Array 1 188523-186880 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTV01000001.1 Paenibacillus peoriae strain FSL R7-0321 NODE_1_length_1385123_cov_1.36026_ID_3223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 188522 32 100.0 38 ................................ TTTAAACCACTGTTGTTTAGGTTCGTACTCATATCCAA 188452 32 100.0 32 ................................ CTTTTTCCCTCGATGATGAGACGAACTATAAA 188388 32 100.0 34 ................................ ACACAGCTTACGCAGATTACCAGCGCCGCAGTTA 188322 32 100.0 34 ................................ TAGGCAGACACAGCACAATGGGGATGATTTTTAA 188256 32 100.0 36 ................................ ACATTCGTATCATCCAAATCTTTCCACCTCCTCACA 188188 32 100.0 33 ................................ CTAACATCTCCACGCCGGAGCAAGATACTTTGA 188123 32 100.0 36 ................................ ATTTCCCGTTCCTGGGGAAGAGACATATAAATTCGC 188055 32 100.0 34 ................................ ATATCGCTCTTTACAACGCTGGTATAAAGTAGAG 187989 32 100.0 38 ................................ ATTAAATTATCCAATTCAGAAAATTTTCGAGAAACGAT 187919 32 100.0 36 ................................ ATGCGCTGTGTATCGCTATCAGGATGCCAAGGACCC 187851 32 100.0 36 ................................ ACTTATGCCCGGCTTCGGTCGGGCTTTATGACGCAA 187783 32 100.0 35 ................................ ATTGAGGCGTCCAACCACGTCAAGTTTACTTCCAA 187716 32 100.0 35 ................................ CTCAAAAGTCTGTTCAGCTCGGACGATGATGACGA 187649 32 100.0 37 ................................ CCAAAATGCCGCAAGAAATGGATTATATCCCTACAAA 187580 32 100.0 35 ................................ CACTCTTCGTACATATTTTTACGATCTTTGCAGGG 187513 32 100.0 34 ................................ ATATCTGAGGTACTTGAACGCTTATTTGAAGGAA 187447 32 100.0 34 ................................ ATCTGACTGAATGACAGTATCTTATCCATCAAAC 187381 32 100.0 36 ................................ AAGCAGAACGAGACGCAGCGTGCTCTTTCGGTTCTT 187313 32 100.0 34 ................................ AATAATGGATAGTAGTTCGTTGGCTAGGTAAAAA 187247 32 100.0 37 ................................ CAAAATGTTGTAGATGCTGGCCTAAGTGATGCTGAAA 187178 32 100.0 34 ................................ AGAGGGGCATTAAAGGGTTGCAGTTGGGAACCGC 187112 32 100.0 36 ................................ ACCACGTTAAAAAAGTCTTGGTTAATTGCATTCAGC 187044 32 100.0 34 ................................ TGGAGCATTTGCAGATAGTATTGCTGCATGTTAA 186978 32 100.0 35 ................................ ACTTTCGATGGATCACGGGCAACTAATTTGTACTT 186911 32 87.5 0 ..........................G.T.TG | ========== ====== ====== ====== ================================ ====================================== ================== 25 32 99.5 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : CCCTCCATTTTTGTGGAAGTAGGTTGATCTTGTTAATACTAATTACGTATGATGTAAGTACATTAGATAGAGAAGGCAGAAAAAGACTGGAAAAGGTTGTGAAAAGGTGCGTAGATCACGGACAAAGGGTGTAAAATTCCGTGTTTGAGTGCATTTTGGATTCGACCCAGTTCCGCCGTTTAAAATATGAATTAGAAGAATTGATAGACAAAAAAGAAGACAGCCTGCGTTTCTACAACTTTGGAGATAGCTATAAAAAGAAAGTAGAGCATATAGGGGCTAAGGAAGCTTACGATATGGAAAGCCCACTGATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGTATTAAAATTGCTATTTATCCGTAAAGTCAATAGTTGATCCAAGCTTATTTGACATCAGTTTTTGCGACAATGTGTAGAATTGATATCATTAGGGTATCAATTACTGCATTTTCGCT # Right flank : AAAAAGAAGGCTTGTTTCGTGGCCTGCCCAGCAGTGAATAGGTGCAAATTTCTTCTTAACGGATTCCTGATTCGGAAAATTCCCCTTACTTTTATGCGACAATTAACTAACATTTACAATGGTTGAAGTATAAATTTAGGTGGGAGTTGCTTATGAGAATTTCCATGAGTAAGTTACTAAAACGCTATGCAGCGATTTTGTTGGGCTACGCAATAGGTATAGGGTTATTTTACGCTTTGGGATATAAGATGAGCGCTATGGGAATCTATGCAATTTTGACAGGAATTGTGACTGGAGAAATAATCAACTTCGCATTATCAAAGCGAGAGAAATGAACCTAGGTATCCCCTGATTGCATCAACATCAGGGGATTTTTCATGTAATTAAAAGGTCCAACAGAGTTTCTGCATGGGACCTCTATATCATTACTGGTGAGAATCCACATGGGGAAATGAATTAGTCATGTCAACTCTGTGAAACCTTTTACTTGGATCAACCCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 190740-189634 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTV01000001.1 Paenibacillus peoriae strain FSL R7-0321 NODE_1_length_1385123_cov_1.36026_ID_3223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 190739 32 100.0 35 ................................ ATTCTCTTCGCCCGTCTCAAGCAGCTCCGCGATCA 190672 32 100.0 38 ................................ TCATAACCGTTAAAAATAGAAACACTACTAAGGTCTAC 190602 32 100.0 38 ................................ CCCTTCAAAATCGACTTACCACCAAAACCAGAATCAGC 190532 32 100.0 33 ................................ ATTGATGATTTGAAACTAACGTCGATTAAAGAC 190467 32 100.0 35 ................................ GTACCATCTTCGGAGGCTGTCGAGTCGGAATGATC 190400 32 100.0 36 ................................ ATAGCGGGTGACGATGGGGACGCTTTGCAGATTTTC 190332 32 100.0 35 ................................ CAGTCAGAGGTGTAGAGATACCGTCTATTGTTGCC 190265 32 100.0 38 ................................ ATACACTGGTGTCCTCCTTCTCTGGCGTGTCCTTCTTA 190195 32 100.0 34 ................................ CACCTTGTCACGCTTACCGCTACGGGATCAAACA 190129 32 100.0 33 ................................ ACCCATAGTCAAACTGTGAAAAACTTGAATGGA 190064 32 100.0 35 ................................ TGATTAGCCGCATTTGCTGGATTAGCATTAGCCTT 189997 32 100.0 34 ................................ TAAGGCGTCTTTAAGCGCCTGACATCCAGCCGGA 189931 32 100.0 34 ................................ ATATTGCGTTTTACAGTAGAAATTATTTTGCATG 189865 32 100.0 35 ................................ TCGCCATATGAAATCATGCGGAGGTGCTGATATAA 189798 32 100.0 34 ................................ TTGTTCGTTCCCGGCGTGATTTGATATCGTCCTT 189732 32 96.9 33 ...................T............ GTTTCTCTGCCATCTCTGCTTTTAAGAGTTTTG 189667 32 90.6 0 .............................CGG | AC [189637] ========== ====== ====== ====== ================================ ====================================== ================== 17 32 99.3 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AATGCAGCCTGTATGATGAACAGGGTTAATAACTCAACTTTTGCCGAACGTTTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAATATAAAGGTATTTTTCTGATCAATGTAGTCGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGAGCCCTGCTTTTAAATGCGCTATCGATGAATTAAATATATTCGAATGTGCGCTTACTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCTAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTACATCGAATGTGAACAAGTTTTAAACGATCGCAAGAGGATAAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTAGAATGTTACTTAAATAGGGGGCATTTGACCCATTTTCGCT # Right flank : AGCAGCCGCCACTTGGTCGTACGAGTGGAGAGCGCCTCTTTATCCGAAATCATGAAGGGGTCCGTGAAGTGAGGAGCTGGAGATTTTACGTGGTTTGGAGGGAGACGGCGTTGGTTCAGTACAATTCCGTGTGGGATGATCTGATCTTACAGCAAAAAGATGATTTTTATTTCCATGGACGCCATAAGCGCCCGTCGTTAGATAACGTGAATGCCCTATTATCTTTTGCCTATACACTGTTGTCCAACGATATGAAATCCGCACTGGAAGCTGTCGGTCTGGATGCTTATGTAGGTTTTCTGCATAGAGATCGTCCAGGGCGAGCCTAATTGGCACTGGATGTGATGAAAGAGCTTAGAGGAGTAAATACCGACCGTTTTGTTCTTACATTATTAACAAAAAATGATTCATGGCAAAGGATTTTACAAAAAAGAAAACGAGGCTGTCATGATGGACGATGATACGAGGAAAATCGTATTGAAGGCATGGCAAGAACGGAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 195930-195298 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTV01000001.1 Paenibacillus peoriae strain FSL R7-0321 NODE_1_length_1385123_cov_1.36026_ID_3223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 195929 32 100.0 35 ................................ TCAATTCGTTCCTTGCTGGTGATAACTCCCTCTAC 195862 32 100.0 35 ................................ CAACAGTCCAGCGGTTTGGGATTTTTTCACTCCAG 195795 32 100.0 35 ................................ TCTCAAGTTCAGCAGCAGCTTGGACAAATAGCTCG 195728 32 100.0 34 ................................ TCATTAACCACGGTCGATTGATCGTAACACCTAA 195662 32 100.0 36 ................................ TCATTTGCTGATTAGGGTACCCGTTAATGATTTCAG 195594 32 100.0 34 ................................ GATTCTGAACGCGGTAATACTACGTAAATCACCA 195528 32 100.0 35 ................................ CGACGCCGAACGGGAGTAGGTTATGTTACCGTCCG 195461 32 100.0 34 ................................ TCCCTCCCCGTCTGTGTAGGTAGCAAGGATGAAC 195395 32 100.0 34 ................................ ATTTGCGAAAATGACAGTATCTTAGCTATCAGAC 195329 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 100.0 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TGTCCTGTTTTTGATTAACAAGAAAATGATTAGATAAAGGATTTTACAAAAAAAGAAAATGGGCTGTCATGATGAAACGATGATATAAGGAAAATCGTAATGAAGGCATGGTACAATGAAACAGGATAGGATTATGTATCTCTATTTGAATGTATTTTGGATTTGCCCAATTTAGACGTTTAAAGTATGAACTAGAAGAATTAATAGACGAAAGAGAACTTAGCCTGCATTTCTACAATTTGGGTGATAGTTATAAAAAGAAGAAGAGCATATAGGGGCTAAGGAAGCTTCCAATATGGAAAGCTCACTGATTTTATAAGGTGCGAATGTGAAGCTCACATGAAAACCCCGGGTCCTTCGCACCTCGGAATTTGTCGAAAAGTATAGAAAATGCTATCAGTGAGAAAAAGTCAATGGTTAATTTAAGCCTTTTAGACATTGCTTTTTTCGAAAATGCATGGAAATGATATCATTAGATAATCAATTACTGCATTTTCGCT # Right flank : ATGATGAATGGAGGACGTCCTCAAGAAAGAAATAGGCGCACTCCATGTGACAATTGACGATGCGGCAGGATTCACGGTCAGTCGTTACGGCATATGGTTTTGTTTGACTGGTATGCTTTGCATAGTTCTCAGGGCTTCAGCCGCAGAAGGAAGAAAATAAAATCGAAGTGAAACGATCTTTGTGATATGTACAATGCTCGCAATGGGCGCGATGAGAGGCAATGATGCGGGGGAATGAGGCAAGAATATGAGTGCGTACAGGGGATAAAATGAGGAAGAACCACCGAAGGATGAAAAATCCAGTGCGGTGGTTCTTTTTTTTCACTCGTCTTGTATGCCATCATTATAGGGGGAGGGGATGAAGGATGTTCCAGGATTTCAAGCTCGTAAGTGACCGGCCGGTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTACCTTCCACACGAGAAATGAGCGTTCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 201527-200743 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTV01000001.1 Paenibacillus peoriae strain FSL R7-0321 NODE_1_length_1385123_cov_1.36026_ID_3223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 201526 33 100.0 34 ................................. ATCTCAAGCGTGATGCGCTCGATGATGTTGTACG 201459 33 100.0 33 ................................. CACTGGGTCGTTGGAAGAGATTCAAGAGCCTAC 201393 33 100.0 34 ................................. CGAAAACGGCGCGGCGTAATCAGACATAAACGCC 201326 33 100.0 37 ................................. ACAACAGTCTACCATAATTTAAAAATCTTACCGCCAG 201256 33 100.0 34 ................................. AATCGTACCTGCGACCTCATGCGGTTGCAGCGTG 201189 33 100.0 37 ................................. CGCAACTGGTTTTCGATAGTTGAAAGCTTTAAGAAGG 201119 33 100.0 35 ................................. CTTTAGGTGCAGTTCGTTCCTGCCGAAAAATTGAG 201051 33 100.0 37 ................................. CCAAACCTCCTTATTACGCTGACCGTGTACCTTTGCC 200981 33 100.0 36 ................................. AATTGATCTACGCTCTATGCGTTTTTTGCGCTCAGC 200912 33 100.0 35 ................................. AGGACGGTGACTCCATCCCTAAGCGCCATCCCTGA 200844 33 100.0 36 ................................. AATATCGGTACTGGGGATATCGTCACTTTAATTGAC 200775 33 97.0 0 ......................C.......... | ========== ====== ====== ====== ================================= ===================================== ================== 12 33 99.8 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAACATATAGGGGCAAAGGAAGCTTATGATATGGAAAGCCCACTGATTTTGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCGCGAAATTTGTCGAAAAGCAATTAAATCAGTTACCTTCAGTAAAAGTCAATGGTTGACTCAAGCCTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATTAGGGTATGAATTCCTGCATTTTCGCT # Right flank : TTGCTAGGACTTGAAGAATTAACAGTAGAAGCTAAAGTCGCACTCTATATGGGTGCGTGTTGGAGACGTAGTATATTTCATAAGGAGGTTTTGTATTGGCTCCGGCGCATTATCGCTACTTTTTGGAGTAAGGAAGAAGACAATGACGCTTTTGAGGCAGGTGTTCAATCTCTTCTAATGAAAATCTCAGAACAATACAAACTAACGTATGGCGAAAAAACACAGCTGCTTGCTTCAATGATACTAGAGTATTCGAAATACGTAATAAGATGGGAACGTCACAGTACAATGGATGAAGAAGGAATGTGGGAGTAATTGAGACAAATGCGGCACTGGAGTTGAACGAACTGGACTTGATAGAGGAGAGGAGGAGAGAATGAAAACTTCTGTATGGCTACATAATTATACTCAATTCACAGCCCTAGGACCTATTAGCACCGAAAACAGTACCATTTTGCGTGGCTCTAAGGGGGGAAGAGCAGCCACCTTAGAGCCAGTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 5 211981-210202 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTV01000001.1 Paenibacillus peoriae strain FSL R7-0321 NODE_1_length_1385123_cov_1.36026_ID_3223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 211980 32 100.0 34 ................................ CAACACTATCCCGCGTACTCCATGCCAACAATTG 211914 32 100.0 35 ................................ ATGAGCGTATCTGCGGCTTTGACCGACTCGTTGAC 211847 32 100.0 33 ................................ TTCATCTGGAAGGGTAATGCGCAACGCCCTCGA 211782 32 100.0 36 ................................ CATATGGGTGGCTACTGATAGACAAGGAAACAGGCT 211714 32 100.0 34 ................................ ACCGTTATCTACTCGTTTACCACGGAATTTAATA 211648 32 100.0 35 ................................ ATATCTTCCACGTAAAAAGCTCCCTTCTAATGTTA 211581 32 100.0 36 ................................ CGGCAGACGCCTGGCCTACGTTGACCCTAAGATAAA 211513 32 100.0 36 ................................ CAAAAAATCGGGAACCCCTGCGGATTCAGACAAAAA 211445 32 100.0 32 ................................ ATCATAGTTCCAGGCATCGTATGTATACCAAA 211381 32 100.0 36 ................................ AGGCAAGATTTTAAGATTGTGTAAGGTCACAGTCAC 211313 32 100.0 36 ................................ ATACCATCGCTCCTTTTTTTTATTTTTTTGTTAATC 211245 32 100.0 33 ................................ ACACCATCCAAGCTCCTCACCTCAGCCTGGAAG 211180 32 96.9 33 ..............A................. ATTGCTGTTCACCTCCCCTCTTTGATAAAAGTA 211115 32 100.0 34 ................................ AGCCGCCTTGACTGCACGCTGGATTAGGCGCTCA 211049 32 100.0 37 ................................ ACGAGACTCAAATTCATTAGCTATGATCCGCGCAATC 210980 32 100.0 37 ................................ ATTGAAAAAAGCTGTTGTTTTATTATCTGGAGGTCCA 210911 32 100.0 37 ................................ TTAACGGTTCTAATGATACTGCGCTTTTTACCTTCTT 210842 32 100.0 34 ................................ TCCAAACACTGCATCTCTAATGAGTACAAACAGA 210776 32 100.0 37 ................................ TTCCACCAGGTCAGCAAACGGAAAGAACTCTGTCATG 210707 32 100.0 35 ................................ ACGCTTTGGATATCAGAGCGGCACAACAAATCTAT 210640 32 100.0 33 ................................ TCCAACGAGATAAAGAGGTGTCAGCGGTTGCTA 210575 32 100.0 36 ................................ TTTTCAGGGATGCAAGGGTACAAGAATGGTTTGAAT 210507 32 100.0 37 ................................ CCTCCGCGTTTTGGTCAGACGGCGCAGCCCTGTAAAC 210438 32 100.0 34 ................................ AAAGTGGAAAACACTACAAAAAAACTGTATACGA 210372 32 96.9 35 ............................G... TTCTGTTCCTTGAAAAGCGAGATTGATAGAGTTGT 210305 32 81.2 40 ........T...A...A...A.AT........ CGTCCAAAACAAGAGATAACCAGAGCAGAATCTGCGGTCG 210233 32 71.9 0 ...AT.....G.A.T..A.T.......A.T.. | ========== ====== ====== ====== ================================ ======================================== ================== 27 32 98.0 35 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : AGTTCCGTATTCGTGTGAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTACCATCCCCGTCAAGTTTCCCGAAGGAGGGCAACCGTTGGCTGATGGGCCGGGTCAACCCGAGCAGGTAGCTGATTTGGTGACATTTTTGGCTTCTGATCATTCGCGTCACATTACTGGTGCACAAATTGTAATTGATGGGGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATTCTCTGGGACAGAGAAATGTTTTGTGGTATCCTGAGTGTATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTGGCATCGTTTTTTTCGAAAATGCATGGAATTGATATCATTAGGGTATGAATTCCTTCATTTTCGCT # Right flank : ATATAAAGTCCGCTCAGTGAGGTTCAAACAGAAGAAACGGGCAGCATTCAAATAGAATCTTCAGGAAGCTCAAGATAACAGCGAGGGAAACTCGCGTCTTACATTTAAATTCTATCCTGTAGATATTATGAATCCTCAGAGGAAAGACTCTGGGGATTTTTAATTTTTGTAGAGGACGAATAAAAGAGCGGTACATGCTCCTTCTCTATGAATAGTACCGCGCTGCTACAAGTTTTTTTATGTTAGTCAATTTATCTGTTAATTTGATTTTTTTAGGAGGTATTTGTCATTGGAAGTCGAAATAAGGTAAAAGTAAATAAGTCTTTATTCCTTTTTTTGTTATTTTGTTAGTAAATAAGACTTGGTTCAGGAGGCACTTTAAATGAAATATATAGCTCACATTCGTCAGAAAGACGGACGTATTCAGACAGTGAGAGATCATCTACAGGAAGTGAAAGAGAGTTGTGAGCATTATGGAGGGAAAATTGGTGTCGGTCATT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //