Array 1 4606694-4601784 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029254.1 Streptomyces spongiicola strain HNM0071 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 4606693 29 100.0 32 ............................. CAGTGCGGCCCCCGACGGCGGGTCTCTTCCAG 4606632 29 100.0 32 ............................. ATGGTTTGGTCCGGCGGACGGGTCCGGGTGAA 4606571 29 100.0 32 ............................. GTCTCGCCTCGCAGGATCGCCCCCGCCCCCGC 4606510 29 96.6 32 ............................T CACCACAGAGCGGATCGCGGACCGGTACGAGG 4606449 29 100.0 32 ............................. CCTCCGCCGGGGGGTTGCATGACCCCAAGGGA 4606388 29 100.0 32 ............................. GACGTGGCCCCGGCCGGCCCGATCTTCATGGA 4606327 29 100.0 32 ............................. TTGGCGCTGGCGAAGCTGATGACGCGCGGGAG 4606266 29 100.0 32 ............................. AGATGCTCGGCTTGGGAGTACATCTGCTGTGG 4606205 29 100.0 42 ............................. GCCCGTAGGGCGTAAGGGGCCCGAAGGGCTAGGACCCCCTAC 4606134 29 100.0 32 ............................. GGGCTGATCGTCTTCCCGACAGGCCGGGCCAT 4606073 29 100.0 32 ............................. GTCCCGACGGCCCGGTTATCCACAGGCCCTCG 4606012 29 100.0 32 ............................. ACGGGCGGGACCGCCGGCAGTTTGCGGGTTTC 4605951 29 100.0 32 ............................. TGCCGCCGCCGGGCGGGGCCGAGAGAGCCAAC 4605890 29 100.0 32 ............................. CAGCTGGTGGCGTCGGACCGATGGAGCTACAC 4605829 29 100.0 32 ............................. ACGGGTCCGGCCCCGGTCGAAACGCAGCCCTA 4605768 29 100.0 32 ............................. TTGCCCAAGTTCGCGACCGGCCGGGAGACCTT 4605707 29 100.0 32 ............................. ACGGGCGGGGTTCCCGGCAGTTTGCGGGTTTC 4605646 29 100.0 32 ............................. GGCGGGCGGTGGTCCCTCAGCGCGCAGCGCAC 4605585 29 100.0 32 ............................. TCGGGCTGAACCACACCACGGTGATGGAGCGG 4605524 29 100.0 32 ............................. TACCTGTCGTCCTACGCGGAGCCGCGCGCCAT 4605463 29 100.0 30 ............................. ATCGAGATGTCCGCGGGGAAGTTGGTCCCC 4605404 29 100.0 32 ............................. GCCACCCGGTCACCCGCGCCGGCCGCGGCGTC 4605343 29 100.0 32 ............................. AGCCGGAGCACTCCCGCGGTGGTGCCATCGAC 4605282 29 100.0 32 ............................. AGTGGAGTAACCCCATGGATCAGCTTCTCGCC 4605221 29 100.0 32 ............................. CCCCGCAGGACGTTCAACGCCGACCGCGCGAA 4605160 29 100.0 32 ............................. CAGTGCTCGCACCTGTTCCTGTACCGCACGAC 4605099 29 100.0 32 ............................. TACGTCGGCCCGCTGCCCCTGTGGGCGTCCGA 4605038 29 100.0 32 ............................. CTATGCACCGGCTCGGGCACGTCGATGCTCGA 4604977 29 100.0 32 ............................. CGGGTGAATCCCGACGTGCGCAAGTTCCTGCC 4604916 29 100.0 32 ............................. TTCGGCAGGGTCGGCGCGGTCAGCTGGCCGCC 4604855 29 96.6 32 ............................G CGTCCAGAAGGTGTACAGGCCGTGATCCTCGG 4604794 29 100.0 32 ............................. TTCCGTACAGCGGACCCGAGTTGGGGAGATCA 4604733 29 100.0 32 ............................. GTCAGCAGGTACGCGCTGCTGCCCGCCCCGTC 4604672 29 96.6 32 ...............A............. GCGCCGGAGCGCGGGCCGGCCGGAGGCCGGCG 4604611 29 100.0 32 ............................. GGGTCGCACTCACTTGCACTGAGGGAGCACGA 4604550 29 100.0 32 ............................. AGCGGCGGATCTTCAACGGCCGTGTCCAGCTG 4604489 29 96.6 32 ............................T TCCCGGCCGGAGAGGGCGGGAAGTGGACCGCC 4604428 29 100.0 32 ............................. GTCACCCCCGAGGCGCGCGACATCCTCCGGCT 4604367 29 100.0 31 ............................. CAGCGGGCCCGGCCCGCCCCGGCCCGCGCGG 4604307 29 100.0 32 ............................. CGATGCCTACTCGACGCCCACGCCATGGGTGG 4604246 29 100.0 32 ............................. TGGAGAGGGATCGTCAGGGCGTCCGGGCCGAC 4604185 29 100.0 32 ............................. GGCCTGATCGTCTTCCCGACGAACCGGGCCAT 4604124 29 100.0 32 ............................. CGGCAACGTCGCGGTCCGGGCCTTCCTGTGCA 4604063 29 100.0 32 ............................. TACTGAGCGATGACCGGGTAAACACCCTCCGT 4604002 29 100.0 32 ............................. GAGGTCCGCCTGATCGGGCAGGGCGCGGGCAA 4603941 29 100.0 26 ............................. CCGCGCAGGACGTTCAACGCGGACCG 4603886 29 100.0 32 ............................. CAGTACGGCCCCCGCCGCTTGGTCTCGTCCAG 4603825 29 100.0 32 ............................. GTCGCCGAGGAGAGCGCCGCCACAAACGCTGC 4603764 29 100.0 32 ............................. GGACTCGACGGCGCCCGCGCATGGGCCTGGCC 4603703 29 100.0 32 ............................. CGCCGTCCCGGGACCGGCCGGTAGCCGCTGCT 4603642 29 100.0 32 ............................. CGGTTGACGTACCGGCCCCCTCCGGTGACGTT 4603581 29 100.0 32 ............................. TGAAATGCCATGGCCGTGCCCAGCGTGTGCGC 4603520 29 100.0 32 ............................. GGCACGGATGCCGGAGTGGGGGGCCAGGGAGG 4603459 29 100.0 32 ............................. CACCGACCGGGCGACCCACACGCCTGGTCACC 4603398 29 100.0 32 ............................. GCGTCCGGGTGACGATCAAGAACCTCTGGGAG 4603337 29 100.0 32 ............................. GAGGTGTGGAAGTTCACCCGGCCGCGCCTGTC 4603276 29 100.0 32 ............................. CAGTTCATCGGCCTCTTCCGCGGCCAGTTCGG 4603215 29 100.0 32 ............................. CTCCGCACCGGGAACACCGCGGCGGCCGCGGC 4603154 29 100.0 32 ............................. TGCCGCCGCCGGGCGGGGCCGAGAGAGCCGAG 4603093 29 100.0 32 ............................. GGCTGCTGTACGCGGGCCGTGACCTGGTGCTG 4603032 29 100.0 32 ............................. CTCGCCATCAAGGGCGTCTACCAGAACATCGG 4602971 29 100.0 32 ............................. GGGCCGTCCGGGAGCGCCCGCCTGGTCAACGT 4602910 29 100.0 32 ............................. CACTACACCCACGACACCTCAAGGGGTAACCG 4602849 29 100.0 32 ............................. GCGATCGTGGCCACGTCCGAACCGGAGAACGT 4602788 29 100.0 32 ............................. ACGAGCGAGGAGAGGCGGAACTTCTCGTGGGT 4602727 29 100.0 32 ............................. CTGCCGTACCGGGGCAAGGTCTACTCGGTGCC 4602666 29 100.0 32 ............................. GTGTCCGTGGCAAATTTCTCCACGTAGAGGTT 4602605 29 100.0 32 ............................. CCCTATCGGCTCACGTCGCCGTCCCGCGTGCT 4602544 29 100.0 33 ............................. CCTTGCCGGTGGTGTGGCAGTGGTCGATGACCA 4602482 29 100.0 32 ............................. AGCGGGGAGGTCGCTCCGGTGACCGTGGACAG 4602421 29 100.0 32 ............................. GCCGTAAAATCGTGCGTTACCGTCCACGCTGG 4602360 29 100.0 32 ............................. GCCTCCGCGTCCGACACTTCCTTGTGCCAGTG 4602299 29 100.0 32 ............................. ACCAAGGCGTGTGGGGTGATCAGAAACGTCAA 4602238 29 100.0 32 ............................. CCGGCCGAGCCGGTGACGAGAGCGGTCTTCAT 4602177 29 100.0 32 ............................. ATTGAGGACTCCAGCTCGTACGACTCCGACGG 4602116 29 100.0 32 ............................. TGGTCGTCGAACACGGCCCGTGCGCGATCGTC 4602055 29 100.0 32 ............................. CCACCACGAGAGGGGGGCCCGATGGGCCTGTT 4601994 29 96.6 31 ............................G GGGGCGGTGTCGCCGGGGGGCTCCGCCGGGA 4601934 29 100.0 32 ............................. AGGGTGCTGGTGATGTGGAGGGCGCCGTTTCC 4601873 29 100.0 32 ............................. GGCGGATCCCAGAAGGGCTCCTCCAACGGCAA 4601812 29 75.9 0 .....................CC.ACATG | ========== ====== ====== ====== ============================= ========================================== ================== 81 29 99.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGACAGGCGAACGCCGGGGTTGCCTTGCCGATGTCGTGCACAGCGGCCAGCCAACCGACGAGGGCCCGCGCGTCCGAATCACCGCGCGGCAACGCCTCGGCGACCAGCCCCCTCACGCCCGCGGGCAGCCACCGGTCCCACAACAGGCGAGCCACCTCGGCGCTGTCCTCCATATGCCGCCACAGCGGCAACCAACCGTCGGTGTCGCGGTCATGCTTGGCCCACACCGACCGTGCCGGGTCCCCGAGCCGGGGCAGCATGCCGAGACGGGTACGCTCCCCGTTGCTCATGCAGAGATTGATACATGCACGGCCGGGCTCCGCGCACGGAAATGGGTAAACGCAGTCATCCAGGTGATATCGGCTGGTATACCGATCCTCTGACACCCGGTCTGCCAGGCCATCGGAACCGAAGGAATGCCCCGAATGACCTATCTGCCCGACTCCGCAGAAGTAGGTCGAACGGGGCCTGCGCTGCGGTGAACTACCAGGTCAACGAGT # Right flank : CCCGGGCGCCGACGCGCCCCGCGCGCCGAAGGGCGCGCCGGGCGCATGGGGCGCCTCGCTGTCAGTCCTGGTGCAGCGCGCCCCAGAACTCGTCGAAGGTCAGCAGGCCGTCGCCGTTGGCGTCCTTGGACTTGATGACCGCCTCCGCGACCGTCTCGGTCACGTGGAAGTCGCCCAGCTGCGCCATGGCGCTCTTGTACTCGGCGGCCGAGATCAGCCCGTCGCCGTTCAGGTCGAATCGATCGAAAGCCTTGCGTGCCGACTCGATGTCCGCCACAGCCCACCCCTTCTCGGTGCATTACTGACGCCGGCCAGGTTATCGGCGGAGGGGCGGTCCGGCCGGCGGGGGCCGCGGGGGTCGACGGGGCCGACGGCGCGGACGGCGCGGACGGGGGTCTTCGGGCGTGCGCGGGGCGTCGGGGAGGATGGGTGTATGAGCGACGCGGTGGCACGGATACTGGAGGCGGCGGCACGGGACGAGTTCCCGCCGCCGGACGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4616619-4619881 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029254.1 Streptomyces spongiicola strain HNM0071 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4616619 29 100.0 32 ............................. TGATATCCGAGCCACGTTTTCCCGCACCCCGT 4616680 29 100.0 32 ............................. CCGCTGGCAGATGCGGTAGTGCGCAGTAAGCG 4616741 29 100.0 32 ............................. GTGAACGCCACACGGCAGATCGTTGACGCGCT 4616802 29 100.0 32 ............................. CTGTACGCGGGACTCGACGTAATCCTGACCGC 4616863 29 100.0 32 ............................. CGCCGTGCTTGACGAAAATCATCAGTTCCCAG 4616924 29 100.0 32 ............................. GTCCGGGCATTCCAGCGCGCGCAGAGGTGGAA 4616985 29 100.0 32 ............................. TCGGAGCCACCCACCTACCGCGCCATCTGCGG 4617046 29 100.0 32 ............................. CGCCTGGCGGCCCCGGCCGAGCCGATCGGGCT 4617107 29 100.0 32 ............................. GAACACCGTCGCGCGCTCCACCCACGTCCGGG 4617168 29 100.0 32 ............................. GACCTTGCGGCTCTGCGCGGTGCCCGATTTGT 4617229 29 100.0 32 ............................. ACGATCTGATAGCGGTTGTCAGCGCTGGTCAT 4617290 29 100.0 32 ............................. CCGGTCGGGCGGTGGACGCAGGGCGAGGGCGA 4617351 29 100.0 32 ............................. GGACGCCACCGGCTTTCATCTGTTCTGGTTCG 4617412 29 100.0 32 ............................. GGCGGGAAGTCGAGCACGTTGCCAAACTCCCC 4617473 29 96.6 32 ............................G GCGAGTCCCGGCACCAGGTCGGCTCCGGTGAG 4617534 29 96.6 32 ............................T CGGATCTTGGCCTGGTCGATGACGATGCGCTG 4617595 29 100.0 32 ............................. AAGTGGTTCGGGTACAACCTCGGGGACCCGAA 4617656 29 100.0 32 ............................. CAGGCCGGATACCAGCTCGCTGCCGGGCTGCC 4617717 29 96.6 32 ............................T CCGCCGCCCAACGGCTTCCAGGCGCTGAGCCA 4617778 29 100.0 32 ............................. TCGGCGACAAGGGCAAGCGCGCGCTCGCGTCG 4617839 29 100.0 32 ............................. GGCGCGTTTGTCATCACGCTGGACAGTAGTAC 4617900 29 100.0 32 ............................. TGTGCTCGCTGTGCACGAGACATCTCTAGCTG 4617961 29 100.0 32 ............................. ATCACCAACGACATCGAGCGCGCGCTCCTCTG 4618022 29 100.0 32 ............................. GCCGGCATCCTCGAACCCCGGGTCGACCGCGG 4618083 29 100.0 32 ............................. GCGCGGCTGCGGGCGCGCGTGGCGGAGCTGGA 4618144 29 100.0 32 ............................. CGCCACCAGGGCGACCGTTGCCCACTCGGTGG 4618205 29 96.6 32 ............................T CATGTGGCCGCTCCTCGGGCAGGTCGTCCCGT 4618266 29 100.0 32 ............................. ACGGCCAGGTGGTGCTCGCCGGGGGCACACAT 4618327 29 100.0 32 ............................. TCTAAGGCCGCGCTGGAGGAGTTCAAGCGGAA 4618388 29 100.0 32 ............................. TGTCCCGGCAGGGCAGGCAGATCGACGGGCTA 4618449 29 100.0 32 ............................. GTCCTGCACCATCTGCCACCGGTCCGTCGACG 4618510 29 100.0 32 ............................. GGCCGCTTATCGACCGTACAGCCCCTTAGTGG 4618571 29 100.0 32 ............................. TCCATGTACGCGTCCGGGGACCCGTGCGAGGT 4618632 29 100.0 32 ............................. GGGATGGACCGCGTCTACCTGAACCACTTCGC 4618693 29 100.0 32 ............................. GCGCTCGGGACCACAGGGTGACCAACTCCGGT 4618754 29 100.0 32 ............................. CGGACCGGTGCCGACTGCCGCCCGGTCGACCG 4618815 29 100.0 32 ............................. TCCAGCGTCACGTACTCCAGCGTCACGGGGTT 4618876 29 100.0 32 ............................. GTGCACGTGATCCGCTCCCACGCGTCGTTCAG 4618937 29 100.0 32 ............................. ACCTGCAACAGCGGATCCGGGGCGTCCCAGCA 4618998 29 100.0 32 ............................. GACGATTTCGGCACCGCCGTCGCCCTGTTCGA 4619059 29 100.0 32 ............................. GGGTCGGGGAATTCGGAATCCCCCTGCTGTCG 4619120 29 100.0 32 ............................. GTCATCACTTCACGCGGCAGGGAAGCGACGCA 4619181 29 100.0 32 ............................. GCGTGGGGCGACTCCGTCGAGACGGTGAACCT 4619242 29 100.0 32 ............................. GAGATCCGCACCCGCGGAGGCCACTGGACCGC 4619303 29 100.0 32 ............................. GGGATCGGGCAGAACGGCGGCCAGGAGACGGA 4619364 29 100.0 32 ............................. AGTCGCATATTCCACTACAGGGCTGTACGGTC 4619425 29 100.0 32 ............................. CTGATCTATGCCGCGGGCACCACGGTGCTCCC 4619486 29 100.0 32 ............................. GACACGATGGTGCTGCGCAACGGGTTCGTCGG 4619547 29 100.0 32 ............................. GACACGATGGTGCTGCGCAACGGGTTCGTCGG 4619608 29 100.0 32 ............................. TTCGGCCACAACACGATGCGTTGCGACTTCGC 4619669 29 100.0 33 ............................. ATGTAGCCCAGGAACGGCTCGATCTCCCGGCCG 4619731 29 100.0 32 ............................. GAGATGCGGCCGAGGTTGTCCAGCTCGATGCG 4619792 29 100.0 32 ............................. AAGGCGTCTTCGGCTGGAGGGTTGCTCAGATC 4619853 29 93.1 0 .......................C...T. | ========== ====== ====== ====== ============================= ================================= ================== 54 29 99.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GGCGTCAACTACGGCGGAGGGGACGACTACGGAGAGTCGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCCGCCGGTCTGCGTGGCTTCCTGACACGCTGGCTGCTGGAGATCTCCGCGGGCGTGTTCGTGGGCAACCCCTCCGCCAGAATCCGCGACCTGCTCTGGGAAGAAGTCCGGCAGTTCGCGAACCAGGGCCGTGCCCTGCTGGCCCACACCACGAACAACGAGCAGGGCTTCACTTTCCGCACCCACGACCACGCGTGGCACCCGACCGACCTCGAAGGAGCCACCCTTATCCGCCGCCCCGACCCGACCGCACCGCCCCCGGCGGCGACTCCCCGCAGCGAACCGCCATCGGGCTGGAGCAGGGCCGCCAAACGCCGCCGCTTCGGCAGGAGCTGACGCCACATCATGACCCACATGCCGGATTCGCCGGAAACTGCGAAAGTCCCCGGAAACCGCCCCCGCCGCCGCTAAACCCCCAGCTCAACCAGT # Right flank : CACCCCTGCCGGCTCCGTGCCCGCCCCGCTCCCGGGCTCCCCGGCTCCCGTGCCCGGAGGGCCCGTGTCAGCACTCGATGATGTTGACCGCCAGTCCGCCGCGCGCGGTCTCCTTGTACTTCACGGACATGTCCGCGCCGGTGTCCTTCATGGTCTTGATGACCTTGTCGAGGGAGACCTTGTGGCTGCCGTCGCCGCGCAGCGCCATCCGTGCGGCGGTGACGGCCTTCACCGCGGCCATGCCGTTGCGCTCGATGCACGGGATCTGGACGAGCCCGCCGACCGGGTCGCAGGTGAGGCCGAGGTTGTGCTCCATGCCGATCTCGGCGGCGTTCTCGACCTGTTCCGGGGAGCCGCCCATCACCTCGGCGAGCGCGCCCGCGGCCATCGAGCAGGCCGAGCCGACCTCGCCCTGGCAGCCGACCTCGGCGCCGGAGATGGAGGCGTTCTCCTTGAAGAGCATGCCGATCGCGCCGGCCGCGAGCAGGAAGCGGATCACT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 6930430-6930699 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029254.1 Streptomyces spongiicola strain HNM0071 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 6930430 24 100.0 39 ........................ TGGTCTCCTGGGCGTCGGCCATGCGCTTGTTGAGGGGGA 6930493 24 95.8 37 ....C................... GCCCTCTCAGCTCACTTGGCCGGGCCCGGCAGCGGGA 6930554 24 95.8 37 ....C................... GATCACCGAAGTGGTCGAGGCCATCCGGCCTGCCATG 6930615 24 100.0 37 ........................ GGCAGCAGCTGGTCGGCAAGGGCATGGGCTCCCCGTG 6930676 24 87.5 0 ..G................G.C.. | ========== ====== ====== ====== ======================== ======================================= ================== 5 24 95.8 38 GCACACCCGCGCACGCGAGACGCC # Left flank : CGGGACGCGATCCGCGGCGCTCCCCGGCCGGGCGACTGCGAGCGCCACCGAGCGCCACCGGGCGCCACCGGGCGTCTGCGGGGCGCGGCGGGCGTCTGCGGGATGCGGCGGGCGTCTGCGGGATGCGGCGGGCGTCTGCGGGATGCGGCGGGCGTCTGCGGGATGCGGCGGGCGCGCCGACGGCCCACGCCTCCGCGCTGCCCTGCCGACCGCAGGCGGCTCCGCAGCTGAGCGGCACGGCCGTCGCGCCGGCCGTCGGCGAGGCGCATACGGAGCGGTGAGCGTGGGCCTGCTGCCCGCGGCCCGTGGTCGCCGCGGTGCCTTCGACGGCACGGGAGTGGGCACGGGAGCGGGCACGGCGGCCCCGGGTGTTCATCCGCCCGACGGAACCGGCCAGCAGGCCCGGGCCCCGCCGTCCGGCGGTCCGCGGGCCGCCGGGGCCCGGACGGGTGCCACCCGGTCCCGGCCGGCCGCCGCGAAGGCGAGCGCATGCCGAGGGA # Right flank : CGGCCGCCGATGGCCGGGCGCCGCTCCGCCGGCGGCGCTCGCCTCGCGGAACCACGCGAGGTCGCGCAGCGTGGATGACGGGGTCCGCGAGAAAGGTGGAAGGGCATGAGCACGAGCGATCCGGCTCCCCGCGTGGTCGTGGGCATCGACGGCTCGCCCTCTTCGTACGCCGCGCTGCGCTGGGCCGTCCGGCACGCCGGGCTGATCGGAGCGACGGTGGACGCGGTCGCCGCGTACGAGCTGCCGGGCGCGCACGGCTGGTCGGCCCCCGCGGTCGACACGGAGTTCGACGCCGGGGAGGCCAAGCGCGGCCTCAGGGAGGAGGTGCGCAAGGTCCTCGGCGAGACGGGCGAGACCCGGGTCCACGAGCGGCTGGTGCACGGCAACCCGGCCGAGGCCCTGATGGCCGCCGCCGAGGGGGCCGAACTCCTGGTGGTGGGCTCCCGGGGGCGCGGCGGGTTCGCCCGGATGCTCCTCGGCTCGGTGAGCCAGCAGGTCAG # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCACACCCGCGCACGCGAGACGCC # Alternate repeat : GCACCCCCGCGCACGCGAGACGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [18.3-15.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //