Array 1 26856-28205 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDO01000064.1 Acinetobacter baumannii strain LS066 G-1206G0404-13-LS066-contig_64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 26856 30 100.0 30 .............................. CATGCACCTGGTGGAAAAAAGGATGGCTTA 26916 30 96.7 30 ............................A. TTTAGAAACATCACGATTAAAGTGATCTTT 26976 30 96.7 30 .............................G TCAACAAGCAGTATTCAAACAACACTGTGA 27036 30 100.0 30 .............................. CCACGCACTTGTTGGCGCGGTCCCAGTTGC 27096 30 100.0 30 .............................. TAAAAGGTCTTGACGCACAGCATCCCAATT 27156 30 93.3 30 ............................AG TAGCTAAGAATTATCACCCTCCAGTGGTTG 27216 30 96.7 30 ............................A. ATCCACAAATATTACATATGGTAATGGGGC 27276 30 93.3 30 ............................AC CAACAACAAGAATATTTTTTCGTTCTTTTA 27336 30 96.7 30 ............................A. AGAAAACCACATCAGCCCACATTGCCAATC 27396 30 93.3 30 ............................GA CTTCTTGTGCAATTTGATCTTTCGTATTTT 27456 30 100.0 30 .............................. ATTGATTCAATGTAAAGAACAGGTCTACAG 27516 30 93.3 30 ............................AA AAAGATCAGTATTATCTGTCACAGGCTGCA 27576 30 93.3 30 ............................AC AAAAAATAATTACCGAGTTCAGCTTTAGCC 27636 30 93.3 30 ..................T..........C TTGCCCCTGTGTGCTTTGATTTGGAAGTGT 27696 30 90.0 30 ...T........................AG CCCCGCACAAGATTACATAGACAAAGTGCT 27756 30 100.0 30 .............................. CAACAGGTACGGGTTCAGGTACTGGTGATC 27816 30 93.3 30 ............................AG TCGTTAGACGAATATGCGTCTTGTTTAGAA 27876 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 27936 30 93.3 30 ...........T.C................ TGCTAAAACGATTTATGCTTTAAAATACTT 27996 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 28056 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 28116 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 28176 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== ============================== ================== 23 30 93.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCTCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTGAAAGTTCAATAAAATCAATAAGTTATAATGTGTCTTTTTTTGATTGGGTAAAATTCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //