Array 1 2552137-2548675 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049811.1 Monaibacterium sp. ALG8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2552136 32 100.0 33 ................................ ATAGGCGTTGCGGATGTTGTCGTCATACCGCTC 2552071 32 100.0 34 ................................ GCCACCAAGTCTAGGGCCACCTGCAAGCGCGCGA 2552005 32 100.0 34 ................................ GCGGTCGTCAGGTCGGGAGCATGTGAGCGGGCCG 2551939 32 100.0 33 ................................ TCCCGCTCAGCTTGGGCTTGCCGTTCCGCCTCG 2551874 32 100.0 34 ................................ AACGCGCTCAAGCGTTGAGATCAGAAAAAGGTCG 2551808 32 100.0 36 ................................ CCCTATCCACATGCCCCGCTGGGCATCCCGCCTGAC 2551740 32 100.0 34 ................................ AGGCCCATATCGCCGATCTGAACGCGAGAGCCAG 2551674 32 100.0 33 ................................ ATACGCGACCAGGCTATTCGCCACCTCCGGCAG 2551609 32 100.0 33 ................................ CATACTGGCGATCTTGGAAGCCCGGTGATTTGC 2551544 32 100.0 33 ................................ AGCGCTGGTGCCGGGGTCTGACCCGGCGCGGCT 2551479 32 100.0 34 ................................ TATGCCGATGTGCGTCGATTGCGGTGCACGCCAA 2551413 32 100.0 34 ................................ TTTGTTACGTACGCTCAGCAGGGTGGTGCCGTGC 2551347 32 100.0 34 ................................ TGGTAAGCGGCGTGCCATCGGCCATGCGGTCGAT 2551281 32 100.0 34 ................................ ACCCCCGCACCTCTCGCACCGCGCAGCACGCCAC 2551215 32 100.0 34 ................................ CCCGCCCCCTACCGCGACACTTACCGGATCGGCC 2551149 32 100.0 33 ................................ AGGGTCTGAACGATCCGGGTGAGTGCACCTTTG 2551084 32 100.0 32 ................................ TACAGCGCCCCGCTGACAGGTGACGACGACAT 2551020 32 100.0 34 ................................ TTGGGCTGACCGCAGGCGCGGGCGAGGGGAGCGC 2550954 32 100.0 34 ................................ GTGGAGAGCTTGATCCAGCGTCGGCAGCTATCGA 2550888 32 100.0 34 ................................ CAGAACCACTCGGCAAGATCCTCTACAGCCTCTT 2550822 32 100.0 34 ................................ GGAGCGCAGGCCCAGCTCGCTGGTAACTACATGG 2550756 32 100.0 35 ................................ CCCAAGTTACCCCGCCACATCGACATGCAGGTCGC 2550689 32 100.0 32 ................................ CCACCGCAGGCGTAACGCGCCTCAAACGGAAA 2550625 32 100.0 35 ................................ TCGACAGCATGTGCCATTTTGAAGCCCCACCAACC 2550558 32 100.0 33 ................................ TTGCGGCATGGAGGGATCGAGCGGATGTCAGGT 2550493 32 100.0 34 ................................ CGATCCGTGGGCGCAAAAGGCGCTATACATGACA 2550427 32 100.0 34 ................................ AACGCCACGCTTGACCCTGCGCCCGATGCGCTTG 2550361 32 100.0 34 ................................ CTGGAGTTGCCGTCCCAGCGGCCCCCGTTGACGT 2550295 32 100.0 35 ................................ CGTCGCGGCGATCAGGGCGCAATCGGTGCCGCCGC 2550228 32 100.0 34 ................................ CAGCTCGCGCTCCACCCGCAACAGAACATCGACG 2550162 32 100.0 34 ................................ AGGTGGACAGCAGCCCCAAGCCTGACGCCAACGT 2550096 32 100.0 34 ................................ TATGGTGATGGTGAAGTGGCTATGGACCCTATCG 2550030 32 100.0 35 ................................ CATGATCGTAGTGGACTACCTGCAATTGGTCAGGT 2549963 32 100.0 34 ................................ CCCAAGGAGGCCGTGCATTGGCGGGTCCAAGGCA 2549897 32 100.0 33 ................................ ACGCCTTCAAGCAGTCTCTCCAGCATACCGGCG 2549832 32 100.0 36 ................................ TATGAAGACGTTCACGCCCATTTCCGACGGGCAAAG 2549764 32 100.0 33 ................................ GACACGCAGCGCCCGATCCTGCGCGCGCCTGCC 2549699 32 100.0 35 ................................ ATGGGCACGCCCGAGGCCTGAATTCCCCCCCGGAT 2549632 32 100.0 34 ................................ TGAGCGTGGAAAGGCATCACTCGGCACCCTCCGC 2549566 32 100.0 33 ................................ GAATAAAAAGCCCGCCAGTGACTGGGCGCACCG 2549501 32 100.0 36 ................................ AGCACGATTGAATCGGATTGCCGGTCACTGCCACGG 2549433 32 100.0 34 ................................ ATTCCTGCACGTGTTGCGGCGTACTCGTGTGAGC 2549367 32 100.0 34 ................................ TAGGTTAGGGGGCACTGTGTGACCCACCCCCCCG 2549301 32 100.0 34 ................................ CCCTGGCCGGCGCTGGCCTTCAGTCCACGCTTCT 2549235 32 100.0 35 ................................ AACGCCACGCTTGACCCTGCGCCCGATGCGCTTGC 2549168 32 100.0 34 ................................ ATCAGCACGGCGCCGACCGTGATCAGGGACAGCC 2549102 32 100.0 34 ................................ GGAGCCATATTGGAGAGACGGATGGTTCGGTCGC 2549036 32 100.0 34 ................................ TGACAAGCATCGCCTGCGCCACGCTATCGCCCAC 2548970 32 100.0 34 ................................ GAGATACACCATCCCTCATCAAACATCTGCTCGT 2548904 32 100.0 34 ................................ AGGAACTGCAGACCGAGATTAACGGGATGCTGGA 2548838 32 100.0 34 ................................ CAGCGGTTTGGAGTATTGCAGCCGGGTGCGGATG 2548772 32 96.9 34 ...........G.................... GACATGAACGCGGCTAGGGCGAATGCACCCGCTC 2548706 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 53 32 99.9 34 GTCGCTCCCCTCGCGGGAGCGTGGATCGAAAC # Left flank : GTGATCTTGATGCATATCCAGCTTGGATATGGAGCTAATCTGATGATGGTCCTTGTCACGTATGACGTCAGAACGGATAGTAAGGAAGGTCGTCGGCGCTTGCGACGTGTTGCGCGCGCGTGTGAGGATTGGGGGCAAAGAGTTCAGTTCTCCATTTTTGAATGTGATCTCGATCCAGCACAATGGTCGGCCTTACGGGCCAGACTGATCGATACGATCGACCCTGAAACGGACTCGCTGCGGTTTTACATGCTGGGCCGGGAATGGCGTCGGCGAGTAGAGCATATCGGGGCCAAGCCATCCACTGACATGGATGGTCTGTTGATCGTCTAGTTTGCGAACCCCAAGCACTCGCTCGACCTCCGTCAGGTTCGCAGCCCTTTGTAACAAAGCTATTTCACTCAGCATCGCAGCAGGGTATTCAAGGAGCGCATCCGAACCATAGGGTTCGCAAATCTGACGCTTTTCTTCCTGCTCTTTGAAATAGTTAGAACAAGACA # Right flank : TATGTAGGTATCGACCGATGAAAGGGCGCGATCGTCGCTCCCTGTCCGTCGTCATATAAAATGGGACATCAGAGCGGCTTGAGCATTGGAGGCTCTGGCTCGTTTGTATGATTGATTATGCTGCTTGTTTTTGATGTTGCAAGCGGCGTTGTCGGATTGTCTGTTTCTTGATCTTTGCCCTTTCCCTTAGAATGGCTTTGTCTCGCCCGAAGTAGACGTCGGCCGGTGTGACGTTGTTTAGGCTCTCGTGGTAGCGTTGGTTGTTGTAGTAATCGACGAAGGCCCCTATTTGGCGTTCGAGATCACCGGGTAGGTAGTAGTTCTCGAGCAGAACCCTGTTCTTCATGGTCTGGTGCCAGCGTTCGATCTTGCCTTGGGTCTGCGGGTGGAATGGCGCGCCGCGGACATGCGTCATTTTCTGATCCTCCAACCACTTGGCCAGATCGGCTGAGATGTAGCATGAGCCGTTGTCGCTGAGCAGACGTGGCTTGTGCCGCACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 29115-29448 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049816.1 Monaibacterium sp. ALG8 plasmid unnamed5, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29115 29 100.0 32 ............................. CATTGTCGATGGATTTTGAACACCTCAAGGCA 29176 29 100.0 32 ............................. TTGCTTAGTGGCCCTAGCGGACAACGAGGGGG 29237 29 100.0 32 ............................. CTTATCACTTGGGTCCTGTCCGAAGCGCTCAT 29298 29 100.0 32 ............................. GCTATCGTGTGGTTCGTCGTCCTGCCCTCACT 29359 29 100.0 32 ............................. ACATCGGCAAGGCTGGCGCAGAATACACGCTG 29420 29 93.1 0 ..........................TT. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 GGCTCCCCCGCACCCGCGGGGATAGACCC # Left flank : GCCAGCGGGTCGGCTTCGATCTGCGCGTGCGCCCGGTGCGCAGGCTCAAGAAGGCTGTCGGCGGGCGGCGCCCGGGGGCGGAGATCGACGTCTTCGTGCATGAGGCGCTGAGCCGCTTTGACGCGGATGAGAACGGGATGCTGACGTCAGGGCGCAGCCGCGCCGCCGTCTATGGCGACTGGCTGGCCGAGCGGCTGGCCGGTGACGGGATCGCCCGGCTGGAGGGGCCGGCCGAGCTCGTCTCCTTCGCGCGGGAGCGGGCCGTGCGCAAGGGCCGCGCAGTGGAGGGCCCCGCCGCCGTTCTGCGCGGCACGCTGGTGATCGAGCGCCCCGCCGCCTTCGCCGACCTGTTGCATCGGGGTATCGGCCGTCACACCGCCTATGGCTATGGCATGGTGCTGCTGAGAGCGCCGCAGGAACAACCTATTGGGGAGTGAAGGGGAGGTAATACAACTTGAAATTTGCAAATATTCATGAGAGTCAATACCTTGCGCCCTAGA # Right flank : CAGGTTCTGGCCGGAAGCTATCCATTCGGGGTTATTCAGTGCCTTTGTTCGTTTGGGTCTTGGGTTGGCGGCGGGTTTGTGCGTGGATGGTCGTGTGAACTGGCAATGGTCATGAGGTGCCACAGGGGGAGGTCTTCCTCGGTTTGCGGTATTCCCAGACCCTGATCGGGGGAATTCGCTGTGCTGAAAGGACGGCTCGGGCTTGACAGTGCGAAGGTGCCCCATGCGGATCGTGAGGGGCTTCTCTACCTAGCACGCGGGGCGTTGAGCGCGCGCAGCGGCACATTGGCCTTTCTGCGGGGGGAGGCGTCGGGGGCGGATGCGCTCGACACGGGAGATTATGCCATTCCGTTGCAAGGGGTCTCGATGATCCTGCTCGGGCCCGGTTCGACGGTAAGCCATGACGCATTGCGGCTTCTGGCTCATGCGCGCACGGCGCTGGCTGCGGTGGGGGAGGACGGCGTACGCCTTTACACCGCGCCGCCCTTGATCCCCGACCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 30864-31195 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049816.1 Monaibacterium sp. ALG8 plasmid unnamed5, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30864 28 100.0 33 ............................ CGCTCGAAGAAGTCGTGCAGGTAAGCGGCGGGG 30925 28 100.0 33 ............................ CCCCAAGCATTTGAGCCTGCTGGACCTCTTCCC 30986 28 100.0 33 ............................ GCATGACGGGGGTGCTGGCGACTTTGGAATATT 31047 27 96.4 33 ....-....................... TTATATTGACGGCACCTATTGGTTTCGGTTCAA 31107 28 100.0 33 ............................ CGCGATCCTATCTGCGGAGCGGGCAGCGGTGGA 31168 28 82.1 0 .....................CC..TGG | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 33 GGCTCCCCCGCACACGCGGGGATAGACC # Left flank : CGGCCAAGCAAGCGGCGGAGCGCCCGTCCGAGAACATCGAGCGGTTGGCCCGGCGCATGACCGGTGATGTTCTGGCGCGGCGCAAGGTGATCCCGGAGATGATCGGCCAGATCAAGACCCTTATCGCGGGGGAGGGTGCCTGAGATGCCGCTGGCCATGATCGTGACGAGCAACGTGCAGGACCGTTATCGCGGTTTTCTGACATCCGTAATGCTCGAAATCGCGCCGGGCACCTATGTTTCCCCACGGATGAGCGCGGGTGTGCGCACGCGGGTCTGGTCGGTGATGGAAAGCTGGTGGGAAGTGCTTCAGACGGGATCGCTGGTGCTGGTCTGGGCAGACAGGCAAGCGCCCGGGGGCCTGCGGATCGAGACATTGGGCCTTCCCAAGAAGACAATCGTGGATGCGGACGGCGTATTGCTCGTAAAACGCGAGTGAATTTAGAAAATACAACCGAAGATTTGGGCTTTTCCTTTGCTAACAATCCGTTACCTTACAGG # Right flank : GTTGGATGGGAAGATCGGTCGTTTCAGCTGATGTGGGATGAATGAGAGATTGGGGGTGTCGCGGTTTGGGTCCGCGCTCACCCGGTTCACGCTGTTTTCGTCACGATCCTGCTTGTCCACGGGTAGGCAAGACCCGCCGCATTCGAGGAATGCCGTGCGCGAAGTAAAGCCAAACTGCCCCGCAAAGCGTCGATCTGCATCAAGGCTTCGGGAGCCATACGGACGGTGAATTTGGTTTGAGCTTTGGACATTCGGATACCTCATCGTGATGTACCCAAAGGCTATCGAGCCTGATCTTTGGCTGTCAGCACCGGATGCGTTCGATCAGCGGGTTTTATGTGGATAACCCTCGCGCAAGTTCAGCGGATACACGCATTTGCGACCCCGCCCAGTCGTTCCGGTTTCTCGGAAAACCGCTCCCGCTCAGGCCTGGCGAGTGAGATGACATATTGTTTTTCACAAGAGAAACGGCTGTCCAGACGGGGCGCAATTTTTCAAAT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //