Array 1 2628-499 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORYM01000393.1 Xanthomonas fragariae strain ICMP 20572 isolate ICMP 20572, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2627 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 2567 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 2506 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 2446 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 2386 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 2326 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 2266 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 2206 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 2146 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 2086 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 2026 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 1966 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 1906 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 1846 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 1786 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 1726 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 1666 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 1606 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 1546 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 1486 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 1426 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 1366 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 1306 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 1246 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 1186 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 1126 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 1066 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 1006 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 946 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 886 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 826 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 766 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 706 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 646 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 586 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 526 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AAATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAGGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //