............G AGGGCTTCCCGCCACTAAGACACCCCCGCATA 3070122 29 86.2 32 ...........GT.T.............T GGATTACTCGCATCAACAATCGAAATCCCCCT 3070061 29 86.2 32 ...........GT.T.............G GCGGCCACTCCCAGGTACCGCTTGGGTTGGGG 3070000 29 86.2 32 ...........GT.T.............A TCCCGCCACCCCGACCATAAAACGTTGAAATT 3069939 29 86.2 32 ...........GT.T.............G ATCCGGCAGGAACTGGCCAAGGGCAAGCGGTC 3069878 29 86.2 32 ...........GT.T.............G TTCGGCCGACGACTGAGGCTGCGCTCTTGATC 3069817 29 89.7 32 ...........GT.T.............. CGTGGGGCCACCCCTCCCTCGACCACCAACCG 3069756 29 89.7 32 ...........GT.T.............. GCGGGGTCAACGGACGACTCGTGGGCCTACAG 3069695 29 89.7 32 ...........GT.T.............. AGGCGACAAACCCCGGAATCCCGTCGTCACAA 3069634 29 89.7 32 ...........GT.T.............. AGGCGACAAACCCCGGAATCCCGTCGTCACAA 3069573 29 89.7 32 ...........GT.T.............. CGTGGGGCCACCCCCCACCTCCCTCAACCACC 3069512 29 89.7 32 ...........GT.T.............. TGGTCGCCCGACGCCAGCCCGGCCGGGGCGAG 3069451 29 89.7 32 ...........GT.T.............. CAGTGGCCACGTGACGCCAGTCACGCGGTCAC 3069390 29 86.2 33 ...........GT.T.............A GAAGGGTGAGCCTACTCACATGAGGTGCGTCTG 3069328 29 89.7 32 ...........GT.T.............. AAGGTGCTGGATCTGCTGACTGCCGTAGTCAG 3069267 29 86.2 32 ...........GT.T.............G GGTGGCGCGACATGGACGGGGGCTGGCAGGGG 3069206 29 86.2 32 ...........G.AT.............G GTGGTGGCGGCCGAGGCCGCCGTGGCCGCCGC 3069145 29 93.1 32 ...........G..T.............. CTCCGCTTCCCGTCGGAGTCGTAGCGGGAGGC 3069084 29 89.7 32 ...........G.A..............G GAGGTGCGGGGCTGATGGCCAAGAGCGTCACC 3069023 29 86.2 32 ...........G.AT.............G ACCAGCCAGTGGCCGCGCCCGTCGTGGACGGC 3068962 29 89.7 32 ...........GT.T.............. ATGGACTTGATGCCGTCGAGCAGGCCACGGAT 3068901 29 86.2 32 ...........GT.T.............G GAAAAACGCCATGCTCGTCACCCTTGAGCAGG 3068840 29 82.8 32 ........T..GT.T.............G TTCTCGGTCGTGAGCTTACCCTGACCGGCGGT 3068779 29 96.6 32 ............................G ACGGGGTCGGAGTTCTACCACGCCCCGGTAAA 3068718 29 89.7 0 ...........G..A.T............ | T [3068692] ========== ====== ====== ====== ============================= ================================= ================== 216 29 95.5 32 GTAAACCCCGCACGCGCGGGGATGATCCC # Left flank : GCGGCAGTCTGTTGCCGGCGGCGCGAACTACGCCGAGGAGGATGCAGGAGGATGGTAGTTCTCATTCTCTCGGCAGCACCAGCGTCACTACGCGGGACTGTTACCCGGTGGCTCCTAGAAGTGTCATCCGGAGTGTTTGTTGGCCGTCTTTCGGCTCGTGTGCGTGAGCAGTTGTGGGAGCTGGTTCACGCCTACATTGGCGAGGGGCGCGCGCTACTGATCTGGACGGTGCGTTCCGAACAGCACTTCGCAGTCTCGTCGCTAGGCTACGATCGTGAGCCGGTTGACATTGAGGGGTGCCTGGTGATGAGGACGCCCTACCAGCAGATCGAGGGGGCACGGGCGGTCCCGGGCTCGGTCAAGCCGCCCAGGGAGTCGTGGTCCATCGCGGCTCGACGGCGGCGCTACCGCAACTCTGCCGAGCGGGCACTAGGTCAGCAGTGAAGGAAACCGGGGGGTGGTAGACTCCAGGACCGTTGGGATTCCAAGGATCGCCAAGT # Right flank : GTTCCCAGGGCATTGCATAGGGCCAGTCACGCATCACAGGACTCCAAGCTGCACTGGTTCTTACATACCTCATTAATCCTTGTACCGCCATTCTTCCGAACACCGAGATACCCGCATGGTTCCGAAGCCTTCCGGTCCTCCTCTGCAAGAAATAACGCAACATGCAAGAACTAGTGCTGCCCAGACGGTGGTCGTGACCCTCAAGACCTATCCCCGTAAGAGGTGCAGGCAATACCGTAAGGACGCCTGAACGGCGACAGGACTTGGAATTAGCCCGGCTACCTCCATAGCACGAGCAAGACAGGATCTAGTTGCGTGCTTATTCCGTCTGCGCCGCATGTCTAGGATGCGGTGGCCAGCAGCCTCCGTCGGGCCGGCTGGCGGTCACGGGCGCTAGCGCCAGCCGGACCTGCTGGCGGTTACGGGCAGGCTGTCAGCTGGCCCGGCTGGCGGAGTTGCACATTTTTTTTACAATCGGCGATCAGTAAACGGCGGGATCA # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCACGCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCCCGCACGCGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //