Array 1 12-239 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKAX01000736.1 Corynebacterium sp. BCW_4722 PROKKA_contig000736, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 37 .............................. AAGATGAACTTTGAGAGAGAATATCTTCTAATATAAG 79 30 100.0 34 .............................. TCTCGCAAGCGTTATATTTTTTTGTATGATTGAT 143 30 100.0 37 .............................. GCCTTTGTTGTGCCTATTTATGCTTCTTTTGTGGCTT 210 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 39 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : TTATCGGCGGCA # Right flank : ATGTTAAAAATCGTGTTGATGCTTCTTTGAGCCTTGAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 301-9 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKAX01000897.1 Corynebacterium sp. BCW_4722 PROKKA_contig000897, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 300 30 100.0 34 .............................. TCAAGATATCTATCTCATTACGCAAGACTTAACT 236 30 100.0 37 .............................. AACAGACAAATTTGAAAAAGCTTTTAGAAGATCACGG 169 30 100.0 36 .............................. CAAAAATCATATCTTCGCCAGTTTTGACGGCAAAAA 103 30 100.0 35 .............................. CGTTGCTTAGAAGTAGTCTTTTTGTTGATACCGCT 38 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CACTGCTTCATC # Right flank : CAACAATTC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [10.0-11.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //