Array 1 2847276-2848743 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEHD010000001.1 Enterobacter hormaechei strain ENCL48946 48946_Chromosome1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2847276 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 2847336 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 2847396 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 2847456 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 2847516 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 2847576 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 2847636 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 2847696 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 2847756 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 2847816 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 2847876 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 2847936 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 2847996 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 2848056 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 2848116 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 2848176 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 2848236 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 2848296 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 2848356 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 2848416 28 100.0 32 ............................ CATAACGACACCTTTTAAAATCGTTAATTAAC 2848476 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 2848536 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 2848596 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 2848656 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 2848716 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2858220-2859086 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEHD010000001.1 Enterobacter hormaechei strain ENCL48946 48946_Chromosome1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2858220 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 2858280 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 2858340 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 2858400 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 2858460 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 2858520 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 2858580 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 2858640 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 2858700 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 2858760 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 2858820 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 2858880 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 2858940 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 2859000 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 2859060 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ACCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //