Array 1 308-13 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BAGE01000115.1 Nocardia paucivorans NBRC 100373, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==============================	=====================================	==================
       307	    30	 100.0	    37	..............................	CCGAAGCGCTGCCGTATCGCGCGCACCGCCCGCCGGA	
       240	    30	 100.0	    36	..............................	AAGGTGATCACCTCCGGCACCGGCGCGGGAACCGGG 	
       174	    30	 100.0	    37	..............................	GCGATATCGGTTCGGGAGGTGTCGGGGTCGTTGCGAC	
       107	    30	 100.0	    35	..............................	GCGGCGGCCAGCGGCGGTATCCCGAGTTCGTACAG  	
        42	    30	 100.0	     0	..............................	|                                    	
==========	======	======	======	==============================	=====================================	==================
         5	    30	 100.0	    36	GTCCTCATCGGCCCTACGAGGGTTGGCAAC	                                     	       

# Left flank :   ACCCATCGCACCCTCAAACGCAAAGTCGCCTACGAAGAACTGATCTACCTCGACGCCCTCAAACTGACCCGCACCGCGCTCGAAGAAACACCGTACACGCCGTTCCGGATCTGGTGGTGACCATGTACGTCATCGTCGTCTACGACACCGCCGTCGAACGAAATCCTGTCGTCCTACGCACCTGCCGCCGATACCTACACCATGTGCAACGCAGCGTATTCGAAGGTGATCTCAGCCCGGCCCAGTACCGACACTTCCGCGCAACCGTCGAGACGGCCATCGACCGCACCTACGACAGCGTCCTGGTCTACACCTACCCACCAGGCGCGAACCCACAGCGCGAATCCTGGGGAACCACCCAGCCCGCACCATCGACGATCATCTGACAACAAGATCATTGCAGCGACACGCCGAACACATCGACACTACCAGCAGTCCACTGCAGATCACCCCCGAAAGTCACCCTTCGATAAAGCCTTTACCAGCGGCTTTACCGTGGG
# Right flank :  CTCGAAGGTAAGC

# Questionable array : NO	 Score: 3.06
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCTCATCGGCCCTACGAGGGTTGGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-3.90,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [10.0-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.64   Confidence: LOW] 

# Array family : NA
//


Array 1 42-343 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BAGE01000040.1 Nocardia paucivorans NBRC 100373, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	===============================	======================================	==================
        42	    31	 100.0	    37	...............................	CTGGTGCTCATCTGCTGTACCTCTTTCGTTTGTGACG 	
       110	    31	 100.0	    35	...............................	ACCAGGCGCACCAGCGCGCGTTCCATGTGGAGACC   	
       176	    31	  96.8	    37	C..............................	AGGATGGTCAGCCGGACCCGGGCACCGATGGCGGTGG 	
       244	    31	 100.0	    38	...............................	GACCGGAGTGCTCACTCGCATCCGCGACGAACTGCTGC	
       313	    31	 100.0	     0	...............................	|                                     	
==========	======	======	======	===============================	======================================	==================
         5	    31	  99.4	    37	GGTCCTCATCGGCCCTACGAGGGTTGGCAAC	                                      	       

# Left flank :   GCAACCTGGCTTTGCCGTGTGGTTGGGGCAGTCCGGGGATTG
# Right flank :  CAGTCCGGACCTTCGGACCCGAGTCCGGGGTCCTCATCGGCTCGCTCACCCGAATCTCCCTACGGTTCAATGGTTCCGAGTGCCAAGCATCTCCGTCAGTTTTATACACAGGATTGATACAGAGAGGATTCGTTACCGAGATAGACCCATCAAAGGTGGCGCGTGGACCGGTGTTGCGGTTTCATGGTTATAGGGAGAATCAGCAGGCAGGACCTGAAGGCGGTGTCCTATGCCCCATCTCCTCGATCATCGGTTTAGCCCCGACGCTCTGGCAGTAAGCTCAGCTCGGCCAGAGCATGAGACCTCAAGTATCAGGCGCCGTCAACGCACCACCCTATCGGCGGCTGCATACGGGCCGATACGACGGAATTATCGGGTCAGCGAGAGGCGCACCGTCTCGTATCCGGCTGTTGCGATCCCTTCTGGAGCCCCCTGGTGACCGGCCAAGCTCCGGGAAATGAGGGTCCATCGGCCACTGATGAACCCGGAATGCCGCAATG

# Questionable array : NO	 Score: 3.03
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGTCCTCATCGGCCCTACGAGGGTTGGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-3.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [25.0-33.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//