Array 1 12726-10990 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDQ01000049.1 Streptomyces triticisoli strain NEAU-DSCPA1-4-4 scaffold49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12725 29 100.0 32 ............................. GTGTTGCCGGGGTCCGCCAGGGCCGGATTCGA 12664 29 100.0 32 ............................. ACCAGGCAAGCCAGGGTGACCGCCGCCGATGC 12603 29 100.0 32 ............................. TGTGAAGTTGTCTCGCTGGTACGACCCGTGTA 12542 29 100.0 32 ............................. TCGCCGACCTCGTGGTGGAAGCGCGCGATGAG 12481 29 100.0 32 ............................. TAGACCGCTCGTGTGGTCGTGGTCTTCTACAA 12420 29 100.0 32 ............................. GCGGACAAGACCGGTGTGGTGAAACGGGTCCG 12359 29 100.0 32 ............................. CCACCGCCCATTAGCTCCAGATTGGCGTCTCC 12298 29 100.0 32 ............................. CAGTTCGTGACCCAGGCCAGGGTGTTGACGGT 12237 29 100.0 32 ............................. CAGTTCGTGACCCAGGCCAGGGTGTTGACGGT 12176 29 100.0 32 ............................. GCTGCGGGCCCGGCCAGGAGCTGAGGGGGATG 12115 29 100.0 32 ............................. TCAAGCCACTGGGGGCGGACATGGAAGTGAAA 12054 29 100.0 32 ............................. TCAGCTCCCCCGTCACCGCGGGGAATTCAGTT 11993 29 100.0 32 ............................. AAGCAGCGGTTCGTCGGCACTGGCCTGTCGGT 11932 29 100.0 32 ............................. TCACTCAGGCCCGCAAGGACCGGGACGCTGGT 11871 29 100.0 32 ............................. TGGGCGTCGGCTCGTTCGGTGCCGTCGACCTG 11810 29 100.0 32 ............................. TCACTCAGGCCCGCAAGGACCGGGACGCTGGT 11749 29 100.0 32 ............................. TGGGCGTCGGCTCGTTCGGTGCCGTCGACCTG 11688 29 100.0 32 ............................. TCACTCAGGCCCGCAAGGACCGGGACGCTGGT 11627 29 100.0 32 ............................. TGGGCGTCGGCTCGTTCGGTGCCGTCGACCTG 11566 29 100.0 32 ............................. TCACTCAGGCCCGCAAGGACCGGGACGCTGGT 11505 29 100.0 32 ............................. GGGAGCGTGCCGGCCACGTACCAGTACCAGCT 11444 29 100.0 32 ............................. GCGACGCAGGCGTCCATCGACAAGGCGGCCGG 11383 29 100.0 32 ............................. TGGGGCTCCGATAGCCGAAACTTTGGCCGCTA 11322 29 100.0 32 ............................. GGCCACGCCATCATCTACGGCGACCCCAAGGG 11261 29 100.0 32 ............................. AGCGTCCACGTGTTCGCGGCGACCGCGAGACT 11200 29 100.0 32 ............................. CGTGCCTGCCGGGCCATCATCCGCCCGCCGCT 11139 29 100.0 32 ............................. GCGCCCACGGGCGTGGTGTGGCTGTCCGACGC 11078 29 96.6 32 ..............T.............. ACGCTGTCAGGGTCGGTGGGCGGCTGACCGGT 11017 28 86.2 0 ......A..............-..T...G | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCGGCGGAACCGATGATCACGACGCCTACGACGACGTGGAGCTCTCCTGGTGACCGTCATCGTCCTCACCAACTGCCCACCCAGCCTGAGGGGTTTCCTCACCCGCTGGCTCCTCGAGATCTCCGCCGGTGTCTTCATCGGCAACCCGTCCGCCCGGATCCGCGACCTGCTCTGGGACGAGGTCCAGCAATACGCCGACCAAGGCCGTGCCCTCCTCGCCCACACGACGAACAACGAACAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGGTCGACCACGAGGGCCTCACCCTGATCCGCCGCCCGAACGCCCAGAGCTCCTCGAACGCCGCGACCACCCCACGGAAGGGCTGGAGCAACGCGTCCAAGCGACGGCGGTACGGCAGGAGCCGATGAGCGCATCCATGCCCCTTATCGACGCTTTGCCGGAATCGGTGAAACTCATGAAAACCACGGCACCTGCGCCGTAAACCCGCAGGTCGCGCAGT # Right flank : GACGCGCAGGCCAGGGCAAGTGAGTGAAAGCAAGCGCCCCGCATCGGAGTTGATCGTTGCGGGGCGAGTCGTAAGGCGTCAGGCCTGGGCGGCGTACGAGACGAAGCCGTTCCACGCGGCGGGGGAGAGGGCGAGCTGGGGGCCTTGCTTGTCCTTGGAGTCGCGGACGCGGACGGCCTCGACGCGAGCTGACGCCTGCCAGGAGACGGCTACTTCCACACAATCGTCCCCCTCGGAGCCGCTGTAGCTGCTTTTGAACCAGGCCAGTTCGGACGTGCTGCTCATGGCGCTCCTCGCAATCGCTTGAGCAAGCTCACGGAGTCATCGGGGGTTAGAGCCTGCGTGCGAAGTTTCGCATACCGCTGGTGAAGAACGCTGATCTCTTTCCGGTCGGTGATGAGCCGTCCGTTTTTCTGTCCCTCCGAGTACCCGAACCACTGGTTCTCCGGCGTCTCTGCCAACCGCATCGGTCCATCCAGCCCAGCATGGACCGGCCGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 22415-23845 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDQ01000049.1 Streptomyces triticisoli strain NEAU-DSCPA1-4-4 scaffold49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22415 29 100.0 32 ............................. CGAGAAGCAGATCGCCGACGCGGCTGAGGCGC 22476 29 100.0 32 ............................. GATTGCTGCGGCCACGGTGTCGGGCCAGTTCA 22537 29 100.0 32 ............................. TGATCACCCGGCCCAAGACCGTTCGAGCCGGT 22598 29 100.0 32 ............................. GACAAGCTGTTCACGTCGTGGTACGGGTTCCA 22659 29 100.0 32 ............................. GGTGTAGATCTGGGCGCCATCGACGGTGGTGC 22720 29 100.0 32 ............................. GGCGAGACGCTGAAGGCCACCGAGTCGGGTCT 22781 29 100.0 32 ............................. TCCGGCCGGATGCTGACGTATCCGCGGCCGAC 22842 29 100.0 32 ............................. GTGACGCTGCCGCCGGCGGGCTCGTTGAACTT 22903 29 100.0 32 ............................. TCGGTGCGGGACGGCTTCAAGACCGCCTGGGA 22964 29 100.0 32 ............................. AGGAAGTGGACCGCTGGCTACGCGCTCGGCTC 23025 29 100.0 32 ............................. GCGATCGTCTTGTTCCCGGCACCGGGCTGCGG 23086 29 100.0 32 ............................. GAGCGGGCAGTGACCGGCCCGACGTAGTACTC 23147 29 100.0 32 ............................. CCGCCGCCGGCCAGGCCGCCGTCGGCGAATCC 23208 29 100.0 32 ............................. TGCAACGGCTGCGGCTGCCGTTGCGGCTGGGT 23269 29 100.0 32 ............................. ACCCCGCCGGCTCCGCGCCAGTCTGGAACTCT 23330 29 100.0 32 ............................. GACACGTGCTCCCCGGGCCGGTACCGCCACAC 23391 29 100.0 32 ............................. TCATCTCGAAGAGTAGACCTATGCGCCGTAGT 23452 29 100.0 32 ............................. CCGCCGTCGGCCAGGCCGCCGTCGGCGAATCC 23513 29 100.0 32 ............................. TGGGCAGCGACCATGGCCGCGCTGCCCGCCAG 23574 29 100.0 32 ............................. AGCGCGTCCTGTACCTGCAGGCGCATGGCTCC 23635 29 100.0 32 ............................. AAGCAGCTCAAGGACCTCGCGAAGCAGCGCGA 23696 29 100.0 32 ............................. GGCCGCGGCGCGGTGCCGGGGTGGTTGACCTT 23757 29 100.0 32 ............................. ACCGCGGTCAACGGGCCCGAGCGGATCAAGCT 23818 28 86.2 0 .....................-C.T...G | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TTTCCAATGTCATGCACACCGGCCAGCCACACCACCAGCCGGCGTGCATCCGCCTCCCCACCGGGCAGCGCACCGGCGATCAGTCTCCGCACGGACAGCGGTAGCCACTTGTCCCACAGCCGCCCGGCCACGGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCATCCGTCGGAATCACGCTCGTGCTTGGCCCACACGCTCAACGCCGGCCTGCTCAGCCGGGCGTGAAGCCCCACAGGGGCACCCCCCTCGCCTGTCATGCCAGATACATACAGGATGTAAGTGAAACGTGAGCTCAATATGAAGAAAATGGGGAGGACCTGCCGCCGGTTCAACCCAAGTCACAGACACCGACACCGAGGCGACCCTAAGGTTGGATCTTTGACCAGGCCTCCACGACAGGAACCCGGAGGGGCCATATGCGCCTTTTGCCGGACTCGGCGAAACTCATGGAAACCACGGCACCTGCGCCGTAAACCCGCAGGTCGCGCAGT # Right flank : GGTGACGAAGTGGCGGTCCTGTCCGTCAACAGCGGGCTCTGCCTGGTGCCGGAGTCGGAGGAGCCCGACTAAGGACGGGGCCATACGCGACTGACCACGCTCATCCGTCCTTCCCCCCTTCCTCCGGGGAAGGAGAAGAAGCCGTCTCATGCAGACTGGTGGTCGAGGTAAATGGCAAAGACGCCGTGGGCTTCCTTCTCGGGCGGGTAGATGTCGCGGCAGGCGGCCAGCAGCTGGTCACGGGTCATACCGGGTTCGCCGATGGCGGTGTTGTCCTCGGCGTCCAGCATCTCCTCGAAGGACCCGTACTCGTTGAGGGCGGTGATGCGGGCAAGGAGAGTATCGTCACCGGAGTTGAACCGCAGCCGGTCCCCGGCGGCCATTTTGCGGATCTTGGCATAGCCGACGCGGATCTCGATGGCCTCGGATCCGGCCGCGATCAGGTCGAAATAGGGCCTGCGGATATTGAGCGAGTGCTCGACGGACGACGGCGGGGTGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //