Array 1 728-362 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZQ01000020.1 Streptococcus halichoeri strain S186 NODE_20_length_34340_cov_88.636746, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 727 36 100.0 30 .................................... AAGGTTATTATACTATCGAAAAACAGATGG 661 36 100.0 30 .................................... CTTCTGTACTAGGTATTAATAATCCTTGGG 595 36 100.0 30 .................................... CATTGTGGCTAAGAAACGAGGAATGCGAAG 529 36 100.0 30 .................................... TAATCAAGTCAGAGGAATGTTGCATACGAG 463 36 94.4 30 .T............C..................... GATTGGTACGAAAAGAATAAAGAAGGCCTT 397 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 95.8 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AACTAGCAACAGACCAAACGTTAATCTCTCGAAAAGTCCGTTGAAGCATCCCAGTAAGCAGTAAAAACTGAGAATATAAGAGCATATAAATTGCTTTGGGGATCGATACAGTGTCTTAGACCATAGTTCAAAGCAAGTATTTGTCATCCCCCGAATAGACAGAAAAAAAAGAGTCACGCTATCCAATCGTTCATATTTCTCCTGATAAATCGATTGCTGCCATCAATCAAGCCAAGCATTTGGAATACAAAACACCAGCCAAATGCTAGCATAGCAGCTGAGGAATCAGAGATTAGAGGCTTAATAAAAATTTTTGAACCTAAACTGAAAAGGTACTGACGATTAATCAGCCGACAACCATGATAGTTAGCCTTCTTAACGCATTGATTTCGCAAGAATTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : GAAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAATGTACCTTTGTCAATGATGTGAGACCAAAACAGGGATTGAAAGAAACTGAATATGCTATTCTCTAGAAGGAGCTAGCTGCTTCTAGTTTTTTTCTTGTTTCGATGGGTGAGAGCCAGTCAAGGGTCTGCATGGGTAGTCGATTGGACTTGTAGAGGTAGCGCTCCATTTGCTTAATAAGATCGTCGTAGGAGTAGAATTGGAGATGTTGGTAGAATCGCATGTTGTCATTGCGATGACTCCTTTCGACTTTTCCATTATGTCTTGGCGTCCTAGGTCTGATACACTTATGTTCAATGCCGATCT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 31313-31613 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZQ01000022.1 Streptococcus halichoeri strain S186 NODE_22_length_31704_cov_73.369921, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 31313 36 100.0 30 .................................... AATCAAAATTTCTATATCACTTTTATCAGA 31379 36 100.0 31 .................................... CTGTCACTATCACCGCTAACAGCGAGCGTCA 31446 36 100.0 30 .................................... CGCTATCTTTATATCTTGGTTTTTCGTTAG 31512 36 100.0 30 .................................... ACGCAAGCGTGATTAATGCTAAGCGAAAGG 31578 36 86.1 0 .............................TTG..CG | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 97.2 30 GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : GCTATCGTTCGCGGGGAAGGGCTCACGCGGATGAAAGGATGTAAATGTTCCTTTAAAAGCTATGCTGTGCTTAAAACCAGTCAGATAGTTCAAGTTAGCCAAATTTAAAGAATAGTGATGTGATAGGTAAAGGGGAAATGAGTGAGGCGGACCGTAAATTAGGCGATTTTTACTGTGCTTATCAAGGTAAAAATCGCTCATGCTCCGCCAATTAACCGTAGAGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTCCGCCTAGAAATTAATCTGAGAAAGCTGAAAAGCAGGGCAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGTTTTTGCCGTATAATAGTGCTATGAACGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], // Array 1 140802-141101 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZQ01000004.1 Streptococcus halichoeri strain S186 NODE_4_length_141280_cov_81.986879, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 140802 36 100.0 30 .................................... AAACTAGTAGTGCCAAAGTTTGTGGCGGAT 140868 36 100.0 30 .................................... TTTGCTTCTTCAGCAAGCTCTATTGGCACT 140934 36 100.0 30 .................................... AAACGACAACACACGATCTAATGAATTAGT 141000 36 100.0 30 .................................... AAACAAAAGTGGAGCAAGAATTTAATAAAT 141066 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.1 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAGATTACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTATTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTTCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAATGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAGCTTTTCAAACCCTCAAAAAGAAAAATCGCCACGTTAAGTAGCGATTTTTCCCTTTTGTGAGCCTCAATGAAACGTCAAAGCGTTATAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //