Array 1 26599-21794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAKJTJ010000033.1 Bacillus sp. JJ-125 isolate CIP111883, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 26598 32 100.0 35 ................................ CAAAATAAAAGGATTTTCACCACAGCCCGAAAATT 26531 32 100.0 35 ................................ CTTAGACGATGTTACGATTGTCTCTGTCCCAACAT 26464 32 100.0 33 ................................ TATCTTTTCGAATGCATTAGACACACTTAAAAC 26399 32 100.0 34 ................................ ACTTGGTATAAATCATGTGCTGCAAGTAAACCTA 26333 32 100.0 33 ................................ TCTCACCTTATGACTTTAAGACAGGGTAATAGA 26268 32 100.0 34 ................................ ATATAGACATGCCTCTTGATGGTAAGGAATTTGT 26202 32 100.0 34 ................................ CTGATGGAGCATTAGTCCCACTAGTATGAAGCTG 26136 32 100.0 34 ................................ ACAGCATTCTCTCTAAGTAACTCAACTTTAAATA 26070 32 100.0 36 ................................ ATTTGAGATAAGTCGCCCAGGTATTAAGGAATACAC 26002 32 100.0 35 ................................ TAGTAGACGAACGTAACGCATGGTACTCTCTTACT 25935 32 100.0 37 ................................ AACATATAAAACTGGTAGTTTGTTGGGTTAACAGGTG 25866 32 100.0 33 ................................ ATTAGGAGGATAATATGGCAACGTTACAGTTTT 25801 32 100.0 35 ................................ CTCTCTGTCTAACCTCCATACGACCTGTTCCACCC 25734 32 100.0 33 ................................ AGATTACGATGACCACTAAGGAGGCGATTACGT 25669 32 100.0 33 ................................ ATAGGAAATGAGACCACTGATACCGGTATATTG 25604 32 100.0 34 ................................ ATCGAATACAGCGAAGATGATATCATGAAAACCT 25538 32 100.0 34 ................................ TCCGCTGCATTTGCTTTTAACTGAGCTCCACTTT 25472 32 100.0 35 ................................ AACAACTATAACCGTAGCAGCATATGCGTCTCCTA 25405 32 100.0 35 ................................ ATCAAATGAATGTTAGAAATGATTCTGATATAGAT 25338 32 100.0 33 ................................ TATTGAGTGGAGGTATTTAAAGGAGGTGGATAT 25273 32 100.0 34 ................................ AATGCTGGTGGTGGCAATGGCTTTGAATGTATAC 25207 32 100.0 34 ................................ AGGAGGAAATTTATGTGGTTGTAGAAGCGACTAC 25141 32 100.0 34 ................................ TGGTGCTTTAAGTCCTCTTAACTTATTCGTTACA 25075 32 100.0 34 ................................ AATTAAGAACCGGGGGGAGACATTTTTGGAAAGT 25009 32 100.0 34 ................................ AACCATAACATGACATTTGAGTTATACCGAGATG 24943 32 100.0 34 ................................ AATTAAGAACCGGGGGGAGACATTTTTGGAAAGT 24877 32 100.0 33 ................................ ACATGTATTAATAAATCACTTACACTTATTTCA 24812 32 100.0 35 ................................ TGATATCTGGTCAGCTATTAGCAACCCGAGACAAC 24745 32 100.0 33 ................................ AAAAGTTTTTAGATATCATAGAAGCTTCTAGAG 24680 32 100.0 33 ................................ AATGAAAGAGTCGAATTATTGACTCTTTTTTTG 24615 32 100.0 33 ................................ CAAATGACTATTTGCTATCAAATCGGACCCTAT 24550 32 100.0 34 ................................ AAAATGTCATTTTTATTTGACACGTTCTTTCAAC 24484 32 100.0 33 ................................ TGACAGGTGAATACGATATATGTACCGTGTTTG 24419 32 100.0 35 ................................ TATTCGAAAACTATCAAGGGATATTGATTATAGAT 24352 32 100.0 37 ................................ ATAAAATTCCTATGGTGGACAAACAAAAGCTCCTTGG 24283 32 100.0 33 ................................ TTACTTGCTCCATAGCGTGCCTTAAATCATCAT 24218 32 100.0 32 ................................ ATGGAAGGTAAATGGGGGATGATTATTGATGT 24154 32 100.0 34 ................................ CTCCTAAACCAAACTGCTGTATGAGACTCAGTCC 24088 32 100.0 34 ................................ TTGTTAATCGCATCAGAAATAGCCTCTGCTTCGT 24022 32 100.0 34 ................................ CATAGAAGAGAGTTTAAACAACGCCCAGCTAGTA 23956 32 100.0 34 ................................ ACTACTGGGGATAGTATTGAATTTATGTTTGACC 23890 32 100.0 35 ................................ ATTTCTAAAGACCCCAACCTTAGAAGAAAATAAAC 23823 32 100.0 36 ................................ TGGACAGATCATTTGGTACACATATGGGACAGAAAT 23755 32 100.0 34 ................................ TGATACCTTTACTCATAGTTCACCATTTTGGAGA 23689 32 100.0 35 ................................ AGTTTAGTGATGGGACTGTTCAACAAACAAGTCCT 23622 32 100.0 35 ................................ TAAATACAAGTCAGTTATTGAAAGTGACAATCAAC 23555 32 100.0 35 ................................ AGTTTGAAGAATTTCCTTTACTCGATACGACGCAA 23488 32 100.0 35 ................................ CAGTAACTTCCAGCGTGACGGCGGTCATGCTCTGG 23421 32 100.0 38 ................................ TTATAACCTAACCTCTCCATAGTGGAGAGGTAGTGGTT 23351 32 100.0 36 ................................ CAAACCTCCTATAAGCTAAATCCAAAAGCGATAAGT 23283 32 100.0 34 ................................ TGCTATAAGGGGACTTTTAGTTTTTTTAGAATGG 23217 32 100.0 34 ................................ AAAAAAACACAAGCAAGTCAAGCATTTTACAACT 23151 32 100.0 33 ................................ TGTATTATATTGAACTTGTTTTGCAATATAGTT 23086 32 100.0 34 ................................ AGTAAAATCTTGCATACAATTTAACGCCTTTTCT 23020 32 100.0 35 ................................ AATGCACGGTGGTGTTGAAATTGATAAGTTAGTCT 22953 32 100.0 36 ................................ TTGTTCTGGAATTAGAAATTGGCAAATTTTCAAAGC 22885 32 100.0 34 ................................ TCTAAGCTTTTTAATGCCTGGTCGTTCTAAGTAT 22819 32 100.0 34 ................................ CATTAGCCTTTACATCAAGAGTAGAGATCTGACT 22753 32 100.0 34 ................................ ACAAGTAAATATGTCAGAAGCGGACATTTTAGGT 22687 32 100.0 35 ................................ TAGTTGATTGGCTCGGTTTAATAAATCGTCACCTT 22620 32 100.0 34 ................................ GTTTTTGGCGTGGAGTGTACCCGACTCGCACATG 22554 32 100.0 36 ................................ TGATAAGGCGGTCATTAACTGCATAAGGGGCTGGGT 22486 32 100.0 33 ................................ CAAAAAACAATTTGCTACATAATTATCTGTTGT 22421 32 100.0 35 ................................ AATGGGTAGATGGGACAGGTTACTGGGATAATGCT 22354 32 100.0 34 ................................ TATTCTTGGGTTTGCACTTACAGTTGATTCTCCC 22288 32 100.0 34 ................................ TCCGTCAGGCTGCCATCTGATATAGATATTGACA 22222 32 100.0 34 ................................ CATAACTACCTCCAGCAAATACATTGTCAATGAC 22156 32 100.0 33 ................................ GATTTGCATATAGAAGTAAGCAAAGGTATATTA 22091 32 100.0 34 ................................ CTGAACGTGAAGGTACATTGGAAAGGTCGCCTGT 22025 32 100.0 35 ................................ ATGGATTCCTTACAATGGTTACTTATGGGGTATTC 21958 32 96.9 32 ...........A.................... AGTCGTCAGAGTTGTTGGTCCAAAACTTTGAT 21894 32 96.9 37 ....T........................... CGTGGATGAGACAGAAAAGGAAGAAGTGGTGGAGGGT 21825 32 96.9 0 ...........A.................... | ========== ====== ====== ====== ================================ ====================================== ================== 73 32 99.9 34 GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Left flank : GGAGATCTGGATCAATATCCCCCATTTCTATGGAAGTAGGTGAAACGCAAAGTGCTCATTCTTGTCACGTACGATGTTAACACAACCAGCGAAGGGGGCAAAAAACGATTAAGAAAAGTAGCAAAATCCTGTCAAAACTATGGCCAGCGTGTGCAAAACTCAGTGTTCGAATGCCAGGTAGACTCGACCCAGTTTGCTTCCTTGAAAATCGAACTGATTTCACTAATAGACCCATCAAAGGATAGCCTGCGTTTTTACCAGATGGGAAATAATTACAAAACAAAAGTTGAACACATCGGAGCAAAAGAATCCATTGATGTAGAAGAACCGCTTATCTTTTAGTGCGAACCCGAAGCTCGCATGAATTTCCCGGTAGATTCGCACCAAAATTTTGTGGTATTAAATATGAAATGTTCCATTTTACTCTCGAAAATGAAATAATGGTGTCTTTAAATGGAATAAAATGTAATTTTACAGGGTTAAAAGTCATTAATTTGGCT # Right flank : ACTACTGGTGTAATGGATCCTCTTTTGGCCATAATGTCACTAGCTTTGCAAAAAAAATTACAAAATATGGAAATGGATAACGAAGATTCTATTATTTTAAATAAATGTATATTTTTAACATGCTGTTTTCTATTCGATTTGAAAAAAGGGGACCTAGTCTTAGATAAAGACAAGTTTCCTATTTTTTACTATTTATTCGCTCGAAAATCCGAAAGAATGAACTTTACTGCTTTTAGTTTCTTTTTATGTTTTCTTGGTCGACCTGGCTTCCCTTTTTTCTTCCTAGGTGGTTTGTGCAAGCCTTCCACCAGGTAGTCCCATGGATGAAACCAATAGCATCTTACTTTTTTCAAGATATACGAGAGTGGTTTGTTTGTGGCCTTTAACTCCTCACGAACTAATTCGCATAGTGCATAGGCGATGATGGTGAGATAGATCTGGTTCCAAACTGCTTTCGGTTTATAGCTGTACCAATGAATGGTGGATAAATTTTGTTTTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //