Array 1 2879259-2876560 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001403.1 Mucilaginibacter paludis DSM 18603 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 2879258 46 100.0 30 .............................................. AGCAGTACATGGCGAAACAGCGTCTCAGCG 2879182 46 100.0 30 .............................................. GGTCGGTAGCATCTTGTAGTTTTTGTTCAA 2879106 46 100.0 30 .............................................. TGCTGTGCGCAGCAAGGAAACTCTGGACTG 2879030 46 100.0 30 .............................................. GGTTCTCGTCGTTAAGGCACCGGGAGTTAT 2878954 46 100.0 30 .............................................. GGCTCAACTGGCAGCACTGTAATCATACTG 2878878 46 100.0 30 .............................................. ATTGCGAGCTTCTATCCCATATCACCGTAT 2878802 46 100.0 30 .............................................. AAGGGTTGACTGCCCCGGTTGATAGTAAGA 2878726 46 100.0 30 .............................................. CCCATGCACCTAACGAAGCGCCTAACATGG 2878650 46 100.0 30 .............................................. TAATATCCCTAAGCTGAACTTCGCCACTTT 2878574 46 100.0 29 .............................................. CCCCGGTATACCACGAAGCGAAAGATTGA 2878499 46 100.0 30 .............................................. AAGGCAGCGCCCATATCCACCGCGGCTGAC 2878423 46 100.0 30 .............................................. GGAGTGCCAGTAGTTGGTATAACTAAAATC 2878347 46 100.0 29 .............................................. GTCGTGGCCGTATGCAGTAACCCTACATG 2878272 46 100.0 30 .............................................. AACACATGGCATGGGCAATAATCATTCGGC 2878196 46 100.0 29 .............................................. TGCTGCAAGCCTTTCGCGCTCTATACGGT 2878121 46 100.0 30 .............................................. TAAAGAGGTTGCCGCTCTGTCATTTTGCTT 2878045 46 100.0 29 .............................................. CTACCTTAACAAAGGCGGGTTCTGTATCG 2877970 46 100.0 30 .............................................. CCCTAACGCAAGTTTCCAGATTGAAATCCC 2877894 46 100.0 30 .............................................. TGATCCTGGCAAGTACGTCCATAACCGTCT 2877818 46 100.0 29 .............................................. AATGGCCTTATATTGTAATGCTCAAACAA 2877743 46 100.0 30 .............................................. CAGGCGGTATATTTTCACGAAACGCAATAT 2877667 46 100.0 30 .............................................. GCTCATCTTTTTTGCGCCCGGCGTCAGTAC 2877591 46 100.0 29 .............................................. AGCTTCTAATTCGGCGGCAACTCTTTGCT 2877516 46 100.0 30 .............................................. AGGGCCGACAGTGATCCCAGGATTTCATCC 2877440 46 100.0 30 .............................................. GGGATGATGGCAAGGATAGCAATCCATTTA 2877364 46 100.0 29 .............................................. AGTTAATCTGTTGGTTAAAAATAAATTCG 2877289 46 100.0 30 .............................................. TATCAGGGGGTGAAAAAAAGCAGTGTAGTT 2877213 46 100.0 30 .............................................. TATTCGTCTTGATGTTCAGCGAAAATTACA 2877137 46 100.0 30 .............................................. AATACTTAATCACGAAGTCGTAGCAGTCGC 2877061 46 100.0 30 .............................................. ATCGGTATGCTGATGTATAAATTGTTCCTT 2876985 46 100.0 29 .............................................. CATGGGTATCTGAGATTAAGACTTTTACA 2876910 46 100.0 30 .............................................. TGATGTTGAAGAATACCAACGTGAATGGGA 2876834 46 100.0 30 .............................................. CAATTTTGTTAAGGTCAATCATAAATCAAT 2876758 46 100.0 30 .............................................. TGGATACCCGCAGTTTCATGATCACATTTT 2876682 46 100.0 30 .............................................. AGCAACACTTGCCGGGGCCGGTTTGTCGCC 2876606 46 89.1 0 G.....................C................A.T...A | T [2876562] ========== ====== ====== ====== ============================================== ============================== ================== 36 46 99.7 30 ATTGTTCCAAATATCAGTTGTTTAAAGATTGAAAGCAAATCACAAC # Left flank : GACGAAAATTTCAATGATGAGGATACAGAAAATACTATTGAATACAATATTGGCGATGAAGAATAGCTAACCGTTGATGAATGCGTTTAAATGAATACCGGATTTTGTGGATATTAGTATTTTTTGACCTGCCGACAGAAACAAAAAAAGACCGGCAAATCTACAGTAGGTTTCGTAAGGATATTATGAAGGATGGATTTGGTATGTTCCAATTCTCCATCTACCTGCGGCATTGCAGCAGTCGTGAAAACGCTGATGTACACATCAAACGTGTGAAGAAAATACTCCCACCTAAAGGTCACGTCGGTATCATGACCATTACCGATAAGCAGTTCGGAATGATGGAATTGTTCTATGGTAAGGAAGAGAAGGAGCTTCCAGACACCCCACAGCAATTGGAATTGTTTTAGAATTTTAAATCCGGAAGCCTGAGCAACCGGATTTTTTAATTCTAAATTTAAACATAAACAACTGATATTTAACGTTTTGAACCATGGTAT # Right flank : TTCTGGCATGGAAAGGTGCATATTTGGCGTCTGTAGCACTCCAAATGTGTGTAATCAGACTTAATGACAAATTACCGCAAAACAAGAGTGATGGATATTTTGCGAAGTTATTCTGCAAATTTTCTGCAAATAAAAAACCCCACTCGCCAGAGTGGGGTTAAATCATTGATTTTCAGGCTCCTGAGGCTGGGCTCGAACCAGCGACCCTCTGATTAACAGTCGTAGGGTCATCCTTATCGTTGTTTTGTAATTTTTATATATACTTGATTATAAGATATATATGAAATATTGATTTATCAATTTTAATCGATTTTTTGTTGTTTTTTGTTCATTTGTGTGAGAAATGTGTGAGACAATAATTTGCATTTTATGCGTTTATTACTTAAATTAGCATATAATTAAAAAAGTGTGTGAGACAAAATTAGCATTTACTCTAAAATAATCAATATGGCTGTTAAAGTAAATTTATACCTGGACGAACGGAAGATTGAAACAGGTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTTCCAAATATCAGTTGTTTAAAGATTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 7603673-7619567 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001403.1 Mucilaginibacter paludis DSM 18603 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 7603673 30 100.0 35 .............................. ATCAGCACACCCCATAGGCCAAATGTTATAACCCG 7603738 30 100.0 35 .............................. ATCGCGAGGTTAAATGACTTCTTTAGCGTTGTGGG 7603803 30 100.0 34 .............................. AATTGCCTTTTGCTATTTACCTTAACGGCTATTC 7603867 30 100.0 36 .............................. TGATGCTGGAGTTATCATCTACCCACGGGTTGCCTA 7603933 30 100.0 34 .............................. ATGAACTTGCCAAAGTATTCCCCGTAGCATCCTC 7603997 30 100.0 36 .............................. TTAACAGCCTAAATAGATCGTGGCCTTTCTCTTGCT 7604063 30 100.0 36 .............................. TTAGTTTACCAGTTCCATTACAGGCTTATGCAGCTC 7604129 30 100.0 35 .............................. TTATATGTCCAGTTTCTTCATGCTCGCATTTAAAC 7604194 30 100.0 35 .............................. ATTAACTTCGGCTTGCTGTATTCCTGGGCTACCGA 7604259 30 100.0 35 .............................. TCTTTATACCAATCAGAAGAGGTATTTATAACTGA 7604324 30 100.0 34 .............................. AATGTCATGTTTTTTTCTATTTCAGGGAACACTT 7604388 30 100.0 36 .............................. TACTGAAGTTAAGTCGGTACACATGCTGCAAAATCT 7604454 30 100.0 36 .............................. ATCCGAACACCTGAAAATGGCAGTGTTTGATCAGAG 7604520 30 100.0 35 .............................. TTGGCCAATATGCGCGGCAATTCCCGCTTAACTTG 7604585 30 100.0 35 .............................. TCGGTAAAACCATGAATGTCGCTGGCCTCTTTTGG 7604650 30 100.0 35 .............................. TACTTACAGCACTTAATAAGGCAGAATTGGCATTG 7604715 30 100.0 34 .............................. TTAATTGAGTTATATACATTAACTGGATTTAAGG 7604779 30 100.0 34 .............................. AATGTCATGTTTTTTTCTATTTCAGGGAACACTT 7604843 30 100.0 36 .............................. CAGTTACTGTGGGGGACGTTCCCGCCCCGGTTCCGG 7604909 30 100.0 37 .............................. GCCGCCGATCAACAGGGCCTGATCAATGGATCAAAAC 7604976 30 100.0 35 .............................. AAAAGAACAAATAAAGAAAGCCACCCCGGTTATGA 7605041 30 100.0 36 .............................. AATATAGTGATTAAGCAGATAAGGCATGAAGGAATA 7605107 30 100.0 36 .............................. ATCCCTGTGTTGCGAGATACGTGTCTAAGGCAGATT 7605173 30 100.0 35 .............................. ATTGGCAATGGCTCGCTACCATCACCCACATGAAA 7605238 30 100.0 36 .............................. TTGTGCACACCCGATGACTTTAGCAATTCGGCCCTT 7605304 30 100.0 34 .............................. AATGTATCCTTACTGATATTATATCCTTCATTAA 7605368 30 100.0 36 .............................. AAATATACTTCGTAGCGATAATCTTTTCCGAAGTTT 7605434 30 100.0 34 .............................. CTTTCAAAATCAGAATTATCCGAAGGTTTAACAC 7605498 30 100.0 35 .............................. TCGCTTAATTTAAAGCACGAGCAGGAGAATTATTC 7605563 30 100.0 36 .............................. CTATGAATCGTAAACCAGTAATTAAAAAGTCGTGGG 7605629 30 100.0 35 .............................. ATATTTTTGTATTGAAACAAATGATTTGGTTTCGG 7605694 30 100.0 38 .............................. TTATTAATAATCTACTTTTTTAATTCAAATAGCTTATA 7605762 30 100.0 35 .............................. CAGCCCCATATCTTCAAATGACTGGAATTGATCAG 7605827 30 100.0 36 .............................. ATGATGCCGAAAAAGGATTAGTCGATAATGCTCAAA 7605893 30 100.0 38 .............................. TTCCATGACATGCTAATGTGTTCGCAGGCGTTGCAAAA 7605961 30 100.0 35 .............................. AAAAGGTTCAATTCCTGGCAGCGATACATTCACCG 7606026 30 100.0 36 .............................. CGCACTTGAATCTATTGAATTTACCAAAAAAGAATA 7606092 30 100.0 34 .............................. AAAATAAAAACCGATGTTGATTTTTTTTGCAACT 7606156 30 100.0 37 .............................. ACAGTAATAGGGAGATTATTAGCCAGCATTGGCAATT 7606223 30 100.0 34 .............................. GGAATCGGCATAAACTGCACTGTTTTGGTTCCGG 7606287 30 100.0 36 .............................. TTAGACATATATCGTAGATATTCTGATTGTGAAGCG 7606353 30 100.0 35 .............................. CATACTATGTTATCCATTATCCGAATGAAAATGTG 7606418 30 100.0 37 .............................. TTTGGTCAAGGTTAGCGGCCGTTTCCAATGTTGCAAT 7606485 30 100.0 37 .............................. TAAGTCAAATTAGTAAGCGAACCCGAAGCCAGGCACA 7606552 30 100.0 34 .............................. ATAATTATTCTGCCTACAATAAAAACGCCCATTA 7606616 30 100.0 34 .............................. AATATTGCCCACAATCAAACACAATATTAAACAC 7606680 30 100.0 36 .............................. CCCTGTGTGGCCCCATTCAGTTAATTTACGCGATAT 7606746 30 100.0 35 .............................. TTTATTTAAAGGCAAAAACAATTCATGGTCATGAG 7606811 30 100.0 35 .............................. TTACCGGCTACCAACTAAACGTTTTCCCAAATGGA 7606876 30 100.0 36 .............................. TAGATATGGGAGATAACATCAAAGGTGAAGGGCACG 7606942 30 100.0 36 .............................. TTAATTACCGATTTAACCCTAATGTTTTCCATTTCA 7607008 30 100.0 34 .............................. TCGATCTGTTTGAACCCATTATATGAAGCATATT 7607072 30 100.0 36 .............................. TTATTTGATTTCACCCACGCATTGCCGGACACCCAC 7607138 30 100.0 35 .............................. ACTTACAAAATATGTACTTAAACACTTATTAGAAA 7607203 30 100.0 38 .............................. AGGTACTTCGGCTACATTACGCCCGGCACTACAAACCG 7607271 30 100.0 38 .............................. ATTTCATTGCATCCAATAACATCAAATCCGGCCAACTT 7607339 30 100.0 36 .............................. TTAAGCCCTATTTCTTATGTAATAAAAAAAGCCACC 7607405 30 100.0 36 .............................. ATAGATTCAAGTGCGTGATCAACGCTGCCAACTCTG 7607471 30 100.0 35 .............................. AATATACATAATAAATAATTATCTTAGATGCGTTA 7607536 30 100.0 35 .............................. TTGACTTTACATTCAAGTCTTTTTTAACGATCAGG 7607601 30 100.0 34 .............................. ACTTTTAGATTGACGCATGTTGAAAGTGTTTCAA 7607665 30 100.0 37 .............................. AAAAATGATAATTCTTTTTCTTTAGCTAAGTGCGCTA 7607732 30 100.0 35 .............................. ACCAAATTAAAAAAGAACACGTTGATTATGACCTG 7607797 30 100.0 35 .............................. TAGAGCAGGAGTTAATAAACCTGCCTGAAAAAAGA 7607862 30 100.0 34 .............................. CGATGCTAAAAGAAGTGGTACAGCAGCATCAAGG 7607926 30 100.0 35 .............................. TTTCGATTTGCTTTTTACTGCCAAAAGCGCAAGCC 7607991 30 100.0 34 .............................. TCGCTTATTGGTAGCCTAAAACGTACCGTGCAAT 7608055 30 100.0 36 .............................. ATATAAACAACTGCCTTTCTCTCATGGCAATAATGG 7608121 30 100.0 35 .............................. ATTAATTTGTCTTGTTCTGCAATAATCTTCTCCAA 7608186 30 100.0 35 .............................. AGCAAATAGAATCCGGGAATTATTATTGTGAAGCT 7608251 30 100.0 34 .............................. AATGCAAAGTCGCCACCAATTATAGCGGCGTCAT 7608315 30 100.0 35 .............................. GTATTTGCGCCCGGCCTGATGGCTCTATAACGTGA 7608380 30 100.0 35 .............................. TGTTAACATAAATTCAGGTTTTGAAGGATATGATG 7608445 30 100.0 35 .............................. ATATCTTTAATGCCGGATATGATTAGGCCTGCCCA 7608510 30 100.0 35 .............................. TATCGCTGATAAGCGAATTTGAGGCATTGGCTAAG 7608575 30 100.0 35 .............................. CATACTATGTTATCCATTATCCGAATGAAAATGTG 7608640 30 100.0 39 .............................. GCAACAAATGGACTATCATTTACGAGCGGCGCTACTGAC 7608709 30 100.0 35 .............................. GCCTGCAACTTTGCAGCTTCTAATTCAGCGGAGAT 7608774 30 100.0 37 .............................. TAAGTCAAATTAGTAAGCGAACCCGAAGCCAGGCACA 7608841 30 100.0 34 .............................. CTTGTGTTTTTTACCGTGTGGTAATTGGTTATTA 7608905 30 100.0 35 .............................. ATTAACTTCGGCTTGCTGTATTCCTGGGCTACCGA 7608970 30 100.0 37 .............................. TGCAGTAGGCTTGGGCTTAATAAACGAAAAAGGCGAA 7609037 30 100.0 34 .............................. TTATGCGGTTAAGTGCGATAAGCGACCAGTACAG 7609101 30 100.0 38 .............................. TTTTTAACCGTTCTAAACTCGCCAACTACATTAACCGC 7609169 30 100.0 34 .............................. AAAGATTTATTGGCAGCTGTTGGGTTCTTTAAAA 7609233 30 100.0 36 .............................. TAAATTTACACAATGGTTTTTAAAGCTCGCTACACA 7609299 30 100.0 35 .............................. TTATAATGAGCTTTTACGATTTACCAAAAATTAGG 7609364 30 100.0 35 .............................. CCAGAACCAAGACAATGACCTCTATGGGTTGCTGT 7609429 30 100.0 37 .............................. GCTATCAAGGCTGATTTGTTTTCAATAAGAAACTTGG 7609496 30 100.0 36 .............................. ACTACAAACTAATATTACCATTTTGCGAATCAACAA 7609562 30 100.0 34 .............................. ATGGTCGACGATTTAGGCTTTAAAAGTGTTGAGT 7609626 30 100.0 35 .............................. ATTAGCATTAAAGGGTAGCCAGGGCGGGATATCAA 7609691 30 100.0 34 .............................. TATACCCATTGCTGTATATAAGCTTCGGTTTTTT 7609755 30 100.0 35 .............................. CGAATATAGAAAACCAATTTAATCATGATAGATTT 7609820 30 100.0 36 .............................. ATATGGATAAAGCATGTTGATGAGGGTAAGGAGTTG 7609886 30 100.0 34 .............................. ACTTACAAAATATGTACTTAAACACTTATTAGAA 7609950 30 100.0 36 .............................. CATCGAATTACAATAACCCAAATAACGTATACGATG 7610016 30 100.0 35 .............................. TTTTAATTTAGACCAAATATCAGATTATTTTGAAT 7610081 30 100.0 37 .............................. TCATTATGAACGGCAAGGTAAGAAAGTTGCTTATATT 7610148 30 100.0 36 .............................. AGTTTTTAAATATAGCAGGAACAAGGGGATGCCCTG 7610214 30 100.0 35 .............................. AATATCTAATTATGAGCAAATAGACAACTTGAATC 7610279 30 100.0 34 .............................. ATTATAAATTGAGCGCCATCCATGTGAGAGCCTG 7610343 30 100.0 37 .............................. ATCGGAGAGGTTTCCGAAAGTGATTTTAAAGTATTTG 7610410 30 100.0 37 .............................. CATTTTTTAAAGGCCAGGGAGGTTTAGGCCGGGCATT 7610477 30 100.0 34 .............................. GCAGATAATGTAGCTCGCCTTAGCTTGTCTTTTA 7610541 30 100.0 37 .............................. TAAACCAATGATAACTACCAAAATCAGATCCAGAACT 7610608 30 100.0 34 .............................. TGGTTATTACGTAATGAGGCTATCAGTGTTTATG 7610672 30 100.0 36 .............................. AACACACGTAACTAAAGATGCTCAGGGCAATTATGT 7610738 30 100.0 36 .............................. TTGTATATCGGCCTTAGTATTGGTATGAAGTTGACA 7610804 30 100.0 36 .............................. TGATTTTAATAATCTGTTTAGTAATTCACATCTTTG 7610870 30 100.0 36 .............................. ATTTTTTGAGTACTATAGGCTTACTAATAGTAATTA 7610936 30 100.0 35 .............................. TTAACATTATCCAATGTTAGGCCTTCCGCTATTTC 7611001 30 100.0 35 .............................. TTGAACCAAAGTATATCCGAATGATAACCGTGAAT 7611066 30 100.0 34 .............................. CTACTTTCTTATCCTCGTTAATGGCTATAAAAAT 7611130 30 100.0 35 .............................. TGGGCTGTAAGGGGTTTTATACTTTCCAGAACGAA 7611195 30 100.0 36 .............................. GCCATGCGAGCCTCCAATAATATTAGCAGAAGATTG 7611261 30 100.0 36 .............................. CTGGTAAATACATCTGTAAGATACTTAACATGCTTT 7611327 30 100.0 36 .............................. CTTATAAAGTGACCTGTTTCAAAGTCATACATACCA 7611393 30 100.0 35 .............................. AAAGTACTGCAAAAGATTAGCCATAAAGCATGGCA 7611458 30 100.0 37 .............................. ATCGTCTGCCATTGTTCGGCCATTTGCGATTGCCCTA 7611525 30 100.0 35 .............................. TATTGCGGCCACCTAATGCCGAGGCAAGTCGTTTT 7611590 30 100.0 35 .............................. AATATCCGTATCAGTAAACTCCGCTGACGTATCAT 7611655 30 100.0 35 .............................. CGAAAAAGCAATACAGGAAAGCGCCGGGAAAATAG 7611720 30 100.0 36 .............................. AATATTGCCCGGCTGTAATTCTTAATGACGAAGTGA 7611786 30 100.0 36 .............................. ACGTTAGCCCATTTTGTTTTTACGGTTGCCCTGATC 7611852 30 100.0 36 .............................. AATATCTTTTGTATCGACCTTATGGCCTTCTATGAT 7611918 30 100.0 34 .............................. TGAATTTAACAAAAGACTCAGGAACCTCAATAAT 7611982 30 100.0 35 .............................. GGTGAACTCAATTGGTTGTTCTGGCAGATCTTTGA 7612047 30 100.0 36 .............................. CCGAATCCCGATTAGGCATTTTATAAGTTTCACTAA 7612113 30 100.0 35 .............................. CACCTACAGAACCACCGATTGTTAATTCGGAAGAT 7612178 30 100.0 36 .............................. TTCATCAAACCTATCAAAATCAAAGCCGCCTTCTTT 7612244 30 100.0 37 .............................. ATGGTATTTTTCAGGAAAAACTTGAAGCCTATCGAAA 7612311 30 100.0 34 .............................. AAATCGAAGCTGATAAAAAAGAAGCAGAGGCCGC 7612375 30 100.0 36 .............................. CGGGATATTCCAAGATCGGTATATACAACCGTCTTG 7612441 30 100.0 37 .............................. ATAGGGGGATTAGATAGCTGTTTGTAATTCTGTTTAG 7612508 30 100.0 35 .............................. AAAGAAGCTACTAAAAACGAAATATCAAAGTGGCT 7612573 30 100.0 36 .............................. GATAAGTCTGGCATCTTAGTTTGTTCTTTGGTTGCT 7612639 30 100.0 36 .............................. AAAATAGTTTCCGGGAGATCTGGGTTATCCAGCCAC 7612705 30 100.0 37 .............................. ATAATAATTATTAAAAACATTCTCATGAAAACCAACA 7612772 30 100.0 35 .............................. TAATACCTTGCATAACTATAAAAAAAACAATTCCC 7612837 30 100.0 36 .............................. CAATCACATTAGCGCGTCTCCAATTGTTTACAATGT 7612903 30 100.0 34 .............................. ATTAATCCGCGTGAAACTACCGTAGCTGAATATA 7612967 30 100.0 35 .............................. CCCGTTGGATAACTTTGATATTGTAATCGGCTCTG 7613032 30 100.0 34 .............................. TCGCTTGCTAACTCTTCAGCTTTTATCCTATCTT 7613096 30 100.0 36 .............................. TGAATACCAAACAGCGAAAATAGCCATTGCGCAAAA 7613162 30 100.0 35 .............................. AATATTGCCTTTAGCTGATTGGTCGTTGGTATGAA 7613227 30 100.0 35 .............................. TGAATGCAATTCTTGGCAACCCGTGGGTAGATGAT 7613292 30 100.0 35 .............................. AACACTTTCATTTGGAGATACTAAATTTACCTTTT 7613357 30 100.0 36 .............................. ATAAAATACGTTTGCCACGAAGTTTTTTAGCCTTAA 7613423 30 100.0 34 .............................. TGTTATGCGAAGCGTTTAATTTTTACCACCGTGA 7613487 30 100.0 36 .............................. AATTTCTTTGCCGCCAATTTCAAGTAACCGAGCCGA 7613553 30 100.0 35 .............................. AACACACCCAACCAGGATAACACAAGCTGGCTATA 7613618 30 100.0 34 .............................. TTGATTAGGCTCTGAACCTATACCCAAAAATGGA 7613682 30 100.0 34 .............................. TTCTACAAAAAACATTTTCCCAAATTCGTGAAGC 7613746 30 100.0 37 .............................. TTAGATAATGGCATAACGCCTTGCAATGGGGATACGG 7613813 30 100.0 36 .............................. TTGAGCGCATTTTGTTACCATCCTTGGCATTAGCGG 7613879 30 100.0 35 .............................. AAGAGATTAAAGTCTTTATTGTTGCCCATGTCCTC 7613944 30 100.0 35 .............................. TTGGGTCATTTGGTGATGGTGTGGCTGTTGTGCAA 7614009 30 100.0 35 .............................. GTAATCCTGATGCAGTCGTACCGGTTATTTTTCGG 7614074 30 100.0 35 .............................. ATAAAACAGCTATTGCCGCCTCAACCCCACTAATG 7614139 30 100.0 35 .............................. AGCATTAATAGCCTCGCCGGATACCCGGTATTGCC 7614204 30 100.0 35 .............................. ATGGACTGGCTCTTGATACCGCGTCTCAGGCGGCT 7614269 30 100.0 37 .............................. CTTGTCGGCTGTTAGGTAAAGAGAAGTGTACTTTTTG 7614336 30 100.0 37 .............................. TAGTCCAGCCAGAAACTATCTGCTTTTTCTGCTCAAT 7614403 30 100.0 35 .............................. ACAGACAACGCGATCGTAGTTGATGGCCATGGGCG 7614468 30 100.0 34 .............................. AAAGTAAACTAAGGATATGGAACCCATATACACC 7614532 30 100.0 35 .............................. AACGTCTAACGAAGCTTTGTTTTTAATTCCCATTT 7614597 30 100.0 37 .............................. TATGTATTTCCATTTTTATTAGGTAATGAGATAACGA 7614664 30 100.0 37 .............................. TATGTATTTCCATTTTTATTAGGTAATGAGATAACGA 7614731 30 100.0 35 .............................. AAGAATTGATACCGAAAAAACTGATTGGAATGGTG 7614796 30 100.0 35 .............................. TCAACTTGAGGTTCTAACCAACTTACTTTATTGAA 7614861 30 100.0 37 .............................. AGGTTAGCCCCGCCAAGGTTAGCGTCGCCAAGGTTAG 7614928 30 100.0 35 .............................. AGCATAATATGCACATTTTCTCTATTACAGTAGGT 7614993 30 100.0 36 .............................. TAAGGCAGCAAACGAACAATTAAATAATCTCCAGTT 7615059 30 100.0 35 .............................. TTTCATCATTGTCTTTAACCTCTTTAACAAGCGCT 7615124 30 100.0 34 .............................. TTAATAGTTACTACAATGTGATGCGGTGCTCCAT 7615188 30 100.0 35 .............................. AGGTTAGCCCCGCGAAGGTCAGCCCCGCCAAGGTC 7615253 30 100.0 34 .............................. ATCAACTAAACAATTACTGGCTTATGGGTTCGGG 7615317 30 100.0 37 .............................. AATGTCCCATTTGCTCCGGCAATCAAGGTTAAACTTA 7615384 30 100.0 35 .............................. ACGTTTTCTTTTCAAACTTATCAAACGGAGTATTT 7615449 30 100.0 35 .............................. TTCTTTAACAATGGCATCACCGAATAAAAGGCATA 7615514 30 100.0 34 .............................. AAGAGCGTATAAAGTCTCTTCGCGATAATCTTTC 7615578 30 100.0 35 .............................. ATAATACTAAGCCGCGCCAATCGAGGCCGCAAACA 7615643 30 100.0 35 .............................. ACCGATGGCAAGCCCCCTGTAGATGACCCAGCTCA 7615708 30 100.0 36 .............................. AACATTAAAAACAGGCTCAAAATGGGCGTAATGGCC 7615774 30 100.0 35 .............................. ATGAACTTACAAGCCCAATCATTTTTTAAAATACA 7615839 30 100.0 38 .............................. ATATTTAACAGCAGCAGAAACCGGGCTGCCTATGGGTA 7615907 30 100.0 34 .............................. AAATTTAGGTAGCAATCCTTCTTTTTCATCCGGT 7615971 30 100.0 37 .............................. AGCTCAAGCTCTATCCGTAAATGAAAAATCAAAGTTG 7616038 30 100.0 37 .............................. AGAGGCGCGTATCGAAGTAACAGAACAAAAAAACAAA 7616105 30 100.0 35 .............................. AGGGTACAGATATACACTTCTAAATAATTTAATAT 7616170 30 100.0 34 .............................. CCGTTGGCGCTGTAGCTCTGGCCCGCTAATCCAT 7616234 30 100.0 36 .............................. AACATCCGGCTATCTGTAGCCACGTAAGCGCCTTTG 7616300 30 100.0 35 .............................. AGGGGTGCCGTGTAATTCTTTGTTCGGTCCCGTGG 7616365 30 100.0 37 .............................. AAACGATAATATGACACAGGAGGAAGCCCTAAACCGA 7616432 30 100.0 36 .............................. TTAATTATTCGTTCGATATAGTAGGATGTTTGAGCC 7616498 30 100.0 36 .............................. CGCTGATGATAAGGTAGCATTTACCGGTTCCGATGG 7616564 30 100.0 37 .............................. TTTTTAAGACTGCAGTATTTTCGCGCAGGCCTAACAG 7616631 30 100.0 35 .............................. GTTCGCGCAAAAGATAGCCGGTACATGGACAATTG 7616696 30 100.0 38 .............................. ACGCTCATGCTAACGAGGTTGAGAAATTCTTTTTTGAT 7616764 30 100.0 34 .............................. TTGCAAAGCCGGTAGCCAAAACGAGCGCCAGCAC 7616828 30 100.0 35 .............................. CAAGTTTGACCTTGTGGCTTATCCTATCGAATCTA 7616893 30 100.0 36 .............................. ACCACCTTCGTTAATTGCTAACTTCTTTGAAGCCTT 7616959 30 100.0 35 .............................. ATGCACCTGTACGTCAACGGATAGACTATGAAGCT 7617024 30 100.0 37 .............................. TACCTACACGCCGGGCCAGTCATTCACAGCCGGGGCC 7617091 30 100.0 38 .............................. TACAGAATTGTACTGCTACTTGCAGTTCCTGTACCCAA 7617159 30 100.0 36 .............................. AAATAAACCTTGAAACTGGTGAAGAAAAAACTGAGG 7617225 30 100.0 36 .............................. CGATACGGGCCTGTACGGACCTTCTACAACTGTTAT 7617291 30 100.0 41 .............................. CAAGTTTACGGGCCATATACGGGTACAACTTTGTATGCAAA 7617362 30 100.0 37 .............................. ATGTGCTATCATAGCGTAATTATATTAAGTTTAACTA 7617429 30 100.0 35 .............................. AGGAATTAGGCGACAAATCAATTGATATAGTTGAA 7617494 30 100.0 37 .............................. ATTAATGGAACAGGCTTCGTAAAGTCAACTGGAACAA 7617561 30 100.0 35 .............................. TTTAACCTGGTGGTGTTGGTATTGGTGGTATTTCA 7617626 30 100.0 39 .............................. TCGTTAATTGGAGTTGATCTGATTTGAACGCTCCCAACG 7617695 30 100.0 37 .............................. TTGAATGGTACAATTCCATTTCCAATTCCTATCCAAG 7617762 30 100.0 36 .............................. CAAGGCAGAGTATGCGCAAAACACGGTACGACCTAA 7617828 30 100.0 37 .............................. AACCATATTGATCCATCCATCGACATCCTGTAAAGTC 7617895 30 100.0 34 .............................. AACGTACTTTCAGATATATCTTTTTTTGTTCGCT 7617959 30 100.0 35 .............................. AGCGAAGACACGGCGGCCCTGCTTCGGGAATACGG 7618024 30 100.0 35 .............................. TTGATTTGGGCCGCCTTTTGGAAGATATGTTTTAC 7618089 30 100.0 36 .............................. ACAGATGGAAAACCACCGGTAGATGATCCAGCGCAT 7618155 30 100.0 36 .............................. TTCATACAAAACTTCGATGGATCGCTTTTAATAAGC 7618221 30 100.0 37 .............................. ATCATCAAATTTATCCATCCGCATATCACCCTTATTC 7618288 30 100.0 36 .............................. ACGATTTCAGCCTGGGCCATATCCTTTTCAAATGAT 7618354 30 100.0 36 .............................. TTCAACCTAACCTTATCACAATTATGAATCCTTTTA 7618420 30 100.0 35 .............................. AACCTAAGTTCCTGAACGTCATCAATCAATACTTT 7618485 30 100.0 35 .............................. TGGGAATACTTTTGGTATAACCTATGCTATTACCA 7618550 30 100.0 34 .............................. TACATCAGGAAGCCTGGGCCGAACCGTAGCCACG 7618614 30 100.0 35 .............................. CTGGATCAAAAACAACATCTTCGATAAAGAGCAGC 7618679 30 100.0 39 .............................. ATAAAGATATATTGCCCGTTCTTACATTTTCAACAGCCG 7618748 30 100.0 34 .............................. TACGTAATAATATCGGCGTACGTCCTTACCGAGG 7618812 30 100.0 38 .............................. TTGGTCGCTGTTGCTAATATCGTTAACGACAAAATAAA 7618880 30 100.0 36 .............................. AAATATATAGCTGAGGAAGCTACAGGATTAAAGTTC 7618946 30 100.0 34 .............................. AAAATTACATTAAAAAAGTATTTGATGTTGCTGG 7619010 30 100.0 35 .............................. TTGATATGATAGCGCATGAAAATAAAGCTTTCTAA 7619075 30 100.0 36 .............................. ATCCGGAAGTAGCTAACATTATTACCGCGCTGATTC 7619141 30 100.0 36 .............................. TTTGTCTTTTGAAAATTGAATTGTGAATTGTTTATG 7619207 30 100.0 37 .............................. AACACAGCAGATACTGGCAGAGCATTCCCGTTTGTAA 7619274 30 100.0 36 .............................. ATATGCAGATGTTGAGTTTATGCATGCCAAAATCTA 7619340 30 100.0 35 .............................. ATAGCTGCGACCTTCCAGATCAATGACCTTGCCCG 7619405 30 96.7 35 .......C...................... TTGGTTAACGCGGCTATTGTGTCAGCTGACACGCT 7619470 30 96.7 38 ..C........................... TGCTTGGCAGCTGCGAATCCAGCTCTGCCTTACTGATG 7619538 30 80.0 0 .........CCT....C...C.......C. | ========== ====== ====== ====== ============================== ========================================= ================== 243 30 99.9 36 CCTTTAATCGTACCATGTTGGAATTGAAAT # Left flank : GGTAACATGAGGCAATTAATGATAAAACTATGTATGTAATATTGGTTTACGATATTGGCGAAAAGCGCGTTGGTAAAATGCTGAAACTATGCAGGCAATACCTAAACTGGATCCAGAATTCGGTATTTGAGGGCGAAATAACACCGGTGAAGCTGAAAGAACTGTTAGCTAAATCGAAACTGATTATTGAGCCTGAGACCGACAGCATTATTATTTTTAAAAGCAGGGAACAGAAATGGCTTGATAAACAGGTGATAGGAGCGGAGCGCAACACGCTTGATACGATACTATAAGTTGTCGGTGAGATGACGAAGATGGTTCTTTGACGTATTGAAAACTTATTTTTAGCAGTAAAAGCAGCCCAGAGCCCTATTAAAAGCGGTTGTCGGTACCCCGGTAAAAACCGGTTATTGCACAGCGACTAATTTTTTATCAAATATCCGTGTGTTAAACGCAGTTTAAGCCTATATTTGAGCATGTTTTTAGCCGTTTTTTAACGG # Right flank : TCCCAATCAAAAATTAGGCAAAACCGCATGCTCACCACGTCCAATTCCCCTAAACCTTATCCGTCGACTTCCGCACAATCAACTCGGTGCTGAACATCTCGGTTTCAAACTGGGTGACTGGTTTTTTACTTTCAATTAGCTGGATCAGCATTTCGGCTGCTTTTTGGCCAATTTGATAAGCGGGCTGGCTTACCGCGGTTAAGGAGGGTTTAAATAATTCGGCAACATCGGAGTTGGTGAACCCGGCGATTGCGATGTCTTGCGGCACCTGTAGGCCTTGTTTTTTCAGTGCGGATAGGCAGCCGGTACTCAGCTTGTCGCCGCCGATAAAAAGGGCGTCGGGCCGGTCGGGCATAAGCGCCAGCTGTGCTATCGCGGCATCGGTTTCTGCCTGTATCATCCCACCATTCTCGCAATAAATGATATATTCGGGCTTGCAGGGTATGCTATACAGGTCGAGGGCGGCAAGGTAACCTCTCAACCTGTCTTTGCTGGTAGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATCGTACCATGTTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //