Array 1 45189-44163 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FEVT01000007.1 Neisseria meningitidis strain 2842STDY5881282, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     45188	    36	  94.4	    30	........G...A.......................	TTCTATTATAAAAGCTGCCTGACTTACTCG	
     45122	    36	 100.0	    30	....................................	CGACAACAAAGCCGTCTATGACCTGACCGA	
     45056	    36	 100.0	    30	....................................	TTGGGAGGTGGAAAACCGAATCCTGCACGA	
     44990	    36	 100.0	    30	....................................	AAGCAAATCATTTTCATAGTCAGCAGCTTC	
     44924	    36	  97.2	    30	......................T.............	ACGTGAGTTTGTCTATGAGTTCGACGGCGT	
     44858	    36	 100.0	    30	....................................	TGAGAAAGATTTAAGAACTAAGTTCCCATC	
     44792	    36	 100.0	    30	....................................	CTTTCACTTCAGTAATGGCTTCGGCATATA	
     44726	    36	 100.0	    30	....................................	TAAATTTTTGATTTTGATTTTTTCTATACA	
     44660	    36	 100.0	    30	....................................	GTGGGAGTTCGTCTATGAATTCGATGGCGT	
     44594	    36	 100.0	    30	....................................	TTTGCTGCCCGACAATGCGCGTCCGCAGAT	
     44528	    36	 100.0	    30	....................................	TGAGAAAGATTTAAGAACTAAGTTCCCATC	
     44462	    36	 100.0	    30	....................................	TTCCAAAGTTTTAATTTATATTATTTTAGT	
     44396	    36	  97.2	    30	............................A.......	CAGAAGATGATAACTGTGCTGGGGGTGCGT	
     44330	    36	 100.0	    30	....................................	ACGCAATAACGGCGAGTTTACGCATCAATG	
     44264	    36	 100.0	    30	....................................	TAACGATTGAAAGTGAGTATGTATTAAGTA	
     44198	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  99.3	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//