Array 1 17692-13635 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHFP010000055.1 Paracoccus binzhouensis strain wg1 scaffold55.1-size28032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 17691 29 100.0 32 ............................. ATCCCGCCGATTGTCAAAGACGCCACCGTTGA 17630 29 100.0 32 ............................. GAGAGGATAAATAATGCAACGGTATGGCGCCC 17569 29 100.0 32 ............................. CCGTCATTGTCATAGCCCTCGTGATCGCGCAG 17508 29 100.0 32 ............................. CGGATGAGCTCGACCGGCTATTACGCCGTGTC 17447 29 100.0 32 ............................. ACCGATCACGCGTGCACGGCTTGGAACCAGAT 17386 29 100.0 32 ............................. GGTGATTGCATGATGGTCGAACTTGTCGGCCA 17325 29 100.0 32 ............................. CAGCGAAAACCTGCCCGCCCTGGGCGACAATA 17264 29 100.0 32 ............................. AGCATATCGACTTTGCCTATGGGCGCGCCGCA 17203 29 100.0 32 ............................. CGTAGACGATCAGGCGCACCGACCAATAGCGG 17142 29 100.0 32 ............................. TCAGCCATGCGGCCTCCTGACCCCCGCACAAC 17081 29 100.0 32 ............................. ATGGGGAACTGCCGCAGGTGTTCACCGGCTCG 17020 29 100.0 32 ............................. GTCTGGCGGACGAATCCGGCTCTGACGTGCCG 16959 29 100.0 32 ............................. CTCAACTCCATCTCCGTATAGATTAACCACCT 16898 29 100.0 32 ............................. TGTCATTGATGAACCACTTGCTCAACATTTCC 16837 29 100.0 32 ............................. TCGAAATTCAGTATTTCCGAAAGCATCAATAA 16776 29 100.0 32 ............................. GCCCCGGCGTGATGCTCGCCGCCAGCCGCTCC 16715 29 100.0 32 ............................. GGGATAAAAAGAGAACGGCCGCAGGGTGTTGG 16654 29 100.0 32 ............................. GGCGCGTTCGACTGCCGCGACTGTCTCGCTGG 16593 29 100.0 32 ............................. GGGGATGGCCATTTCGTCAGGCGTCTTGCGTT 16532 29 100.0 32 ............................. CGCGCGCAGGAATTGCGCTGTGGCCTTGCCAT 16471 29 100.0 32 ............................. GCGTCCACGTCGATGGGCGCGACCTCGGGGCC 16410 29 100.0 32 ............................. TGAACGCCGCTGGCATAGGTGCGGACGACGCA 16349 29 100.0 32 ............................. GCCCGACAGGCAGAACGCCGACACAACCACGA 16288 29 100.0 34 ............................. GCGCGCAGGCGGTAATCGGCGGGGCTACGGTACT 16225 29 89.7 32 G.TC......................... GCACCCGTGCCCGCCCAATAGCCGAATCGTGC 16164 29 100.0 32 ............................. TTGTTTCTCTTGTAGAACGCCCGCATCAGGAT 16103 29 100.0 32 ............................. CTAGGGCGGGCACTAGAGGGATGTATCGTTAG 16042 29 100.0 32 ............................. CCGTCACGGCGAAGTATGAACCACTTCACCTT 15981 29 100.0 32 ............................. CGGGGTGCAGCATGAGTGCGTCAGGCCACATC 15920 29 100.0 32 ............................. TTTGAGAGAGAGGGCGATATACGGCTGCTTGC 15859 29 100.0 32 ............................. ACCGTCGCAGGCATCGAGGCAGCGGAATGACC 15798 29 100.0 32 ............................. GCTGCGCATGCTGACGGCGCCCGCCAGAGAAC 15737 29 100.0 32 ............................. CTAGGATTAGCTTCTCTTGTGGAAGCCACAAT 15676 29 100.0 32 ............................. TTGAACCACGCCTTGTTTGCCATGTCGGCAAT 15615 29 100.0 32 ............................. GCGCATAAGGACGCCGCAATGCAGAGGGCTGC 15554 29 100.0 32 ............................. CAACACGTGCTATGAGCGCTATGCACGTAATG 15493 29 96.6 32 ................T............ CCAAGCGACGAAGCCGAGCCTTGGCACCCACC 15432 29 100.0 32 ............................. GCAAGGATGTTCATGTCCCCCGATCTGAATGA 15371 29 100.0 32 ............................. CCTGACAGCCTAACCGCAGGTTAATCACAGCA 15310 29 100.0 32 ............................. CGGTGTCAACCTCACGATCCTGCGCCGCCATG 15249 29 100.0 32 ............................. GACATGATCCCCCCGGAATGGCGGGGCTGGAT 15188 29 100.0 32 ............................. TTCTGCACCTCGTAGGAGCCCTCGATCTCGTT 15127 29 96.6 32 ............................C TGGGACATGATCGGCCATTCCGCCCGGCGGCT 15066 29 100.0 32 ............................. TGGCCGAGATGCGTGACGAGGCGACACTTGCC 15005 29 100.0 32 ............................. ACGGGTATGTATAGCTCGGATGTAACGGCAAC 14944 29 100.0 32 ............................. AATCCGTCGAATACATCGCCGGCGCCAACAGC 14883 29 100.0 32 ............................. CCAGACCGCGATCTGTGACGGCACCGAGGCGT 14822 29 100.0 32 ............................. CTGATGATCCTCGAGGCCGGGATGGAGTTCGA 14761 29 100.0 32 ............................. TGGCCCCTTGCCGAACAACGCGGCCTGCAGCG 14700 29 100.0 32 ............................. CATCCAGCCGGCCACGACCAGCCAGAACAGCA 14639 29 100.0 32 ............................. CAGTGGACGGGGCTCAATCTCCGCGAATGGGG 14578 29 100.0 32 ............................. GCGGCAGTCCTGGCGCGACATGGTCGTGCCAG 14517 29 100.0 32 ............................. GGTTCCTCTACGGGCTCGACCGGGGCAAGATC 14456 29 100.0 32 ............................. GCCCTGGTTGGCATCGAGGATCTGCTCGACCA 14395 29 100.0 32 ............................. CCGAACCCGTTGATGCCCCCGGGGATGATCCG 14334 29 100.0 32 ............................. GAGGCCGGGGTTGGCCTGGCCGTGGCGTTCGA 14273 29 96.6 32 ............................T GGTTCAGGGTTTGTTGTCTGGCGATCCGAACC 14212 29 100.0 32 ............................. GGCCGGCGGCGGGGCTTCCTCGAGATCCGAGT 14151 29 96.6 32 ............................T TGTGCCCGCTTAACGAGCTTGGCGATTTCATC 14090 29 100.0 32 ............................. CTGGGCGAGCGAGTGGGACGCCGGGGTCAGGG 14029 29 100.0 32 ............................. GCATGGCCAGCCGCGATCCCGTAAACGGGTGC 13968 29 100.0 32 ............................. CCTGCGCCTTAGCCTCTCGCTCTCCGTGACCT 13907 29 100.0 32 ............................. GCCCTCGCTCCAACATCGCCACCTTAGGAGCC 13846 29 100.0 32 ............................. TGGCCGTGGACGATCACCGGCACCTCGGCAAG 13785 29 100.0 32 ............................. GCCGAGGAAGCCGCCCGGCTTGCCGCCATCCG 13724 29 100.0 32 ............................. GTGTTGTAGTTAGACGCCCCGACCACGTCGCC 13663 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 67 29 99.6 32 CTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : TTCTGGCGAAGATCATCCCCGGGATCGAGGAGGTGCTGGCGGCGGGCGAACTGCCGCGGCCCGAGCCGCCGCCGGATGCGATCGGCCCGGCTTTTGGCGACGGAGCCGGTTCGGGGGACGAGGGGCATCGCGGATGATGGTCGTCGTCCTGAGCAATGCGCCGCCCCGCCTGCGCGGCCGCCTTGCCGCCTGGCTGCTGGAGGTGAGGGCAGGCGTGTATGTCGGCGACTATTCCGCCAAGACCCGGGCCCGGATCTGGGAGCAGGTCGAAGCCTATATCGAGGGCGGCGATGCGGTAATGATCTGGAAGGCGCCCACGGATCAGGGATTCGAGTTTCTGACCGTCGGTCGCAACCGACGGATGCCGGTCGATTTCGACGGGCTGAAGCTGGTTTCGTTCTATCCACGCGAATAGCCGGTGGCCGCGCCAGAGGGCGGCAACAATTGGTGCCTCGATTGACATCGTGAATATTATTGCAGCATAAAGGCTTCCAGGAAGT # Right flank : TCGCCACCAAAACCCGTGTTCAGTCCCGGCATCTGTTGGATCGGGTTTAGGATGAATCTGTCGGGCTCTGATGTCCAGATCTTGCAGATGCATTCGTATGGGGTGAGACCGCCGAGGGTCTTGAGCCTTCGTGCAAAGTTGCAGGCCGCCATGAAGTCGGCGAGGTGCGTTCGCAGTTGGTCGTGGCTGTCGTAATGGAAGCGTTTGACGGTGGCCTCCTTGATTGTGCGGTTCATCCGTTCGACTTGACCATTGGTCCACGGATGATTGGGTTTGGTCAGCCTGTGCTCGATGCCGTTTGCCTCGCAGATCATGTCGAAGCGCATCGGCCGGGAGTAGATGGTATTCCTGTTCCGAGGCTGCTCTGCGAACTGGATTCCGTTATCGGTGAGAATGGTGTGGACTTGGTAGGGCACGGCTTCGAGCATATGCTGCAGGAATTCCCAGGCTGTCTTCCTGTCGGCCTTGTCGACGAGTTGGGTCACGGCGAATTGGCTCGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //