Array 1 69361-71983 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANXV010000013.1 Sutterella wadsworthensis strain 855h contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================= ================== 69361 37 100.0 35 ..................................... AAACAAGGCGGTTAGGAACAAAGAAGAAGAAAGTC 69433 37 100.0 36 ..................................... TAAAAGGAACAATCGGCGTAGCCAAACGAGCAAATA 69506 37 100.0 35 ..................................... AAACAATTAAAGCAGGATCCTTCCAAGAAAGCGGA 69578 37 100.0 37 ..................................... CTTTTCATAGATCACGCTGGCGGTGGCAGCACTTACG 69652 37 100.0 36 ..................................... AGGCTTAGGAGGGATGACCATAGGACGATTCTTAAA 69725 37 100.0 35 ..................................... TTCAGTCTCTAGCGCAGAATTAGCAGTCTTAAGCT 69797 37 100.0 36 ..................................... TTTTACCTGCCTTGGTAAAATGGTTCTTTTTTTTAG 69870 37 100.0 35 ..................................... ACAAACGCCAAAATCTTTAAGAGTCAAACGAAAAG 69942 37 100.0 39 ..................................... TTAAAGCTTGAGCACTATGACGGCAAAGTTGCTGAGTTT 70018 37 100.0 36 ..................................... TGACCACCAGTAGCGGACAAAATGGGATTAAGACCT 70091 37 100.0 39 ..................................... TTTACGCCGAAGCGTCCGATCCAATTTGGCGATTTTTCA 70167 37 100.0 35 ..................................... TCTTATTTCGCTCAGTAGCTAAAGCAGAATTCTCA 70239 37 100.0 34 ..................................... CAAGGCAACCTCGCCGCTTTTGGTGTTGTCTCTG 70310 37 100.0 35 ..................................... TGGTTTCTCGAAGTCCTTCGTCGAGCATGGTTACG 70382 37 100.0 40 ..................................... TTTTCGTGTACGACGATGTGCAGGATTACGAACTTGACAC 70459 37 100.0 61 ..................................... ACTTGCGGCGGCTGCGCAGGCTCGCAGCTCAGGCCCCGGCCGACTATCGCGAGGACATTTG 70557 37 100.0 37 ..................................... TCGACAAGGCTTTTTCTTTAAATGCGAAAACCACCGC 70631 37 100.0 33 ..................................... TGATGCCCGCCGAGCGAAGTGCCTGCACAAGAA 70701 37 100.0 36 ..................................... CCGGCTTTACTACGCAGGTAGCGTCCGGCCTTGCGC 70774 37 100.0 35 ..................................... ATTTTGCACGTCTTGCAGATCAGAAGCTAAGACTT 70846 37 100.0 37 ..................................... CAAACCCATGCCACAGGCTTGGGTCGCTTCCGGCTTA 70920 37 100.0 36 ..................................... AATCGTCTTGTTTGGGACAACTGGCAGAAATTTAAT 70993 37 100.0 36 ..................................... ACGGTTATCCTCGATGAGCCAATCAATAAGCTCATT 71066 37 100.0 34 ..................................... GAAGTTTGGCAGCTGATTGACAAGGCTTGTACAG 71137 37 100.0 37 ..................................... TACCTTTGCTTTAAGGTCGACCTCAGACCACTTAGCA 71211 37 100.0 36 ..................................... TGCGCACCCATGTTGAAGGCAAGGCTCAGTAGCGCA 71284 37 100.0 38 ..................................... TGCACTTTCCGCCCCCAGCCGCGACCGGAAGCATCGCG 71359 37 100.0 35 ..................................... CCCTAAAGCGTAGCGAGCGCCGTAGGAAAACTTCT 71431 37 100.0 36 ..................................... CGAAAGGCCATCAAGGACCACGTCGACCCCGAAGAC 71504 37 100.0 37 ..................................... CAGTGGTTGCACTCGTCGCCGTTGTTGCAGTGGTTGC 71578 37 100.0 35 ..................................... ACAAGGAACGATCTTCGTTGCTCATGAGAATATTG 71650 37 100.0 37 ..................................... ACGGTTGAAGAAAGCGGCACGACGGAAGCACCGATTT 71724 37 100.0 39 ..................................... TGGGGGGATGAAGAACGCCCTGTCGCCTATATCTCTAAA 71800 37 97.3 37 ..................................T.. TTTGTTTTGCAAACGATCGGAAGAAAACCCCTGCTGG 71874 37 100.0 36 ..................................... GGAGTGCTCGGTGAATCACTTCGCAGGAATGTGTCT 71947 37 78.4 0 ..GA...............A..A..C.A.G......A | ========== ====== ====== ====== ===================================== ============================================================= ================== 36 37 99.3 37 GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Left flank : GGTTTTGTGCTTTATGGCCAGAAAGGTCATACCCTGAAGGTTATAGTAGACATCAAATTACGAGCTGAAGTTCTTACTGTGGCAAATCTAATAAGAGAAGCCTGTAAAAAGGCTATCGTGCCTCATACAGCAGCTACGGAATCGCAATGCGCGCAATGTGAGTATCAAAATTTCTGTGCAGATCGATTCTAAGAAGTGAATACTTACTTCTAAGTAAGTAAATGAAAACCTCATTCTTTGGCCTAATCAAAGAATGAGGTTTTATATCAAAATATCCGGATATCTACTACTAGATAGTGGCCGGATTCAATCTTAGCTTTAGGGGATTTCAGCTCACCCGAAGGTGATTTCCTATAGCTCATAGCATTATGATCTCTAATCAGTATCTTACGATGTATTTTCGAAAATTACAAGGTTTTTTTATCAATCTGAGTATTTTCGAAGTATGGCACTCTGCAGATAGTTGCAAAAACCTTATAAATCAATGTGTAAGTTAGGGG # Right flank : ACACAGATTCAACAAATATCACTATTCAAGGCATTGCAGCAATTTCACCTTAAAAGCATGCGAGCGCTCTAGTGTTATAGACACACTCCACTGAAGAAGCCGCGTAGCAACGTCTACGCCAAACCCCCTACAATAGATGCCTCATGTTGATTCTGGAGGCTCCGTCATGGGCAAGCTCTATATGGGTTTCGATGCTGGCACGCAAAGCGTGAAGGTTGCTGTTTACGATGAACAATTTCGCCTGGTCACGAGCCGATCACTGCCCACATCACTCACCTATCCGCAGCCGGGGTGGGTAGAAATGGACGTCAACACCTATCTTGACAACTGCGTGGTTTGTATGGCTGAAACCACGAGTGAACTGCGGCGTTTGGGGTTCGATCCTAAAGACGTCAGTGCCATTATGGGTGACGGCATCATCTGCGGCATTGTCGGGATCGATGAAAACGCGGATCCGGTAACGCCTTACATCAACTACCTCGACAGCCGCACCATGGCTG # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGAGATCATAACGCTACGAGCTATAGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 7205-8074 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANXV010000023.1 Sutterella wadsworthensis strain 855h contig_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 7205 36 100.0 36 .................................... TTGTTCAACACTGTTCCTGCGAATCTTGGGAGAGCC 7277 36 100.0 33 .................................... TGCTTGATGGCAGCAGATTCTTCAGGAGTTAAA 7346 36 100.0 33 .................................... ATATCGTGTTAGACAAGAACGTGAAAATCTTGC 7415 36 100.0 34 .................................... TTGGAGGTTTCGTAAAGGCATGTACTGCCCAAGC 7485 36 100.0 33 .................................... GAAGCGTTGTTCAGTACCGTCCCTACGAATCTT 7554 36 100.0 31 .................................... AAAGATCCATTCATCTGTATCTTCTATATAG 7621 36 100.0 34 .................................... GTATCAGCTAATTGAACAACGATGATCGGTGAAG 7691 36 100.0 33 .................................... ACTCCGGCAGCTCTCGGATGAGTTCGTAAAGAT 7760 36 100.0 32 .................................... AAATCGCAGTTGACTGAACAACCGGGGCAGCG 7828 36 100.0 35 .................................... ATCTCTGTCCGCGCATCCATGCTCAGTACCTTTAC 7899 36 97.2 33 ................A................... GCTGCAAACCAGCTAACCTGCTGGATGCGGTTG 7968 36 97.2 35 ..........A......................... AGCTCACGAACGCTGCCAACGCGACCAATAAGCGT 8039 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 13 36 99.6 34 GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Left flank : GTTGCGCATCTTTGTGCGCAGAGGAGATTTGATGCACTTCATCATTGCCTACGACGTCACCAACCCGTCACGTCTTCAACGTCTTCACAAGGCTCTCTGCGAGTATGCGTTGCCCATACAGAAAAGTGTCTTTCTGCTCATGGGGAGTGAAGCGCAGTTTGCAAAGTGTTGTCAAAAGGCCGAGCAGATCATCGACTCGTCAAAGGATGATCTTCGGTTCTACGCCCTCCCTGAACGAGGCATCAAAATTGCTCTGGGGCAGGCACCGCTTCCCGATGGCATCTATCTATCCGAGTTTCCGGAGCTCTCTCAGAGCTGCTGAAGCTGAGAACTCCCAAGCTGGATCTGGAGGGATTTCATCCGTAAAATTGGTCAGATCATTGACGGCGGCTTGCTGTAAATATTTGACATCGATCAAATGCATAAAAATTCACTTTTTTGCCCTGATTGGACATTGCCGCATTTAATTGATAAAAATGAAATATTTTCGGAAAAGTAGA # Right flank : CCTTTTTTCGCGGTCATCTTCGTCTACGATCTTTTGTCGAAAGACTGCCCTGATGTAGTCCATGACTATGTCCTGCCATCAGGGCAATAACGCTCTTGTTTTACGACCGAGTTGCTGCAGGAATTTCAGCTGGTGCTGACGCCGCCTTGCCGCCAATTTGATTGATATTGGCAGGCCTGATACTTGGAAAGCATGCTTATATGCCCATTCCTTGCATCCGTGCCTCGACGGTTTGATCTCTGCGGGCTAAGCTTGAAGGACTTGTGCTTTCTTTCCGTGGAGTCCGCGCATGCGTTGCTTCAAGCCTTTGAATTCTTCTCCTTCGCTTCTCGTCTGTGCCCTCGCCGGCGCCTTTGCCTGCGCGGCATCGGCCGCTCCGGCAGCCAATGACGTACAAAGCATTTGGCTTGCTCCAACAGGGACTTCACCCTTAAGCGCCAAAGCGCCGCTGCGCATTGAGATTTCCCCGGCGGAAAGTCAATGCCGTGCCGCCTACGGGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACTGCCCTGATTAGAAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //