Array 1 84795-86774 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAQQS010000007.1 Lactobacillus acidophilus strain La-5 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 84795 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 84856 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 84917 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 84978 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 85039 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 85100 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 85161 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 85222 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 85283 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 85344 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 85405 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 85466 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 85527 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 85588 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 85649 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 85710 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 85772 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 85833 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85894 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85955 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 86016 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 86077 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 86138 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 86199 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 86260 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 86321 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86382 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 86443 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 86504 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 86565 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 86626 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 86687 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 86748 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //