Array 1 2299413-2298662 **** Predicted by CRISPRDetect 2.4 *** >NC_011837.1 Clostridium kluyveri NBRC 12016, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2299412 30 100.0 36 .............................. AAGAATTATTAAAAAGAATAAAAATGCATATCCTAG 2299346 30 100.0 34 .............................. GGAGTACCAGACAGGATTGTTTTAATACCACAAG 2299282 30 100.0 36 .............................. AACATGAGAAAATAAAATGTTGATTAATATAGGAAA 2299216 30 100.0 36 .............................. TTAAATTTCCTCCTTATAATTCCATAATCTTTGCTG 2299150 30 100.0 35 .............................. ATCTATAAAGAATAGAGGAATTGATGGGGATACAA 2299085 30 100.0 37 .............................. CTAAAATACTACAAGGTGATATTCAAAAATATAGTGT 2299018 30 100.0 36 .............................. AGAGCTGCCAAAATGGTTAAGTCCTCTTACTAAAAA 2298952 30 100.0 35 .............................. AAGATTAAAAACTTTAGGTAAAAATATTGGTAATT 2298887 30 96.7 36 ......T....................... AATGCTTATGGATATTTGGCTTTTCAGGCAGTATAA 2298821 30 100.0 33 .............................. GAACACAATTTTATAAGGTTAAGAAGGTGGTTG 2298758 30 100.0 36 .............................. CCATTTTTAATCCTTAAAGATTTATCTTTACTGCTT 2298692 30 80.0 0 ................AT...A.AAA.... | C [2298670] ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.1 36 GTTGAACCTTAACAAGGATTGTATTTAAAT # Left flank : AAGGAGCTTTTGTATATTTCGACCCTCCATATGATCCTGTATCAAATAGTTCGAATTTCACTGGCTATGCTAAAGGGGGATTTAATAGGGATGAACAATGGAGACTAAGAAATGTATGTGATAAATTAAATTCCAAGGGAATTAAGTTTCTACTGTCTAATTCTTCAACAGATTTTATTTTAGATTTATATAAAGATTATAATACTAAAATAATACAGGCAAAACGCTTTATTAATTCTAATGGAAATAAGAGGGGAGAAATTGACGAGGTTCTGGTGAGAAATTATGGATAATATATTTAAAAATAAAAAGAAATAGTTAAATATTTTTCCAACCGACTTCTAAAATAAAAATACCTCTATTCATTTAAATACAATGTTTGAGGCTTTTTTTATGATGATTTTGAAAAATAAAAAACGGTTGGAAAAATTTCGAACAAACTCTTTATTGCCAATGTATTTAGGGTTATAATAAAAATAAAGAATGGCTAATTTACATTG # Right flank : ATGATTTTGATACAGCATGGAAGACAATATTGGAAACCTTTGAAGTAGAAATAGTAGAACTGCTTTTTCCAGAACTTTTTTGTGAAATAGCATGGGAACTTGGAACAGAGTTTTTGGACAAAGAATTAAATGAAATACAAAAAGAGATATTTGATAAAGAGAGTAGTGAAAAAATAATTTCGGATAAAATCATAAAAACCAAATTAAAATGTGGGAGAAGTAAAATACTATTTATACATGTGGAGGTACAAAGTTACAGCAGTGGATATGAAGTTTTTGGGGAGAGGATGTTCAGATATTTTTACAGGATATGGGATAGATTTAGATATAAATATGATGACAAGTCGGAAATAGTGGCAGCAGTAATCTATACCTATAAAAGAGAAAGAGGAAAAGATAAAAGATATGTATATAAATTGCCGGAACTTTCAGAAGATGTACTTGTATATAATTTCAGGACTATGGATGTTGAACAAATAGAACTTGAAAGTATAAGGAAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACAAGGATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2755269-2754450 **** Predicted by CRISPRDetect 2.4 *** >NC_011837.1 Clostridium kluyveri NBRC 12016, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2755268 30 100.0 36 .............................. AATCTTAACAATATAGAAGTAGAACTGTGTAAATAT 2755202 30 100.0 36 .............................. CAAAATACCGAAGGGGACATTGGTCTTCCTCGGAAA 2755136 30 100.0 35 .............................. AAAGGTATGCTATATACATAATTCCCTCTGCAATA 2755071 30 100.0 36 .............................. TGATTTATCCAGATGAATTTGAATTAGATGAAAATA 2755005 30 100.0 36 .............................. AGAAAGGAGTGTTGGTGATACAAAGTGATTTATAAG 2754939 30 100.0 36 .............................. AAATTAAAAGTAATGGCCCTAGCGCCGCAGCTATCC 2754873 30 100.0 36 .............................. TTTAGATAGAGGAAATTATATTGTTATTCGTAAAGG 2754807 30 100.0 35 .............................. AAATAAGTAATGCATATTGATTCATCTATTTATCC 2754742 30 100.0 36 .............................. TCTACAGCTTGTTTGTTATCTATTACCAGTACATTA 2754676 30 96.7 36 .......C...................... ACAACTATCTTCTTTTGTTTTATGTATTCTTTTATA 2754610 30 96.7 35 .......C...................... GAAAGGTATAAGGGAATTTGCGTCTATAGCATATA 2754545 30 96.7 36 .......C...................... TGCATTGCAATATTCTGGAGCATTGGTAAGAAACTC 2754479 30 86.7 0 .......C.........T..A......G.. | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 98.2 36 GTTGAACTTTAACAAGGATTGTATTTAAAT # Left flank : TTAACTACTTTAAGTACAAATACTGCATTGTATCCTTGCTCTATATACTTTTTAGCTATTTCTACTTTTTCCTTAATTGAGGGTTTGATTTTTTTATTAAATCTCTAAGAATTGCTATTTCTAAATCTTTTTCTCCTAACAATTTTTTTAGATGATCATTTTCTTTTGTTACCTCTGTCAGCTCATTTTCAAGTTCTTTTTCTCCCTCAACTAAAGCTTTTCTACCAGGCTTAATTTTAATCTCATCCTTATCCTTAGAATTCCTTATCCACGTAAATATAGTTGATTTTGAGAGCCCATGTCTCCTTGATACCAGTGAAACATTTCCTACTTCTTTCACTTCTCTTAATACCTCTTCTTTTAATTCTTTCGTATAACTTTTTCCTTTCATAGTTTACCTCCAATCACTTTCTACATTATAATAAATATAGATGTAATGGTCCAAACCTATTTAGGGGCTTAAGAGGTAACATTTGTGATTACTGCAAAAGGTGCTGATG # Right flank : GGAAATGATTTTCTTTGAACCCCATAACTATAAAAGTCACTGATGTTTATTTCACTAGTAGTTTCAAATCATAAACTTACTTAATGCTAAAAATTTGAAAGTAAAGGAAGTGTAATTTTTGTGTTAACGTTGATTGTATGTGAGTAGTAGATGTATTGTCATTAAAACTCATATTTACAATTCAAAATTATATTGATGGAAAGTATATTTATATACCAAAGAATGTAATGGAAAAATCCAGGGGAGAATTAAAATGAAATTAAATATCAGAAGGTTGACAATAATACCTTTGAATCTAGAACAATTCAAGGTATTGTTTGATGTAATATATATGACAGAAGTCGTAAAAAGTATGTGTCAATGGGCATTGAGTGATAAGAAGGTTTTAAGAGTTATTGCCGGAACAGATAAAAACAATATTGCTTCTCAAAGAGTTTTGAAGAAATGTAGTTTTATAATATATGATGAAGACCATGAAAATTATTTATGGCAGTTAAATA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACAAGGATTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGGATTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 2757119-2756697 **** Predicted by CRISPRDetect 2.4 *** >NC_011837.1 Clostridium kluyveri NBRC 12016, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2757118 30 100.0 37 .............................. ACCTAATATTGATATGGCACCTCTTACAGCAACTACT 2757051 30 100.0 34 .............................. TCTAAATTATGTATTTCTTCTATTAAATCCTTGG 2756987 30 100.0 36 .............................. CATAAGAGACAACGTTATATTTGTAGTTAATTCAGA 2756921 30 100.0 35 .............................. CAGGCTCTTGAGATGTTTGAAAAGAACTTTGCGAG 2756856 30 100.0 36 .............................. GGACACAACCGCAGTTTTAGGAGAGTTTGCAGATGC 2756790 30 100.0 34 .............................. CCATAAACGGGGCAACCCTAGTAACTATGTACAA 2756726 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 100.0 36 GTTGAACTTTAACAAGGATTGTATTTAAAT # Left flank : TTAATTTAAAGAACATGATGTAGTAAGGAGGATTTTTGTGGGGAAAAATTTTAACTTCAATTATGCATTTGTATTTTATGATGTGAATGAGAAAAGGGTTAATAAAGTTTTTAAAATATGTAAAAAATATTTCCATCACCATCAAAATTCTGTTTTTAGAGGGGCCATAACTCCTTCAAAACTTATAAAATTGAAAAGTGAATTAAACAAGATTGTGCAGGATAAAGACTTCGTTACAATTATAAAGCTTATAAATGACAGTTGTTTTGATGAGGAAACTTTGGGTATAAATGAAAAGAATACGGAAAATTTAATACTTTAATTTTTCCAACCTCATAATAAGGTAAAAGTGGTGTAATGTTATCAAATCACTAGCATTACACCACTCTTTATATACATTTTATAAAATATGAAAAATGGTTGGAAAAATTTCAACGAAAGCCTTTATTTATACGGTTTTAAGTAATATAATAAAAATAAGAAATAGGCATTTTACATTA # Right flank : ACAGTAACGGATTAACCCCCTCGTTTTGGACAGAATCTAATAAATTCTTCATTTCTATTAAATTTAGACCCTTATTTGAATGTTTGTTAGGTTTTCTTCAAAATAAAGGTTATAAAATTCATGTGGAGCCATAAATCTTAAACTTGAATGTAATCTCCTATTATTGTAGAATTCCATAAATTCATTTACTATTTTGTATGCTTCTCCATAGCTTTGAAATTCATTAATTTTTAAACACTCATCCTCAAGTATTCTGTGAAATGATTCTACATGTGCGTTTTTATTTGGCGTCTTCACTGGTATTCTCTCATGTTCAATTTTAAGTTCTTCACAGCATTCATCAAATTTATGACTTATAAACTGGGGTCCGTTGTCTGTTCTTATTACTGGCTTTTTAGAGTCTTCCTCAAACAAGTTTCTTCTTATTAAGCACTTCCTCAGTAGTGCTGCAGCATCTTTAGCCTCACAGTGTAAACCCATGTGGTAATCTATAATGCTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACAAGGATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2768195-2766590 **** Predicted by CRISPRDetect 2.4 *** >NC_011837.1 Clostridium kluyveri NBRC 12016, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2768194 30 100.0 35 .............................. TGAACGTATTCAATTTTTATAATTTTTACTATTTA 2768129 30 100.0 36 .............................. TAGAGGGTGACCTCTGCGAGAAGGAAGTTTTTGTAC 2768063 30 100.0 36 .............................. GCATAGACCCCATAGTAACTATTATAGGTGAGGAAG 2767997 30 100.0 36 .............................. GGTATAATTATGTCTGCTGTTTTCCACTCTGGAAAT 2767931 30 100.0 37 .............................. CTAAAGATGAATTGACACTAAAACAATGGATTAAATC 2767864 30 100.0 37 .............................. CAGAAGGTAAAATAGCATTTAATACAGGCGGTACTGG 2767797 30 100.0 37 .............................. CCTCTTTTCTAAGTACGGATTTTCCTTGACTATAAGC 2767730 30 100.0 34 .............................. AAAAGAAAAAGGAGGCATTAATAACCCAACTAGG 2767666 30 100.0 37 .............................. TTACTTTCTGGTGTGTTAGTATTTTCTTTTGCTTCAG 2767599 30 100.0 34 .............................. GTAGAGGAATTAAACACAAAGATAAAAAACATAG 2767535 30 100.0 36 .............................. AAAGTATTGATTCTTCTGCCTTTGCTAAATTCCATA 2767469 30 100.0 35 .............................. GGGGAAAGAAGATATGAAGCACTAAAAATGTTATA 2767404 30 100.0 37 .............................. CAAGTTATGCTGAACACTATCCAACTGAAATGACTAA 2767337 30 96.7 36 ......C....................... TTGTTAGAATATCCTGTGATAATTTGAAATACAGTA 2767271 30 96.7 36 ......C....................... AGGCCTATAACGAAAGTAAAATAGAAGAACACAGGA 2767205 30 96.7 36 ......C....................... GACAAAATAGCAGTAACAGACATTGAAAAGATCGAG 2767139 30 96.7 36 ......C....................... ACTCCAGAAAGGAGATATTTAATATTGATCCTAAAT 2767073 30 96.7 35 ......C....................... GATGGGTTTACAACCAAAAGCACATTTTGTACAGG 2767008 30 96.7 36 ......C....................... CAATGGCTGGCTGCTGCACTTGCAATTACAGGTCAG 2766942 30 96.7 37 ......C....................... AAGCTGATACCTGAAATACAAAACTATATTGACTTAG 2766875 30 96.7 36 ......C....................... TTAGGATTGCTCCATAACTCAAGGCATCTCTTAATA 2766809 30 96.7 36 ......C....................... AATGGTAATAGATGCAGCTCCAGAAGCTTTGGATAC 2766743 30 96.7 36 ......C....................... TGCCATAGAAAAAACTGATGATATGATTCAATATGA 2766677 30 96.7 27 ......C....................... ATTTTAATGGTAAATGTTTAAATTTAT Deletion [2766621] 2766620 30 80.0 0 ......C.........TG.....AA..T.. | A [2766595] ========== ====== ====== ====== ============================== ===================================== ================== 25 30 97.7 36 GTTGAATCTTAACAAGAATTGTATTTAAAT # Left flank : CTCTTGTGCATAGAAATTACAGTATTTTAGGTTCTAAAATAAGAATTTTTATGTTTGATAATCGTATTGAATTTCATAGTCCGGGGAAATTACCTAATACTGTTACTATTGAAAAGATGAAAATTGGAGTGTCTTATGCAAGAAATCCTTTCCTGGTAAAATATATGGAAAATATGAGATATATAGATCAATTGGGAAGAGGCGTTCCTATGATTCTGAAAACAATGAAAGATTTAGGGGCAAGGGAGCCACTTTTACAGGAATCAGGAGAAGAATTTGTTCTTACTGTGTATAAAAAATAAATTATATGAAAAAGTCATTATATTTTCCAACCTCAATTCCAACTAAAAGTGCTGCGTCCGTTGAAATCCAATGGATTACAGCATTTCTTCTATGTGATATTCAAAAAATCAAAAATGGTTGGAAAGATTTTAATAAAAGGCTTTATCTATGGTGGTTTAAAGGATATAATAAAAATAAGAAATGGCTATTTTACGTTA # Right flank : GAGCAGAATATTATATGTTCGAGAGTTTTAAAGCTAATATTACAATCAATTTTAATGGTTAAGGTTTAAAACATAATTTAATATATCTTCGCATAGTATTTAATATACTTAGAAAAAATAAAAGGGGGGGAATACATGGATAAATATATCATTTTTGATATTTTCATAATATATTTAATATTTTTCACGAAAGATTTTAAAATTACTATAAGTATAACATCAAAAAGATAAATTTTGGTCAGTGGTTCAGTTAAAGCGTATATACTCTGCATCTAAAAATAATATATAGGTGTAGAGCTTTTAGTTCAATCTAAAAAATTTCCTTATAATTCATCATGTTTCTGTAAAATATTCTAACAATTTTTAAAATAGTGCAGGATTTGTTAAATTGAAGTAGAATTTATAAGTATATAACTATTATGTAAAAGGAGAATACATATGGAAGTATACGAAATTAATGTTAAAATATATACGCTTGAAGATATATTTAAGGAAGCATC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATCTTAACAAGAATTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGAATTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 3511359-3510143 **** Predicted by CRISPRDetect 2.4 *** >NC_011837.1 Clostridium kluyveri NBRC 12016, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3511358 30 100.0 36 .............................. AACTGTTGGTACAACTAATCTTATGAGCATTTTCAT 3511292 30 100.0 34 .............................. TTTAATTTCCTCCCTAAATTATATAATTTCCAAA 3511228 30 100.0 36 .............................. TCTTGTGGGGTATCGTCTTTCTTTTCTTGTAGGCTT 3511162 30 100.0 36 .............................. AACAGCAAAACTGTTTGGAGTCCCATGGAAAGCCAT 3511096 30 100.0 35 .............................. TGACCTATGGATACCTGATAATAAGTTTGATGCAC 3511031 30 100.0 35 .............................. GCTTTTTTTGCAAGTTCTCTTGTGCTTAACTTTAA 3510966 30 100.0 36 .............................. TATAAAAGAATGTGGAGTTGTAGAAACTGAATTACC 3510900 30 100.0 36 .............................. ATGGCAAAGAAAGACCATTACAGATGTTGTTGCATT 3510834 30 100.0 35 .............................. TAAATAAAACCTTGAGAATTAATAAAATCATCTAT 3510769 30 100.0 36 .............................. TACCTAAAGTTATTGGTAAAGTAAAAAAGCTTTTTA 3510703 30 96.7 38 ......C....................... TAGATGTAAAATTGATTAGCAGAAGTATCAGTATTCTT 3510635 30 96.7 35 ......C....................... TATACTTTATAATCTATAGTATTAAGCCAATTTCT 3510570 30 96.7 36 ......C....................... GTGATTTAGCAATGTCTTTAGGTATAAATAAGTCTA 3510504 30 96.7 38 ......C....................... TATATCTTTCCATGAGAATTGAACACATCAAGTCTCCA 3510436 30 96.7 37 ......C....................... CCCTGTAGAAGTTTGAAGGTTTTTTATGTCAACATCC 3510369 30 96.7 36 ......C....................... CCATAACCAGCATTAGATATTTCATCTTTGGTAGCA 3510303 30 96.7 35 ......C....................... ATTTCATTTTCCATACTGTACCTTCTTAGTTTTGC 3510238 30 93.3 36 ......C.....T................. TCTTCTACAAAAGTTTCATATTCGAATTTAACATCT 3510172 30 80.0 0 ......C.....T...GGC......A.... | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 97.4 36 GTTGAAACTTAACAAGATTTGTATTTAAAT # Left flank : GTGTTTTCACTATAACCATATATTACATATTACGAATGTTTTAATTCCAAATTAATTCCCTCAAAGCCCATTGAAATAATAGCAGTAATTTTTCTATTTACCGTTTGATTGATCTGGAATTGTTTTTAGTAAGTCGACATAATTGAATGAATTATATTCATTTAGAGCAGGAAATGTTACAGGGTTGTACCCATTAATAGCATAGTTATCTATTATTAAAATTGAGATGATATTAAGGAACCAATATAAGTATTCTTATAGACATTAACCATTATGTTCAATTTATCGCATTTTATATTTATTTTTAAAATCCCCGTTAGTATTTTTCCAACCTTAGACAAGTAAAAATCTTATATAAACTGTTGATATACAATGCTTCCAAGGCGATTTTATTCTTATAAATACAGAAAATAAAATTGCCTGGAAAAATTTTTATAAAATCCTTTATTTTCAATACTTAAAGAGATATAATGAAAATAAGAAATGGCTATTTTACATTA # Right flank : GTTATACAAATATTTGATTTTATTCCAATATATATAAGAAAGCTATAGTCACCCTCAAAATGGTTACTAACCTAAAAACCTTCCATATTAAAATTAACGAGGATTTAATCGTAAAAAAGAGAGCTTTACGTTTTCAAATTCTTTCCACATATCTAGAAACCAGTATAATTTTACTTTCCTAAATTGGCTAATAATTCCACATAAATTTCAAGCTATCTATAATTTTTCTTCATCTCTTGAAATGCTGTATCATATATCTGCTAAATAATTCTTTATCAAAAATATGAAATTGACTCATAGAGTTACTCTTTTTTCTAATATGATATTTTTTAAAATGTAAACAATCCCTAATTATAAATCACATAAAGTTCACATTGTTATTACATAATGTAACTACAATTAATACTTATAATTTTTTTAGAGATTAGGTTAAGTGAGATATAGAGATATTCAAATATAGAATAGTTTGTAGTGTATATAAGTATAATTAGAAATTTAAA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTAACAAGATTTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGATTTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //