Array 1 18749-19708 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBN01000015.1 Apilactobacillus kunkeei strain KA_01 scaffold_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18749 36 100.0 30 .................................... TGAAAATCGATTATGAGCCAGTGCGTACTG 18815 36 100.0 30 .................................... TCGTTCTCAATAAATTTATAGAAAATACTT 18881 36 100.0 30 .................................... AAGATTAGATATATTAGCACCCTAAAGAAT 18947 36 100.0 30 .................................... TAGTATTATTATAGACATAGGGACGATAAA 19013 36 100.0 30 .................................... TAGTATTATTATAGACATAGGGACGATAAA 19079 36 100.0 30 .................................... TTAATATTGAATCCAAMCGCTAAATTTAGC 19145 36 100.0 30 .................................... CAAACAACAATTGAATAAGCACCAAAAACC 19211 36 100.0 30 .................................... GATGGTTCACTTAACAAACCAGCTCCTAAC 19277 36 100.0 30 .................................... TTTTTGTTTGGTTGATAAGGGTAAATTATT 19343 36 100.0 30 .................................... ACGTCCATAAAATCTAAAAAGTCCATTACG 19409 36 100.0 30 .................................... CAAGCGTTAGCCGAAAAGAGCATGATAGAC 19475 36 100.0 30 .................................... ATTTTTGATAATGTATCTTGTAACTTTCCG 19541 36 100.0 30 .................................... ATTTTTGATAATGTATCTTGTAACTTTCCG 19607 36 100.0 30 .................................... GATTAATTAAAAAATCGATCGACGGACTAA 19673 36 94.4 0 ................................A..A | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.6 30 GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Left flank : ATGGTCTATCTACTAAACAAATTAGTTCTATTATAAAGAAGGTAGTTGGTTATTTTGATAATGACGATATCGACTATATGCAAAGAAATATTTCATCGTTGAATAATTTTATTCAAGAAAAATTGTTTTTTGGGGATATACCATTATTAATTACTCAAGATATTGATATAGAAAAAACTATAAAAAAGCTGAATATTCATTTAAATCCAGACATTGAAGGAAATCCTTATGATATAATAGAATTATTGATAAGGTTAAAGATGGAAACTCAAGATAATTCATTGATTGTTGTAAATAATTTAGCTAATTATTTGAACAGCGATCAGCTACAAAGCATTGAAAAATTATGTAAGGAGTTTGAAGTTCCATTATTAGATATTGAATTTGGTAAAAACAATGATATTAATAATACTGATTTTTCATTTTGTCAGTATTACTTTATAGATGATAACTTTGTTGACTGGCATTCTTAAAAATTAGATTTTGATTATAAAATATCG # Right flank : AGAGCTTGCTATATAAGCTCTTTTTTAGAAATAGATTTAAAATAAGATATATTCTATCTTATTAATTATGATTACGTTTCAGTTATCTATGATTGTAAAATGAAAATTTATAATAAAGATGTAGTGAATATTCAGATTATATGATTTTAACACTCACAATATAATCTTAATAAAAAATTAATAAACTTTACTTTTTCTTAATATTTTCGTATAATACAGAAGTAGGTAGTCATTCCAGATGATTTATCTTAATGTTTATTATTTACAACTCTCTATAAATCTAATTGTGCACCTCTCTATGTAATCACGCACAAATTAGGTTGGCCTGTCCGCTTGTTGGGCAGGCTTTTTATTTACTCTATTTTATTTATGAATAATGATATACTTAATTTATTATAGATTTGGAAGATGCTATTAGAATTAAAGGAATTATATTAGAAATAATCGAATCAATATTTTGGGGTATGTCCAGAACTGTTGCAGAATATCTTTTTGAACAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //